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The map label for this gene is nudC [H]

Identifier: 41409397

GI number: 41409397

Start: 3666132

End: 3668132

Strand: Reverse

Name: nudC [H]

Synonym: MAP3299c

Alternate gene names: 41409397

Gene position: 3668132-3666132 (Counterclockwise)

Preceding gene: 41409398

Following gene: 41409395

Centisome position: 75.95

GC content: 71.16

Gene sequence:

>2001_bases
GTGCGCAACGGTAGGTCGCGAAAGCTGAGCGGTCTGAATCAGACGCTGGCCGCCCAGCGCGGCCACCAGTTGGTCGGCGT
GGTGCGCATTCCCGAGGAGCACGCCAGCCCCATCCGCGTCATCACCCGGCGCCTGGCCATCGCGCTGGTGGTGCTGTTCG
CCGCCGCCGTCATCGTCTACGCCGACCGGTCCGGCTACCGGGATCTTAGGGGCGGGTCGCTGACCTTTCTGGACTGCGTG
TATTTCTCCGCGGTGTCCCTGTCGACCACCGGCTACGGCGACATCACGCCCTACACCGAGACCGCCCGCCTGGTGCACAC
CCTGATCTTCACCGCGCTGCGGATCGCCTTTTTGGCCGTGTTGGTCGGCACCACGCTGGAAGTGCTCTCCGAGCGGTCCC
GCCAAGGGTGGAAGATTCAGCGTTGGAGGAGCAGAGTGCGCAACCACACCATCGTGATCGGCTACGGCACCAAGGGCAAA
ACCGCCGTCGCCGCCATCCTGGGCGACGAGACCACCCAGGCCGAGGTCGTCGTCGTCGACACCGATCGCAGCACCCTCGA
GCACGCCGAGAGCGCGGACCTGGTCACCGTGCACGGCGACGCCACCAAGGCCGACGTGCTGCGGCTGGCCGGGGCCCAGC
ACGCGGCGTCCATCATCGTGGCCACCAGCCGCGACGACACCGCCGTGCTGGTGACGCTGACCGCGCGCGAGATCGCTCCG
CACGCCAAGATCGTCGCCTCGATCCGGGAGGCCGAGAATCAGCACCTGCTGCAGCAGTCGGGCGCGGACTCGGTGGTGGT
GTCGTCGGCGACGGCGGGCCGGCTGCTCGGCCTGGCCACCACCACCCCGAGCGTGGTGGAGATGATCGAGGACCTGCTGA
CGCCCGACGTCGGGTTGGCGATCGCCGAGCGGGAGGTCGAGCAGTCCGAGATCGGCGGCTCGCCCCGGCACCTGCGCGAC
ATCGTGCTCGGCGTGGTGCGACGGCCGGCTGCTGCGCATCGACGCCCCCGAGGTGGACGCGGTCGAGGCCAACGACCGGT
TGCTCTACATCCGCAGCGCGGGGCATTGATGGCGATCGCGGACTTTCAGCTGCGCAGCGTTCCGCTGCTGTCGCGGGTGG
GCGCCGATCGGGCCGACCAGTTGCGCACCGATGTCGAGGCCGCCGCGGCGGGCTGGGCCGACGCGGCGCTGCTGCGGGTG
GACTCGCGCAACCAGGTGCTCGTCGCCGACGGCCGGGTGGTGCTGGGCGCCGCCGCCGAGCTGGGTGACAAGCCCCCGCC
GGAGGCGGTGTTTTTGGGGCGCCTCGAGGACGGCCGGCACGTGTGGGCCATCCGCGGCGCGCTGCAGGCACCGGATGATC
CCGAGGTGCGCGCCGAGGTGGTGAACCTGCGCAGCCTCGGCCCGATCTTCGACGACACCAGCAGCCAGCTGATGTCCTCG
GCCGTCGCGCTGCTGAACTGGCACGAGCGGTCGCGGTTCAGCTCGGTGGACGGCTCGCCGACCAGGCCGGCCCGGGCGGG
CTGGTCGCGGGTCAACCCGGTCACCGGGCACGAGGAGTTCCCGCGCATCGACCCGGCGGTGATCTGCCTGGTGCACGACG
GCGGCGACCGCGCGGTGCTGGCCCGTCAGGCGGTGTGGCCGGAGCGGATGTTCTCGCTGCTGGCCGGATTCGTCGAGGCC
GGGGAGTCGTTCGAGGTGTGTGTCGCCCGCGAGGTCCGCGAGGAGATCGGGCTGACCGTGCGCGACGTGCGCTACCTGGG
CAGCCAGCCGTGGCCGTTCCCGCGCTCGCTGATGGTCGGCTTCCACGCCGTCGCCGACCCGGCGCAGGACTTCGCGTTCA
ACGACGGCGAGATCGCCGAGGCGGCGTGGTTCACCCGCGACGAGGTGCGCGCCGCGCTGGCGGCCGGGGATTGGTCGTCC
GACTCGGAGTCGAAACTCCTACTGCCCGGGTCGATTTCGATCGCGCGGGTGATCATCGAATCCTGGGCCGCGCTCGACTG
A

Upstream 100 bases:

>100_bases
GCCGGTGTGACCCGCGCCGCCCGAGTATTGGGCGACCGGTTCCCGTGGTTACATAAGACCCGTGTCCCGAGCGCAGCAGT
CAAGGCGATGACGGACCGCC

Downstream 100 bases:

>100_bases
CCCGGTGGTCAGTTGCCGGCTTCGGCCAGCTTGGCCTTCACCTGCGCGGCGCTGGGGTTGGTCAGTGTGGAACCGTCGGC
GAACTTCACCGTCGGAACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 666; Mature: 666

Protein sequence:

>666_residues
MRNGRSRKLSGLNQTLAAQRGHQLVGVVRIPEEHASPIRVITRRLAIALVVLFAAAVIVYADRSGYRDLRGGSLTFLDCV
YFSAVSLSTTGYGDITPYTETARLVHTLIFTALRIAFLAVLVGTTLEVLSERSRQGWKIQRWRSRVRNHTIVIGYGTKGK
TAVAAILGDETTQAEVVVVDTDRSTLEHAESADLVTVHGDATKADVLRLAGAQHAASIIVATSRDDTAVLVTLTAREIAP
HAKIVASIREAENQHLLQQSGADSVVVSSATAGRLLGLATTTPSVVEMIEDLLTPDVGLAIAEREVEQSEIGGSPRHLRD
IVLGVVRRPAAAHRRPRGGRGRGQRPVALHPQRGALMAIADFQLRSVPLLSRVGADRADQLRTDVEAAAAGWADAALLRV
DSRNQVLVADGRVVLGAAAELGDKPPPEAVFLGRLEDGRHVWAIRGALQAPDDPEVRAEVVNLRSLGPIFDDTSSQLMSS
AVALLNWHERSRFSSVDGSPTRPARAGWSRVNPVTGHEEFPRIDPAVICLVHDGGDRAVLARQAVWPERMFSLLAGFVEA
GESFEVCVAREVREEIGLTVRDVRYLGSQPWPFPRSLMVGFHAVADPAQDFAFNDGEIAEAAWFTRDEVRAALAAGDWSS
DSESKLLLPGSISIARVIIESWAALD

Sequences:

>Translated_666_residues
MRNGRSRKLSGLNQTLAAQRGHQLVGVVRIPEEHASPIRVITRRLAIALVVLFAAAVIVYADRSGYRDLRGGSLTFLDCV
YFSAVSLSTTGYGDITPYTETARLVHTLIFTALRIAFLAVLVGTTLEVLSERSRQGWKIQRWRSRVRNHTIVIGYGTKGK
TAVAAILGDETTQAEVVVVDTDRSTLEHAESADLVTVHGDATKADVLRLAGAQHAASIIVATSRDDTAVLVTLTAREIAP
HAKIVASIREAENQHLLQQSGADSVVVSSATAGRLLGLATTTPSVVEMIEDLLTPDVGLAIAEREVEQSEIGGSPRHLRD
IVLGVVRRPAAAHRRPRGGRGRGQRPVALHPQRGALMAIADFQLRSVPLLSRVGADRADQLRTDVEAAAAGWADAALLRV
DSRNQVLVADGRVVLGAAAELGDKPPPEAVFLGRLEDGRHVWAIRGALQAPDDPEVRAEVVNLRSLGPIFDDTSSQLMSS
AVALLNWHERSRFSSVDGSPTRPARAGWSRVNPVTGHEEFPRIDPAVICLVHDGGDRAVLARQAVWPERMFSLLAGFVEA
GESFEVCVAREVREEIGLTVRDVRYLGSQPWPFPRSLMVGFHAVADPAQDFAFNDGEIAEAAWFTRDEVRAALAAGDWSS
DSESKLLLPGSISIARVIIESWAALD
>Mature_666_residues
MRNGRSRKLSGLNQTLAAQRGHQLVGVVRIPEEHASPIRVITRRLAIALVVLFAAAVIVYADRSGYRDLRGGSLTFLDCV
YFSAVSLSTTGYGDITPYTETARLVHTLIFTALRIAFLAVLVGTTLEVLSERSRQGWKIQRWRSRVRNHTIVIGYGTKGK
TAVAAILGDETTQAEVVVVDTDRSTLEHAESADLVTVHGDATKADVLRLAGAQHAASIIVATSRDDTAVLVTLTAREIAP
HAKIVASIREAENQHLLQQSGADSVVVSSATAGRLLGLATTTPSVVEMIEDLLTPDVGLAIAEREVEQSEIGGSPRHLRD
IVLGVVRRPAAAHRRPRGGRGRGQRPVALHPQRGALMAIADFQLRSVPLLSRVGADRADQLRTDVEAAAAGWADAALLRV
DSRNQVLVADGRVVLGAAAELGDKPPPEAVFLGRLEDGRHVWAIRGALQAPDDPEVRAEVVNLRSLGPIFDDTSSQLMSS
AVALLNWHERSRFSSVDGSPTRPARAGWSRVNPVTGHEEFPRIDPAVICLVHDGGDRAVLARQAVWPERMFSLLAGFVEA
GESFEVCVAREVREEIGLTVRDVRYLGSQPWPFPRSLMVGFHAVADPAQDFAFNDGEIAEAAWFTRDEVRAALAAGDWSS
DSESKLLLPGSISIARVIIESWAALD

Specific function: Unknown

COG id: COG2816

COG function: function code L; NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI50593112, Length=227, Percent_Identity=37.8854625550661, Blast_Score=148, Evalue=2e-35,
Organism=Homo sapiens, GI13899267, Length=199, Percent_Identity=35.1758793969849, Blast_Score=126, Evalue=8e-29,
Organism=Escherichia coli, GI48994995, Length=190, Percent_Identity=32.1052631578947, Blast_Score=99, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI71986510, Length=117, Percent_Identity=39.3162393162393, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI212645999, Length=117, Percent_Identity=39.3162393162393, Blast_Score=78, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6321371, Length=223, Percent_Identity=30.9417040358744, Blast_Score=93, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 71906; Mature: 71906

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNGRSRKLSGLNQTLAAQRGHQLVGVVRIPEEHASPIRVITRRLAIALVVLFAAAVIVY
CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHEE
ADRSGYRDLRGGSLTFLDCVYFSAVSLSTTGYGDITPYTETARLVHTLIFTALRIAFLAV
ECCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LVGTTLEVLSERSRQGWKIQRWRSRVRNHTIVIGYGTKGKTAVAAILGDETTQAEVVVVD
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCEEEEEEE
TDRSTLEHAESADLVTVHGDATKADVLRLAGAQHAASIIVATSRDDTAVLVTLTAREIAP
CCCHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEHHHHCC
HAKIVASIREAENQHLLQQSGADSVVVSSATAGRLLGLATTTPSVVEMIEDLLTPDVGLA
HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCCHHHHHHHHHHHCCCCCHH
IAEREVEQSEIGGSPRHLRDIVLGVVRRPAAAHRRPRGGRGRGQRPVALHPQRGALMAIA
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEECCCCCCEEEEE
DFQLRSVPLLSRVGADRADQLRTDVEAAAAGWADAALLRVDSRNQVLVADGRVVLGAAAE
CCHHHCCHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCEEEEEHHH
LGDKPPPEAVFLGRLEDGRHVWAIRGALQAPDDPEVRAEVVNLRSLGPIFDDTSSQLMSS
CCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
AVALLNWHERSRFSSVDGSPTRPARAGWSRVNPVTGHEEFPRIDPAVICLVHDGGDRAVL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEH
ARQAVWPERMFSLLAGFVEAGESFEVCVAREVREEIGLTVRDVRYLGSQPWPFPRSLMVG
HHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEHHHHHCCCCCCCCHHHHHH
FHAVADPAQDFAFNDGEIAEAAWFTRDEVRAALAAGDWSSDSESKLLLPGSISIARVIIE
HHHHCCCHHHCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHH
SWAALD
HHHCCC
>Mature Secondary Structure
MRNGRSRKLSGLNQTLAAQRGHQLVGVVRIPEEHASPIRVITRRLAIALVVLFAAAVIVY
CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHEE
ADRSGYRDLRGGSLTFLDCVYFSAVSLSTTGYGDITPYTETARLVHTLIFTALRIAFLAV
ECCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LVGTTLEVLSERSRQGWKIQRWRSRVRNHTIVIGYGTKGKTAVAAILGDETTQAEVVVVD
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCEEEEEEE
TDRSTLEHAESADLVTVHGDATKADVLRLAGAQHAASIIVATSRDDTAVLVTLTAREIAP
CCCHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEHHHHCC
HAKIVASIREAENQHLLQQSGADSVVVSSATAGRLLGLATTTPSVVEMIEDLLTPDVGLA
HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCCHHHHHHHHHHHCCCCCHH
IAEREVEQSEIGGSPRHLRDIVLGVVRRPAAAHRRPRGGRGRGQRPVALHPQRGALMAIA
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEECCCCCCEEEEE
DFQLRSVPLLSRVGADRADQLRTDVEAAAAGWADAALLRVDSRNQVLVADGRVVLGAAAE
CCHHHCCHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCEEEEEHHH
LGDKPPPEAVFLGRLEDGRHVWAIRGALQAPDDPEVRAEVVNLRSLGPIFDDTSSQLMSS
CCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
AVALLNWHERSRFSSVDGSPTRPARAGWSRVNPVTGHEEFPRIDPAVICLVHDGGDRAVL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEH
ARQAVWPERMFSLLAGFVEAGESFEVCVAREVREEIGLTVRDVRYLGSQPWPFPRSLMVG
HHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEHHHHHCCCCCCCCHHHHHH
FHAVADPAQDFAFNDGEIAEAAWFTRDEVRAALAAGDWSSDSESKLLLPGSISIARVIIE
HHHHCCCHHHCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHH
SWAALD
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]