| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is tgs3 [H]
Identifier: 41409445
GI number: 41409445
Start: 3715674
End: 3717095
Strand: Reverse
Name: tgs3 [H]
Synonym: MAP3347c
Alternate gene names: 41409445
Gene position: 3717095-3715674 (Counterclockwise)
Preceding gene: 41409447
Following gene: 41409444
Centisome position: 76.96
GC content: 69.83
Gene sequence:
>1422_bases ATGGTTAGCCGGTTGTCCCCGGCGGATGCGTCGTTCTACCGGCTGGAGAACACCGCCACCCCCATGTACGTCGGATCGCT GGCGATCCTGCGCCGCCCGCGTGCCGGGCTGAGCTACGAGACGCTGCTGCACACCATCGAGCAGCGGCTGCCGCAGATAC CGCGCTACCGGCAGAAGGTGCGGGAGGTGCCGGTCGGCACCGCCCGGCCGGTGTGGATCGACGACGGCGACTTCGACATC ACCTATCACGTGCGCCGCTCGGCGCTGCCGTCGCCGGGCAGTGACGAGCAGCTGCACGAGCTGATCGCCCGGCTGGCCGC CCGGCCGCTGGACAAGACGCGGCCGCTGTGGGAGATGTATCTGGTCGAGGGCCTGTCCAAGAACCGGCTGGCGCTCTACA CCAAGTCCCATCAAGCGCTGATCAACGGGATGACGGCGCTGGAGATCAACCACGTCATCGCCGATCGGACCAAACGCCCG CCGGCCTTCCCCGAAGACATCTGGGTCCCGGAACGCGACCCGGGCAACACCCGGCTGGTCCTCGGCGCGATCGGGGAGTG GCTGGTGGGCCCCAGCGCGCAGCTGCAGGCCGTCGGGTCGGCGATCGGCGGGCTGGTGACCAACTACGGCGAGCTGGTCG ACGCCGGCCGGCGGGTCTTCGATTTCGTGCGCAACGTGGCCCGCGGCACCGCGCCCAGCAGCCCGCTCAACGCCACCGTG TCGCGCCACCGGCGGTTCACCGTGGCCAGCGGCAGCCTGGAGGACTACCGCACCGTGCGGGCCCGCTACGACTGCGACGT CAACGACGTGGTGCTGGCGGTGATCGCCGGCGCCCTGGGCAGCTGGCTGATGTCCCGCGGGGTGGCGGTGTCGCCCACCG CGACGGTGCGGGCGATGGCGCCGCTGTCGGTGTACGCCGACGGCGACCTGGACGTCAGCGGCCCCGGTCAGGCGATCAGC CAGGTGATGCCGTTTCTGGTCGACCTACCGGTGGGGGAGCCGAACGCGGTGGTGCGGCTCTCCCAGATCGCGCACGCCAC CGAATCCAACCCGACGGCCGCGCATCTGGTGGACGCCAGGACCATCGTCACGCTGTCGGGTTTCGCCCCGCCCACCCTGC ACGCCATGGGCATCCGGGTCGCGACCAGCTTCCCGAGCTTCTCCAAGCGCACCTTCAACCTGTTGATCACCAACGCGCCC GGGGCGCAGTCGCAGATGTACGTCGCCGGCACCAAGCTGCTGGAGACCTACTCGGTGCCGCCGCTGCTGCACAACCAGGC GCTGGCCATCGGCGTGACGTCCTACAACGGCATGCTCTACTACGGCATCAACGCCGACCGCGAAGCGATGAGCGACGTCG ACCTGCTGCCCGCATTGCTGAACCAGGCGCTCGAGGAACTGGTGGAGGCCGCCCGGTCTTAG
Upstream 100 bases:
>100_bases GTACCCGCGCTGACGGGCGCGCCGGCCGGACCACTACGGTGGGCGAGAAATACGGTCGCTGCGCGCACGGACGACCCACT GACCAGGAGGACAGCGCTGC
Downstream 100 bases:
>100_bases GCAGCGCTAGACAGCGCTGAAAATCCCTGCGTGGGGCTATCATTCGTGGCTGTGAGCAGCGCGAAAAATGACGGCGTTCC CCTCAAGGCCGGCAAGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: TGS3; Probable triacylglycerol synthase tgs3 [H]
Number of amino acids: Translated: 473; Mature: 473
Protein sequence:
>473_residues MVSRLSPADASFYRLENTATPMYVGSLAILRRPRAGLSYETLLHTIEQRLPQIPRYRQKVREVPVGTARPVWIDDGDFDI TYHVRRSALPSPGSDEQLHELIARLAARPLDKTRPLWEMYLVEGLSKNRLALYTKSHQALINGMTALEINHVIADRTKRP PAFPEDIWVPERDPGNTRLVLGAIGEWLVGPSAQLQAVGSAIGGLVTNYGELVDAGRRVFDFVRNVARGTAPSSPLNATV SRHRRFTVASGSLEDYRTVRARYDCDVNDVVLAVIAGALGSWLMSRGVAVSPTATVRAMAPLSVYADGDLDVSGPGQAIS QVMPFLVDLPVGEPNAVVRLSQIAHATESNPTAAHLVDARTIVTLSGFAPPTLHAMGIRVATSFPSFSKRTFNLLITNAP GAQSQMYVAGTKLLETYSVPPLLHNQALAIGVTSYNGMLYYGINADREAMSDVDLLPALLNQALEELVEAARS
Sequences:
>Translated_473_residues MVSRLSPADASFYRLENTATPMYVGSLAILRRPRAGLSYETLLHTIEQRLPQIPRYRQKVREVPVGTARPVWIDDGDFDI TYHVRRSALPSPGSDEQLHELIARLAARPLDKTRPLWEMYLVEGLSKNRLALYTKSHQALINGMTALEINHVIADRTKRP PAFPEDIWVPERDPGNTRLVLGAIGEWLVGPSAQLQAVGSAIGGLVTNYGELVDAGRRVFDFVRNVARGTAPSSPLNATV SRHRRFTVASGSLEDYRTVRARYDCDVNDVVLAVIAGALGSWLMSRGVAVSPTATVRAMAPLSVYADGDLDVSGPGQAIS QVMPFLVDLPVGEPNAVVRLSQIAHATESNPTAAHLVDARTIVTLSGFAPPTLHAMGIRVATSFPSFSKRTFNLLITNAP GAQSQMYVAGTKLLETYSVPPLLHNQALAIGVTSYNGMLYYGINADREAMSDVDLLPALLNQALEELVEAARS >Mature_473_residues MVSRLSPADASFYRLENTATPMYVGSLAILRRPRAGLSYETLLHTIEQRLPQIPRYRQKVREVPVGTARPVWIDDGDFDI TYHVRRSALPSPGSDEQLHELIARLAARPLDKTRPLWEMYLVEGLSKNRLALYTKSHQALINGMTALEINHVIADRTKRP PAFPEDIWVPERDPGNTRLVLGAIGEWLVGPSAQLQAVGSAIGGLVTNYGELVDAGRRVFDFVRNVARGTAPSSPLNATV SRHRRFTVASGSLEDYRTVRARYDCDVNDVVLAVIAGALGSWLMSRGVAVSPTATVRAMAPLSVYADGDLDVSGPGQAIS QVMPFLVDLPVGEPNAVVRLSQIAHATESNPTAAHLVDARTIVTLSGFAPPTLHAMGIRVATSFPSFSKRTFNLLITNAP GAQSQMYVAGTKLLETYSVPPLLHNQALAIGVTSYNGMLYYGINADREAMSDVDLLPALLNQALEELVEAARS
Specific function: Upon expression in E.coli functions as a triacylglycerol synthase, making triacylglycerol (TG) from diolein and long-chain fatty acyl-CoA. Has no wax synthase activity to produce wax esters [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the long-chain O-acyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004255 [H]
Pfam domain/function: PF03007 UPF0089 [H]
EC number: =2.3.1.20 [H]
Molecular weight: Translated: 51421; Mature: 51421
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSRLSPADASFYRLENTATPMYVGSLAILRRPRAGLSYETLLHTIEQRLPQIPRYRQKV CCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHH REVPVGTARPVWIDDGDFDITYHVRRSALPSPGSDEQLHELIARLAARPLDKTRPLWEMY HHCCCCCCCEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH LVEGLSKNRLALYTKSHQALINGMTALEINHVIADRTKRPPAFPEDIWVPERDPGNTRLV HHHCCCCCEEEEEECCHHHHHCCCHHEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEE LGAIGEWLVGPSAQLQAVGSAIGGLVTNYGELVDAGRRVFDFVRNVARGTAPSSPLNATV EEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH SRHRRFTVASGSLEDYRTVRARYDCDVNDVVLAVIAGALGSWLMSRGVAVSPTATVRAMA HHCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCHHEEEEC PLSVYADGDLDVSGPGQAISQVMPFLVDLPVGEPNAVVRLSQIAHATESNPTAAHLVDAR CEEEEECCCCCCCCCHHHHHHHHHHHEECCCCCCHHHEEHHHHHHHCCCCCCHHHEECCE TIVTLSGFAPPTLHAMGIRVATSFPSFSKRTFNLLITNAPGAQSQMYVAGTKLLETYSVP EEEEECCCCCCCHHHHCEEEEECCCCCCCEEEEEEEECCCCCCCEEEEHHHHHHHHCCCC PLLHNQALAIGVTSYNGMLYYGINADREAMSDVDLLPALLNQALEELVEAARS CCCCCCEEEEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVSRLSPADASFYRLENTATPMYVGSLAILRRPRAGLSYETLLHTIEQRLPQIPRYRQKV CCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHH REVPVGTARPVWIDDGDFDITYHVRRSALPSPGSDEQLHELIARLAARPLDKTRPLWEMY HHCCCCCCCEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH LVEGLSKNRLALYTKSHQALINGMTALEINHVIADRTKRPPAFPEDIWVPERDPGNTRLV HHHCCCCCEEEEEECCHHHHHCCCHHEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEE LGAIGEWLVGPSAQLQAVGSAIGGLVTNYGELVDAGRRVFDFVRNVARGTAPSSPLNATV EEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH SRHRRFTVASGSLEDYRTVRARYDCDVNDVVLAVIAGALGSWLMSRGVAVSPTATVRAMA HHCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCHHEEEEC PLSVYADGDLDVSGPGQAISQVMPFLVDLPVGEPNAVVRLSQIAHATESNPTAAHLVDAR CEEEEECCCCCCCCCHHHHHHHHHHHEECCCCCCHHHEEHHHHHHHCCCCCCHHHEECCE TIVTLSGFAPPTLHAMGIRVATSFPSFSKRTFNLLITNAPGAQSQMYVAGTKLLETYSVP EEEEECCCCCCCHHHHCEEEEECCCCCCCEEEEEEEECCCCCCCEEEEHHHHHHHHCCCC PLLHNQALAIGVTSYNGMLYYGINADREAMSDVDLLPALLNQALEELVEAARS CCCCCCEEEEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]