Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409364

Identifier: 41409364

GI number: 41409364

Start: 3627428

End: 3628024

Strand: Reverse

Name: 41409364

Synonym: MAP3266c

Alternate gene names: NA

Gene position: 3628024-3627428 (Counterclockwise)

Preceding gene: 41409365

Following gene: 41409362

Centisome position: 75.12

GC content: 72.36

Gene sequence:

>597_bases
TTGCGCCGGTCGAGTCCGGGTACCCGACGGGCTATGCCTTCCAAGCCTCGAGGTGAAGCGATGGGTGAGTTGGCCGACAC
CGGCGCCCAGGTGGTCGACGGCGCGCGGCGCGAAGCGCAGGCCTACCGCGGCGACAATCCCCGCCCGCTGGGCGGCTACC
TGGCGGTGCTGGTCGTCTACGGCCTGGTGGTGACGGCCGCGACGCTGGCCGCCCTGGCCAGTGGCCGCAGCCTGCCGACC
CGATGGCGCGCCCAGGACCTGCTGATCCTCACCCTGGGCACCCACAAGCTGTCGCGCACCCTGACCAAGGACGCGGTGAC
CAGCCCGCTGCGCGCGCCGTTCACCCACTACGCGGGCACCGGCGGCCCGGCCGAGGTGCAGGAGGAGGTCCGCGAGCAGA
GCCAGCTGCGGCACAGCCTGGGCGAGCTGCTGACCTGCCCGTTCTGCCTGGACATGTGGGTTGCCACCGGGTTCGCCATC
GGCCTGGTGTTCGCGCCGCGCTACACCCGGCTGGTCGCGGGCGTGTTCAGCGTGCTGACCGGTGCGGACTTTCTTCAGCT
CGGCTACGCGATCGCGCAGCAGGCGGCGCAGGGCTGA

Upstream 100 bases:

>100_bases
GGCGGCCAACACCGACCTGCGGTCGACCAACCGGGCGTTGCGGGAAGCCGCGAAGACCGCCGACGGCGACGCGGCCACCG
GCTGAGCCGCCGTCCCCGGG

Downstream 100 bases:

>100_bases
GCCGTCGCGCGCTCAGCCCGTCTTCGGCATCGGAATGCCCTCGCTGGCGGTGAATTGCGCGTCGTCCTCGGAGGACAGCC
CGATGGATACGACGGAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MRRSSPGTRRAMPSKPRGEAMGELADTGAQVVDGARREAQAYRGDNPRPLGGYLAVLVVYGLVVTAATLAALASGRSLPT
RWRAQDLLILTLGTHKLSRTLTKDAVTSPLRAPFTHYAGTGGPAEVQEEVREQSQLRHSLGELLTCPFCLDMWVATGFAI
GLVFAPRYTRLVAGVFSVLTGADFLQLGYAIAQQAAQG

Sequences:

>Translated_198_residues
MRRSSPGTRRAMPSKPRGEAMGELADTGAQVVDGARREAQAYRGDNPRPLGGYLAVLVVYGLVVTAATLAALASGRSLPT
RWRAQDLLILTLGTHKLSRTLTKDAVTSPLRAPFTHYAGTGGPAEVQEEVREQSQLRHSLGELLTCPFCLDMWVATGFAI
GLVFAPRYTRLVAGVFSVLTGADFLQLGYAIAQQAAQG
>Mature_198_residues
MRRSSPGTRRAMPSKPRGEAMGELADTGAQVVDGARREAQAYRGDNPRPLGGYLAVLVVYGLVVTAATLAALASGRSLPT
RWRAQDLLILTLGTHKLSRTLTKDAVTSPLRAPFTHYAGTGGPAEVQEEVREQSQLRHSLGELLTCPFCLDMWVATGFAI
GLVFAPRYTRLVAGVFSVLTGADFLQLGYAIAQQAAQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21155; Mature: 21155

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSSPGTRRAMPSKPRGEAMGELADTGAQVVDGARREAQAYRGDNPRPLGGYLAVLVVY
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
GLVVTAATLAALASGRSLPTRWRAQDLLILTLGTHKLSRTLTKDAVTSPLRAPFTHYAGT
HHHHHHHHHHHHHCCCCCCCHHCCCCEEEEEECHHHHHHHHHHHHHHCCHHCCHHHHCCC
GGPAEVQEEVREQSQLRHSLGELLTCPFCLDMWVATGFAIGLVFAPRYTRLVAGVFSVLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GADFLQLGYAIAQQAAQG
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRSSPGTRRAMPSKPRGEAMGELADTGAQVVDGARREAQAYRGDNPRPLGGYLAVLVVY
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
GLVVTAATLAALASGRSLPTRWRAQDLLILTLGTHKLSRTLTKDAVTSPLRAPFTHYAGT
HHHHHHHHHHHHHCCCCCCCHHCCCCEEEEEECHHHHHHHHHHHHHHCCHHCCHHHHCCC
GGPAEVQEEVREQSQLRHSLGELLTCPFCLDMWVATGFAIGLVFAPRYTRLVAGVFSVLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GADFLQLGYAIAQQAAQG
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA