| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409364
Identifier: 41409364
GI number: 41409364
Start: 3627428
End: 3628024
Strand: Reverse
Name: 41409364
Synonym: MAP3266c
Alternate gene names: NA
Gene position: 3628024-3627428 (Counterclockwise)
Preceding gene: 41409365
Following gene: 41409362
Centisome position: 75.12
GC content: 72.36
Gene sequence:
>597_bases TTGCGCCGGTCGAGTCCGGGTACCCGACGGGCTATGCCTTCCAAGCCTCGAGGTGAAGCGATGGGTGAGTTGGCCGACAC CGGCGCCCAGGTGGTCGACGGCGCGCGGCGCGAAGCGCAGGCCTACCGCGGCGACAATCCCCGCCCGCTGGGCGGCTACC TGGCGGTGCTGGTCGTCTACGGCCTGGTGGTGACGGCCGCGACGCTGGCCGCCCTGGCCAGTGGCCGCAGCCTGCCGACC CGATGGCGCGCCCAGGACCTGCTGATCCTCACCCTGGGCACCCACAAGCTGTCGCGCACCCTGACCAAGGACGCGGTGAC CAGCCCGCTGCGCGCGCCGTTCACCCACTACGCGGGCACCGGCGGCCCGGCCGAGGTGCAGGAGGAGGTCCGCGAGCAGA GCCAGCTGCGGCACAGCCTGGGCGAGCTGCTGACCTGCCCGTTCTGCCTGGACATGTGGGTTGCCACCGGGTTCGCCATC GGCCTGGTGTTCGCGCCGCGCTACACCCGGCTGGTCGCGGGCGTGTTCAGCGTGCTGACCGGTGCGGACTTTCTTCAGCT CGGCTACGCGATCGCGCAGCAGGCGGCGCAGGGCTGA
Upstream 100 bases:
>100_bases GGCGGCCAACACCGACCTGCGGTCGACCAACCGGGCGTTGCGGGAAGCCGCGAAGACCGCCGACGGCGACGCGGCCACCG GCTGAGCCGCCGTCCCCGGG
Downstream 100 bases:
>100_bases GCCGTCGCGCGCTCAGCCCGTCTTCGGCATCGGAATGCCCTCGCTGGCGGTGAATTGCGCGTCGTCCTCGGAGGACAGCC CGATGGATACGACGGAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MRRSSPGTRRAMPSKPRGEAMGELADTGAQVVDGARREAQAYRGDNPRPLGGYLAVLVVYGLVVTAATLAALASGRSLPT RWRAQDLLILTLGTHKLSRTLTKDAVTSPLRAPFTHYAGTGGPAEVQEEVREQSQLRHSLGELLTCPFCLDMWVATGFAI GLVFAPRYTRLVAGVFSVLTGADFLQLGYAIAQQAAQG
Sequences:
>Translated_198_residues MRRSSPGTRRAMPSKPRGEAMGELADTGAQVVDGARREAQAYRGDNPRPLGGYLAVLVVYGLVVTAATLAALASGRSLPT RWRAQDLLILTLGTHKLSRTLTKDAVTSPLRAPFTHYAGTGGPAEVQEEVREQSQLRHSLGELLTCPFCLDMWVATGFAI GLVFAPRYTRLVAGVFSVLTGADFLQLGYAIAQQAAQG >Mature_198_residues MRRSSPGTRRAMPSKPRGEAMGELADTGAQVVDGARREAQAYRGDNPRPLGGYLAVLVVYGLVVTAATLAALASGRSLPT RWRAQDLLILTLGTHKLSRTLTKDAVTSPLRAPFTHYAGTGGPAEVQEEVREQSQLRHSLGELLTCPFCLDMWVATGFAI GLVFAPRYTRLVAGVFSVLTGADFLQLGYAIAQQAAQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21155; Mature: 21155
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSSPGTRRAMPSKPRGEAMGELADTGAQVVDGARREAQAYRGDNPRPLGGYLAVLVVY CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH GLVVTAATLAALASGRSLPTRWRAQDLLILTLGTHKLSRTLTKDAVTSPLRAPFTHYAGT HHHHHHHHHHHHHCCCCCCCHHCCCCEEEEEECHHHHHHHHHHHHHHCCHHCCHHHHCCC GGPAEVQEEVREQSQLRHSLGELLTCPFCLDMWVATGFAIGLVFAPRYTRLVAGVFSVLT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GADFLQLGYAIAQQAAQG HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRRSSPGTRRAMPSKPRGEAMGELADTGAQVVDGARREAQAYRGDNPRPLGGYLAVLVVY CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH GLVVTAATLAALASGRSLPTRWRAQDLLILTLGTHKLSRTLTKDAVTSPLRAPFTHYAGT HHHHHHHHHHHHHCCCCCCCHHCCCCEEEEEECHHHHHHHHHHHHHHCCHHCCHHHHCCC GGPAEVQEEVREQSQLRHSLGELLTCPFCLDMWVATGFAIGLVFAPRYTRLVAGVFSVLT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GADFLQLGYAIAQQAAQG HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA