Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409405

Identifier: 41409405

GI number: 41409405

Start: 3678281

End: 3679381

Strand: Reverse

Name: 41409405

Synonym: MAP3307c

Alternate gene names: NA

Gene position: 3679381-3678281 (Counterclockwise)

Preceding gene: 41409407

Following gene: 41409404

Centisome position: 76.18

GC content: 69.85

Gene sequence:

>1101_bases
GTGTCCGGCGGCCGATTCGGGCGCGCCACCGACGGCGCGGCCGGGCGGCTGTGTAATCCTGGGAAAATGACGTCGCAGCG
GCCCCCGCGCAGCACGGGTCGTGTGCCGGTGCTGCGCGACGAGTGGCGCGAACCGTTGCGCGCGCTTCGCGACCCGCTGG
CCCGGGAAGCCGGGCGGACCCGCGCAGACCGGGAACGGCCGCGGCAGTGGCGCAAACAGACCTGGCTGGGGCGGTTCGTC
TCCACCTACGGCTGGCGCGCATACGCCCTGCCCGCGCTGGTGGTGCTCACCGCCGTCGTCATCTACCAGACCGTGACCGG
CACCAGCTCGCCGAAACCGACGGCCAGCCAGCCGATCCAGAGCCCGACCGCGATCGGCGCGGTGGGCACCACGATCATCG
ACGCCCCGCCGCGCGGGCTCGCCGCGTTCGACGCCAACCTGCCGGCCGGCACATTGCCCGACGGCGGCCCGTTCACCGAA
GCCGGCGACAAGACCTGGCACGTGGTGCCCGGCGTCACACCGCAGATCGGTCAGGGCACCGCCAAGGTGTTCAAGTACAG
CGTCGAGGTGGAGAACGGCATCGACCCGACCATGTTCGGCGGCGACGACGCGTTCGCTCAGATGGTCGACCAGACGCTGG
CCAACCCGAAGGGCTGGACGCACAACCCGCAGTTCGCGTTCATCCGGGTCGACGCGACCGCCGGCGCCAAGCCGGACTTT
CGCATTTCGCTGGTGTCGCCGGTGACGGTCCGCGAGGGCTGCGGCTACGAATTCCGGCTCGAAACCTCTTGTTACAACCC
GGTATTCGGGGCCAACCGGGAGGCGCGGGTCTTCATCAACGAGGCGCGTTGCGTGCGCGGCGCGGTGCCGTTCGAAGGGG
ACGTCGGCTCCTACCGCCAATACGTGATCAACCACGAGGTCGGCCACGCCATCGGCTACCTGCACCACGAGCCGTGCGAA
CAGCAGGGCGCGCTGGCGCCGGTGATGATGCAGCAGACGTTCTCCACGTCCAACAACGACGCCGCCCAGTTCGACCCCGA
CGTCGTCAAGGCCGACGGCAAGACCTGCCGCTTCAATCCCTGGCCGTACCCGATCGCCTAG

Upstream 100 bases:

>100_bases
TCGGTAAACCGGGGCCAGCCGCTCGCAGCTCGTTGCACAGACCTTACTACCCGCGGGGTTGATGCGACCGTGATCGACGT
CGTCGTCGCTGGCAGAAGCG

Downstream 100 bases:

>100_bases
CGGCCTCGTTGCCGCGCCGTGGGCGGGCTGCTGTGATGGTGGTAGACGGCTCGAATCGCTGAGCCGACCGACCTGCAGGA
GACGTTTCCCGTGTCCACGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MSGGRFGRATDGAAGRLCNPGKMTSQRPPRSTGRVPVLRDEWREPLRALRDPLAREAGRTRADRERPRQWRKQTWLGRFV
STYGWRAYALPALVVLTAVVIYQTVTGTSSPKPTASQPIQSPTAIGAVGTTIIDAPPRGLAAFDANLPAGTLPDGGPFTE
AGDKTWHVVPGVTPQIGQGTAKVFKYSVEVENGIDPTMFGGDDAFAQMVDQTLANPKGWTHNPQFAFIRVDATAGAKPDF
RISLVSPVTVREGCGYEFRLETSCYNPVFGANREARVFINEARCVRGAVPFEGDVGSYRQYVINHEVGHAIGYLHHEPCE
QQGALAPVMMQQTFSTSNNDAAQFDPDVVKADGKTCRFNPWPYPIA

Sequences:

>Translated_366_residues
MSGGRFGRATDGAAGRLCNPGKMTSQRPPRSTGRVPVLRDEWREPLRALRDPLAREAGRTRADRERPRQWRKQTWLGRFV
STYGWRAYALPALVVLTAVVIYQTVTGTSSPKPTASQPIQSPTAIGAVGTTIIDAPPRGLAAFDANLPAGTLPDGGPFTE
AGDKTWHVVPGVTPQIGQGTAKVFKYSVEVENGIDPTMFGGDDAFAQMVDQTLANPKGWTHNPQFAFIRVDATAGAKPDF
RISLVSPVTVREGCGYEFRLETSCYNPVFGANREARVFINEARCVRGAVPFEGDVGSYRQYVINHEVGHAIGYLHHEPCE
QQGALAPVMMQQTFSTSNNDAAQFDPDVVKADGKTCRFNPWPYPIA
>Mature_365_residues
SGGRFGRATDGAAGRLCNPGKMTSQRPPRSTGRVPVLRDEWREPLRALRDPLAREAGRTRADRERPRQWRKQTWLGRFVS
TYGWRAYALPALVVLTAVVIYQTVTGTSSPKPTASQPIQSPTAIGAVGTTIIDAPPRGLAAFDANLPAGTLPDGGPFTEA
GDKTWHVVPGVTPQIGQGTAKVFKYSVEVENGIDPTMFGGDDAFAQMVDQTLANPKGWTHNPQFAFIRVDATAGAKPDFR
ISLVSPVTVREGCGYEFRLETSCYNPVFGANREARVFINEARCVRGAVPFEGDVGSYRQYVINHEVGHAIGYLHHEPCEQ
QGALAPVMMQQTFSTSNNDAAQFDPDVVKADGKTCRFNPWPYPIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39891; Mature: 39760

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGGRFGRATDGAAGRLCNPGKMTSQRPPRSTGRVPVLRDEWREPLRALRDPLAREAGRT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
RADRERPRQWRKQTWLGRFVSTYGWRAYALPALVVLTAVVIYQTVTGTSSPKPTASQPIQ
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SPTAIGAVGTTIIDAPPRGLAAFDANLPAGTLPDGGPFTEAGDKTWHVVPGVTPQIGQGT
CCCHHHHHCCEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
AKVFKYSVEVENGIDPTMFGGDDAFAQMVDQTLANPKGWTHNPQFAFIRVDATAGAKPDF
EEEEEEEEEECCCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCE
RISLVSPVTVREGCGYEFRLETSCYNPVFGANREARVFINEARCVRGAVPFEGDVGSYRQ
EEEEECCEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEECCHHHHCCCCCCCCCHHHHH
YVINHEVGHAIGYLHHEPCEQQGALAPVMMQQTFSTSNNDAAQFDPDVVKADGKTCRFNP
HHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCEEECCC
WPYPIA
CCCCCC
>Mature Secondary Structure 
SGGRFGRATDGAAGRLCNPGKMTSQRPPRSTGRVPVLRDEWREPLRALRDPLAREAGRT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
RADRERPRQWRKQTWLGRFVSTYGWRAYALPALVVLTAVVIYQTVTGTSSPKPTASQPIQ
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SPTAIGAVGTTIIDAPPRGLAAFDANLPAGTLPDGGPFTEAGDKTWHVVPGVTPQIGQGT
CCCHHHHHCCEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
AKVFKYSVEVENGIDPTMFGGDDAFAQMVDQTLANPKGWTHNPQFAFIRVDATAGAKPDF
EEEEEEEEEECCCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCE
RISLVSPVTVREGCGYEFRLETSCYNPVFGANREARVFINEARCVRGAVPFEGDVGSYRQ
EEEEECCEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEECCHHHHCCCCCCCCCHHHHH
YVINHEVGHAIGYLHHEPCEQQGALAPVMMQQTFSTSNNDAAQFDPDVVKADGKTCRFNP
HHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCEEECCC
WPYPIA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA