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The map label for this gene is lpqB

Identifier: 41409456

GI number: 41409456

Start: 3729414

End: 3731171

Strand: Reverse

Name: lpqB

Synonym: MAP3358c

Alternate gene names: 41409456

Gene position: 3731171-3729414 (Counterclockwise)

Preceding gene: 41409457

Following gene: 41409455

Centisome position: 77.25

GC content: 71.73

Gene sequence:

>1758_bases
ATGGGGCGTAAGCTCCTGGGCCTGCTGATGCTGGCCGTGCTGCTCGCCGGCTGCGCCGGGGTGCCCAGTTCGTCGGCGCC
GCAAGCCATCGGCACCGTCGAGCGGCCGGCGCCGTCGAACCTGCCCAAGCCCACCCCGGGCATGGACCCCGACGTGTTGC
TGCGCGAATTCCTCAAGGCCACAGCCGATCCCGCGAACCGGCATCTGGCGGCGCGCCAGTTCCTCACCCAGTCGGCGTCC
AACGCCTGGGACGACGCCGGCAGCGCGCTGCTGATCGACCACGTCGTGTTCGTGGAAACCCGTGCGGCCGAACGTGTTTC
GGCGACCATGCGGGCCGACATCCTGGGTTCGCTGTCGGACATGGGGGTGTTCGAGACCGCCGAGGGGGTGTTGCCCGACC
CGGGGCCGATCGAGTTGGTCAAGACCTCCGGCGGCTGGCGGATCGACCGCCTGCCCAACGGGGTCTTCCTGGACTGGCAG
CAGTTCCAGGCCACCTACAAGCGCAACACGCTGTATTTCGCCGACCCGACCGGCAAGACCGTGGTGCCCGATCCGCGCTA
CGTCGCGGTGCCCGACCACGATCAGCTGGCCACCGAGCTGGTTTCCAAGCTGATCGCCGGGCCGCGGCCCGAGATGGCGC
ACACCGTGCGCAATCTGCTGGCCCCGCCGCTGCGGCTGCGCGGGCCGGTGACCCGGGCCGACGGCGGCAAGAGCGGGATC
GGACGGGGCTACGGCGGCGCGCGCATCGACCTGGAGAAGCTGTCCACCACCGATCCGCACAGCAGGCAATTGGTTGCGGC
ACAGATCATTTGGACCCTGGCCCGGGCCGATATCCGGGGCCCGTACGTGATCAACGCCGACGGCGCGCCGCTGGATGACC
GGTTCCGCGACGGCTGGACCACTTCCGACGTCGCCGCCACCGACCCCGGCGTCGCCGACGGCGCGGGTGCCGGGCTGCAT
GCCCTGGTGAACGGGTCACTGGTGTCGCTGGACGGGCAGCACACCGTCGTGGTGCCCGGGGCGTTCGGGCGGATGGGCGA
TCAGACCGGCGCCGCGCTGTCGCGCAACGGCCGCCAGGTGGCGTCGGTGGTGACGCTGCACCGCGGCGCCCCGGACATGG
CGGCCTCGTTGTGGATCGGTGATCTGGGCGCCGAGGCGGTGCAGTCCGCCGACGGGCACAGCCTGTCGCGGCCCACCTGG
TCGCTGGACGACGTGGTCTGGGTGGTGGTCGACGGCAACAACGTGCTGCGGGCGATCCAGGAGCCGGCGTCCGGGCAGCC
CGCCCGGCTGCCGGTGGACTCGGTGGCGGTGGCCACTCGGTTCCCGGGGCCGATCACCGACCTGCAGCTGTCCCGGGACA
GCACCCGCGCCGCGATGGTGATCGGCGGCCAGGTGATCCTGGCCAGCGTCGAGCAGACCCAGGCCGGCCAGTACGCCCTG
ACGTATCCGCGCCGGCTCGGTTTCGGGCTGGGCAATTCGGTGGTGTCGCTGTCCTGGCGCACCGGCGACGACATCGTGGT
GACTCGCACCGACTCCAGCCACCCGGTCTCCTACGTCAACCTCGACGGGGTCAACTCCGACGCCCCGCCGCACGGTGTGC
AGATGCCGGTGACGACGGTGGTGGCCAACCCGTCCACCGCCTATGTCGCGGGTCCCCAAGGGGTGCTGCAGTATTCGCCG
TCGGCGGACGGCCAGCAGGGCTGGTCGGAGGTGCCCGGGCTGACGGTGCCCGGCGCCGCACCGGTGCTGCCGGGCTAG

Upstream 100 bases:

>100_bases
TCCCGCAGCCGTCCCCGTCCGGTGGGCAGTCCCCGTCGACCGGCCCGCAACACGCGAAAGACCGTGCGCGCCAACGCGAG
CACGCCGAAAGGTCGCTGTG

Downstream 100 bases:

>100_bases
GAGCCTGCTGAATTAATTCCGCGTGGCGGGACGAGTTGTCCTGGGGTTTTGGGGATGATTGTTGGGTGCAGGGTCGCTCT
GATGATCAGCGTGAGTTGTT

Product: lipoprotein LpqB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 585; Mature: 584

Protein sequence:

>585_residues
MGRKLLGLLMLAVLLAGCAGVPSSSAPQAIGTVERPAPSNLPKPTPGMDPDVLLREFLKATADPANRHLAARQFLTQSAS
NAWDDAGSALLIDHVVFVETRAAERVSATMRADILGSLSDMGVFETAEGVLPDPGPIELVKTSGGWRIDRLPNGVFLDWQ
QFQATYKRNTLYFADPTGKTVVPDPRYVAVPDHDQLATELVSKLIAGPRPEMAHTVRNLLAPPLRLRGPVTRADGGKSGI
GRGYGGARIDLEKLSTTDPHSRQLVAAQIIWTLARADIRGPYVINADGAPLDDRFRDGWTTSDVAATDPGVADGAGAGLH
ALVNGSLVSLDGQHTVVVPGAFGRMGDQTGAALSRNGRQVASVVTLHRGAPDMAASLWIGDLGAEAVQSADGHSLSRPTW
SLDDVVWVVVDGNNVLRAIQEPASGQPARLPVDSVAVATRFPGPITDLQLSRDSTRAAMVIGGQVILASVEQTQAGQYAL
TYPRRLGFGLGNSVVSLSWRTGDDIVVTRTDSSHPVSYVNLDGVNSDAPPHGVQMPVTTVVANPSTAYVAGPQGVLQYSP
SADGQQGWSEVPGLTVPGAAPVLPG

Sequences:

>Translated_585_residues
MGRKLLGLLMLAVLLAGCAGVPSSSAPQAIGTVERPAPSNLPKPTPGMDPDVLLREFLKATADPANRHLAARQFLTQSAS
NAWDDAGSALLIDHVVFVETRAAERVSATMRADILGSLSDMGVFETAEGVLPDPGPIELVKTSGGWRIDRLPNGVFLDWQ
QFQATYKRNTLYFADPTGKTVVPDPRYVAVPDHDQLATELVSKLIAGPRPEMAHTVRNLLAPPLRLRGPVTRADGGKSGI
GRGYGGARIDLEKLSTTDPHSRQLVAAQIIWTLARADIRGPYVINADGAPLDDRFRDGWTTSDVAATDPGVADGAGAGLH
ALVNGSLVSLDGQHTVVVPGAFGRMGDQTGAALSRNGRQVASVVTLHRGAPDMAASLWIGDLGAEAVQSADGHSLSRPTW
SLDDVVWVVVDGNNVLRAIQEPASGQPARLPVDSVAVATRFPGPITDLQLSRDSTRAAMVIGGQVILASVEQTQAGQYAL
TYPRRLGFGLGNSVVSLSWRTGDDIVVTRTDSSHPVSYVNLDGVNSDAPPHGVQMPVTTVVANPSTAYVAGPQGVLQYSP
SADGQQGWSEVPGLTVPGAAPVLPG
>Mature_584_residues
GRKLLGLLMLAVLLAGCAGVPSSSAPQAIGTVERPAPSNLPKPTPGMDPDVLLREFLKATADPANRHLAARQFLTQSASN
AWDDAGSALLIDHVVFVETRAAERVSATMRADILGSLSDMGVFETAEGVLPDPGPIELVKTSGGWRIDRLPNGVFLDWQQ
FQATYKRNTLYFADPTGKTVVPDPRYVAVPDHDQLATELVSKLIAGPRPEMAHTVRNLLAPPLRLRGPVTRADGGKSGIG
RGYGGARIDLEKLSTTDPHSRQLVAAQIIWTLARADIRGPYVINADGAPLDDRFRDGWTTSDVAATDPGVADGAGAGLHA
LVNGSLVSLDGQHTVVVPGAFGRMGDQTGAALSRNGRQVASVVTLHRGAPDMAASLWIGDLGAEAVQSADGHSLSRPTWS
LDDVVWVVVDGNNVLRAIQEPASGQPARLPVDSVAVATRFPGPITDLQLSRDSTRAAMVIGGQVILASVEQTQAGQYALT
YPRRLGFGLGNSVVSLSWRTGDDIVVTRTDSSHPVSYVNLDGVNSDAPPHGVQMPVTTVVANPSTAYVAGPQGVLQYSPS
ADGQQGWSEVPGLTVPGAAPVLPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lpqB lipoprotein family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LPQB1_MYCPA (Q73UK8)

Other databases:

- EMBL:   AE016958
- RefSeq:   NP_962292.1
- EnsemblBacteria:   EBMYCT00000037957
- GeneID:   2717962
- GenomeReviews:   AE016958_GR
- KEGG:   mpa:MAP3358c
- NMPDR:   fig|262316.1.peg.3358
- GeneTree:   EBGT00050000017181
- HOGENOM:   HBG565340
- OMA:   WREVPGL
- ProtClustDB:   PRK13616
- HAMAP:   MF_01373
- InterPro:   IPR019606
- InterPro:   IPR018910
- SMART:   SM00909

Pfam domain/function: PF10646 Germane; PF10647 Gmad1

EC number: NA

Molecular weight: Translated: 61342; Mature: 61211

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRKLLGLLMLAVLLAGCAGVPSSSAPQAIGTVERPAPSNLPKPTPGMDPDVLLREFLKA
CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
TADPANRHLAARQFLTQSASNAWDDAGSALLIDHVVFVETRAAERVSATMRADILGSLSD
CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHH
MGVFETAEGVLPDPGPIELVKTSGGWRIDRLPNGVFLDWQQFQATYKRNTLYFADPTGKT
CCCHHCCCCCCCCCCCEEEEECCCCEEEECCCCCEEECHHHHHHHHHCCEEEEECCCCCE
VVPDPRYVAVPDHDQLATELVSKLIAGPRPEMAHTVRNLLAPPLRLRGPVTRADGGKSGI
ECCCCCEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHCCCCCCCCCCCCCC
GRGYGGARIDLEKLSTTDPHSRQLVAAQIIWTLARADIRGPYVINADGAPLDDRFRDGWT
CCCCCCCEEEHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHCCCCC
TSDVAATDPGVADGAGAGLHALVNGSLVSLDGQHTVVVPGAFGRMGDQTGAALSRNGRQV
CCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCEEEEECCCCCCCCCCCCHHHHCCCHHE
ASVVTLHRGAPDMAASLWIGDLGAEAVQSADGHSLSRPTWSLDDVVWVVVDGNNVLRAIQ
EHHHHHHCCCCCHHHHHEEHHCCHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH
EPASGQPARLPVDSVAVATRFPGPITDLQLSRDSTRAAMVIGGQVILASVEQTQAGQYAL
CCCCCCCCCCCHHHHHEEECCCCCCCCEEECCCCCCEEEEECCEEEEEEHHHCCCCCEEE
TYPRRLGFGLGNSVVSLSWRTGDDIVVTRTDSSHPVSYVNLDGVNSDAPPHGVQMPVTTV
ECHHHHCCCCCCCEEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEE
VANPSTAYVAGPQGVLQYSPSADGQQGWSEVPGLTVPGAAPVLPG
EECCCEEEEECCCCEEEECCCCCCCCCHHHCCCEECCCCCCCCCC
>Mature Secondary Structure 
GRKLLGLLMLAVLLAGCAGVPSSSAPQAIGTVERPAPSNLPKPTPGMDPDVLLREFLKA
CHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
TADPANRHLAARQFLTQSASNAWDDAGSALLIDHVVFVETRAAERVSATMRADILGSLSD
CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHH
MGVFETAEGVLPDPGPIELVKTSGGWRIDRLPNGVFLDWQQFQATYKRNTLYFADPTGKT
CCCHHCCCCCCCCCCCEEEEECCCCEEEECCCCCEEECHHHHHHHHHCCEEEEECCCCCE
VVPDPRYVAVPDHDQLATELVSKLIAGPRPEMAHTVRNLLAPPLRLRGPVTRADGGKSGI
ECCCCCEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHCCCCCCCCCCCCCC
GRGYGGARIDLEKLSTTDPHSRQLVAAQIIWTLARADIRGPYVINADGAPLDDRFRDGWT
CCCCCCCEEEHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHCCCCC
TSDVAATDPGVADGAGAGLHALVNGSLVSLDGQHTVVVPGAFGRMGDQTGAALSRNGRQV
CCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCEEEEECCCCCCCCCCCCHHHHCCCHHE
ASVVTLHRGAPDMAASLWIGDLGAEAVQSADGHSLSRPTWSLDDVVWVVVDGNNVLRAIQ
EHHHHHHCCCCCHHHHHEEHHCCHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH
EPASGQPARLPVDSVAVATRFPGPITDLQLSRDSTRAAMVIGGQVILASVEQTQAGQYAL
CCCCCCCCCCCHHHHHEEECCCCCCCCEEECCCCCCEEEEECCEEEEEEHHHCCCCCEEE
TYPRRLGFGLGNSVVSLSWRTGDDIVVTRTDSSHPVSYVNLDGVNSDAPPHGVQMPVTTV
ECHHHHCCCCCCCEEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEE
VANPSTAYVAGPQGVLQYSPSADGQQGWSEVPGLTVPGAAPVLPG
EECCCEEEEECCCCEEEECCCCCCCCCHHHCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA