| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409362
Identifier: 41409362
GI number: 41409362
Start: 3625071
End: 3625808
Strand: Reverse
Name: 41409362
Synonym: MAP3264c
Alternate gene names: NA
Gene position: 3625808-3625071 (Counterclockwise)
Preceding gene: 41409364
Following gene: 41409361
Centisome position: 75.07
GC content: 67.75
Gene sequence:
>738_bases TTGCCGCCAGACGGCTCCGGGGGTGATGTGATGCGCGAGGCCAGCACCACGATCGTCACTCAGCTGGTGGAGCTGGTGAC CAGTTTGGAGCGGGAGAACAGCGACACCGCGGCCGGGCTGTACGAACTCATCGACAACGGCGTCCACCACGTCACCGGCT CCCAGTACGCGGGGATCACCCTGGCCGAGAAGAGCAAATCGGTCAACAGCGTGGCGGCCACGCATCGCTACCCGATGGTG CTGGACGCCATCCAGAACAAGTACGGCGAGGGGCCGTGCCTGGCCGCGGCCTGGGAACACCACGTCATGCACATCGCCGA CCTGGCCGCCGAACAGCGCTGGCAGCGCTACCGGCGGCACGCGCTCGAGCAGACCCCGATCCGCTCCATCCTGTCGTTCG AGCTGTTCGTCGACCGCACCAGCATGGCCGCCCTCAACTTCTATGCCGACCCGCCGCACGCGTTCACCGAGGAGTCGGTC GAGCTCGGCACCGTCTACGCCACCCACATCGCCCTGGCCTGGTCGATGATGCGCCGCCAGGACCAGTTCCGCAGCGCCCT GGCCTCCCGCGACATCATCGGGCAGGCCAAGGGCGTGATCATGGAGCGCTTCGACCTCGACGCGGTGGAAGCCTTCGAGC TGCTCACCCGGCTCTCGCAGCAGTCCAACACCCGGGTGGTCGACATCGCGGCCGCACTCATCGACAGCGAGCACCCGCTC AAGCAGCGCCGGCGCTAG
Upstream 100 bases:
>100_bases TCCGGCCTTGCGCTTCGTTGTCTGGCTCATAGACTTCTGGGGTGGGTGTTGGCAGCCACGAAAATGTCAATGCCTCCCGT GATGCCGGCAGGGAAGGGCC
Downstream 100 bases:
>100_bases CCCATCGCCACCGGCGCCGGCCGGTGCTGTGCGATCAGCCGCTCGCCCAGCTCGTAGTCGTCGTCGGCGTTGTGGGTCAG CACCCCGACGACGGGCGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Response Regulator Receiver/ANTAR Domain-Containing Protein; Two-Component System Response Regulator; Response Regulator Receiver And ANTAR Domain Protein; GAF Sensor Protein; ANTAR Domain Protein; Two Component System Response Regulator; Transcriptional Regulator; Antar Domain-Containing Protein; ANTAR/GAF Domain-Containing Protein; Response Regulator; Transcription Antitermination Regulator; PAS/PAC Sensor Protein; Antar Domain Protein
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MPPDGSGGDVMREASTTIVTQLVELVTSLERENSDTAAGLYELIDNGVHHVTGSQYAGITLAEKSKSVNSVAATHRYPMV LDAIQNKYGEGPCLAAAWEHHVMHIADLAAEQRWQRYRRHALEQTPIRSILSFELFVDRTSMAALNFYADPPHAFTEESV ELGTVYATHIALAWSMMRRQDQFRSALASRDIIGQAKGVIMERFDLDAVEAFELLTRLSQQSNTRVVDIAAALIDSEHPL KQRRR
Sequences:
>Translated_245_residues MPPDGSGGDVMREASTTIVTQLVELVTSLERENSDTAAGLYELIDNGVHHVTGSQYAGITLAEKSKSVNSVAATHRYPMV LDAIQNKYGEGPCLAAAWEHHVMHIADLAAEQRWQRYRRHALEQTPIRSILSFELFVDRTSMAALNFYADPPHAFTEESV ELGTVYATHIALAWSMMRRQDQFRSALASRDIIGQAKGVIMERFDLDAVEAFELLTRLSQQSNTRVVDIAAALIDSEHPL KQRRR >Mature_244_residues PPDGSGGDVMREASTTIVTQLVELVTSLERENSDTAAGLYELIDNGVHHVTGSQYAGITLAEKSKSVNSVAATHRYPMVL DAIQNKYGEGPCLAAAWEHHVMHIADLAAEQRWQRYRRHALEQTPIRSILSFELFVDRTSMAALNFYADPPHAFTEESVE LGTVYATHIALAWSMMRRQDQFRSALASRDIIGQAKGVIMERFDLDAVEAFELLTRLSQQSNTRVVDIAAALIDSEHPLK QRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27363; Mature: 27232
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: PS50921 ANTAR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPDGSGGDVMREASTTIVTQLVELVTSLERENSDTAAGLYELIDNGVHHVTGSQYAGIT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEE LAEKSKSVNSVAATHRYPMVLDAIQNKYGEGPCLAAAWEHHVMHIADLAAEQRWQRYRRH EHHHHCCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALEQTPIRSILSFELFVDRTSMAALNFYADPPHAFTEESVELGTVYATHIALAWSMMRRQ HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH DQFRSALASRDIIGQAKGVIMERFDLDAVEAFELLTRLSQQSNTRVVDIAAALIDSEHPL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCH KQRRR HHCCC >Mature Secondary Structure PPDGSGGDVMREASTTIVTQLVELVTSLERENSDTAAGLYELIDNGVHHVTGSQYAGIT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEE LAEKSKSVNSVAATHRYPMVLDAIQNKYGEGPCLAAAWEHHVMHIADLAAEQRWQRYRRH EHHHHCCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALEQTPIRSILSFELFVDRTSMAALNFYADPPHAFTEESVELGTVYATHIALAWSMMRRQ HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH DQFRSALASRDIIGQAKGVIMERFDLDAVEAFELLTRLSQQSNTRVVDIAAALIDSEHPL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCH KQRRR HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA