| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is ydjG [C]
Identifier: 41409358
GI number: 41409358
Start: 3619613
End: 3620587
Strand: Direct
Name: ydjG [C]
Synonym: MAP3260
Alternate gene names: 41409358
Gene position: 3619613-3620587 (Clockwise)
Preceding gene: 41409357
Following gene: 41409363
Centisome position: 74.94
GC content: 71.69
Gene sequence:
>975_bases ATGAAATACGTTGACGTCGACGGGGTCGGCCGCCTCAGCCGGATCGGGTTGGGCACCTGGCAGTTCGGCTCCCGCGAGTG GGGCTACGGGGACAGCTACGCCGCCGATGCCGCGGGCGACATCGTGCGCCGCGCGCTGGCATTGGGTGTGACGCTGTTCG ACACCGCCGAGATCTACGGGTTCGGCAAGAGCGAGCGGATCCTGGGCGACGCGCTCGGCGAGCAGCGCGCCGAGGTGGCG GTGGCCAGCAAGATCATGCCGGTGGCCCCCTTCCCCGCGGTGGTCAGGCAACGCGCGCGGGCCAGCGCCCGGCGGCTCGG ACTGGACCGCATCCCGCTCTACCAGGTGCACCAGCCCAACCCGGTGTTCCCCGATTCGGTGATCATGCCCGGCATGCGCG ACCTGCTGGACAGCGGCGAGATCGGCGCCGCCGGGGTCTCCAACTATTCGCTGCAGCGCTGGCGGAAGGCCGACGCGGCG CTGGGCCGGCCGGTGATCAGCAACCAGGTGCACTTCTCGCTCGCCTACCCCAAGGCGCTGAAGAACCTGGTGCCGTTCGC CGAACGGGAGAACCGCATCGTCATCGCCTACAGCCCGCTGGAACAGGGTCTGCTGGGCGGCAAGTACGGCGTCGACAACC GGCCGGGCGGCGTGCGCGCAGTCAACGCGCTGTTCGGCACCGAGAACCTGCGCCGCATCGAGCCGCTGCTGCAGCTGCTG CGCGACGTCGCGGCCCAGGTCGACGCCAAGCCCGCCCAGGTGGCGCTGGCCTGGCTGATCAGCTACCCGGGGGTGGTCGC CATTCCCGGCGCCTCCAGCGTCGAGCAGCTGGAATTCAACGTCGCCGCCGCCGACATCGAGCTGCCCGCCGAGTCGCGGG ACGCGCTCACCGACGCGGCGCTGGCCTTCCGGCCCACGTCGGCCGCGCGGTTCCTGACCGACCTGGCCCGGGAGCGGATC CCCGGCCGGGGCTAG
Upstream 100 bases:
>100_bases ACAGCGAGCGGGCCCGGCTGGCCGCGGTCAGCATCGCCAACTACATCCTCGGCAAGATTCCCGGCTGAGCGGCCCGCCCA CCGATCAGTAGGCTGGGCGG
Downstream 100 bases:
>100_bases GTCTGGCTTACGACTGGCTCAGGACTGATTGGCCTCGGCGAACGCGGCCTGGCTGGCGGGCGCGCCACGCGCCACCACCA GCGGCATCGAGGTCGAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MKYVDVDGVGRLSRIGLGTWQFGSREWGYGDSYAADAAGDIVRRALALGVTLFDTAEIYGFGKSERILGDALGEQRAEVA VASKIMPVAPFPAVVRQRARASARRLGLDRIPLYQVHQPNPVFPDSVIMPGMRDLLDSGEIGAAGVSNYSLQRWRKADAA LGRPVISNQVHFSLAYPKALKNLVPFAERENRIVIAYSPLEQGLLGGKYGVDNRPGGVRAVNALFGTENLRRIEPLLQLL RDVAAQVDAKPAQVALAWLISYPGVVAIPGASSVEQLEFNVAAADIELPAESRDALTDAALAFRPTSAARFLTDLARERI PGRG
Sequences:
>Translated_324_residues MKYVDVDGVGRLSRIGLGTWQFGSREWGYGDSYAADAAGDIVRRALALGVTLFDTAEIYGFGKSERILGDALGEQRAEVA VASKIMPVAPFPAVVRQRARASARRLGLDRIPLYQVHQPNPVFPDSVIMPGMRDLLDSGEIGAAGVSNYSLQRWRKADAA LGRPVISNQVHFSLAYPKALKNLVPFAERENRIVIAYSPLEQGLLGGKYGVDNRPGGVRAVNALFGTENLRRIEPLLQLL RDVAAQVDAKPAQVALAWLISYPGVVAIPGASSVEQLEFNVAAADIELPAESRDALTDAALAFRPTSAARFLTDLARERI PGRG >Mature_324_residues MKYVDVDGVGRLSRIGLGTWQFGSREWGYGDSYAADAAGDIVRRALALGVTLFDTAEIYGFGKSERILGDALGEQRAEVA VASKIMPVAPFPAVVRQRARASARRLGLDRIPLYQVHQPNPVFPDSVIMPGMRDLLDSGEIGAAGVSNYSLQRWRKADAA LGRPVISNQVHFSLAYPKALKNLVPFAERENRIVIAYSPLEQGLLGGKYGVDNRPGGVRAVNALFGTENLRRIEPLLQLL RDVAAQVDAKPAQVALAWLISYPGVVAIPGASSVEQLEFNVAAADIELPAESRDALTDAALAFRPTSAARFLTDLARERI PGRG
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=327, Percent_Identity=25.3822629969419, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI4504825, Length=327, Percent_Identity=25.3822629969419, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI27436964, Length=339, Percent_Identity=25.6637168141593, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI27436971, Length=315, Percent_Identity=27.9365079365079, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI27436962, Length=339, Percent_Identity=25.3687315634218, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI27436966, Length=328, Percent_Identity=25.3048780487805, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI1788070, Length=302, Percent_Identity=33.4437086092715, Blast_Score=117, Evalue=8e-28, Organism=Escherichia coli, GI87081735, Length=295, Percent_Identity=30.1694915254237, Blast_Score=111, Evalue=8e-26, Organism=Escherichia coli, GI1788081, Length=294, Percent_Identity=29.2517006802721, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1789375, Length=315, Percent_Identity=28.8888888888889, Blast_Score=81, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17566692, Length=298, Percent_Identity=25.1677852348993, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24644950, Length=338, Percent_Identity=29.2899408284024, Blast_Score=89, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 34973; Mature: 34973
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYVDVDGVGRLSRIGLGTWQFGSREWGYGDSYAADAAGDIVRRALALGVTLFDTAEIYG CCEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHEECHHHHC FGKSERILGDALGEQRAEVAVASKIMPVAPFPAVVRQRARASARRLGLDRIPLYQVHQPN CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCC PVFPDSVIMPGMRDLLDSGEIGAAGVSNYSLQRWRKADAALGRPVISNQVHFSLAYPKAL CCCCCHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHCCCEEEEEECHHHH KNLVPFAERENRIVIAYSPLEQGLLGGKYGVDNRPGGVRAVNALFGTENLRRIEPLLQLL HHHCCHHCCCCEEEEEECCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHH RDVAAQVDAKPAQVALAWLISYPGVVAIPGASSVEQLEFNVAAADIELPAESRDALTDAA HHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHEEEEEEEEEECCCCHHHHHHHHH LAFRPTSAARFLTDLARERIPGRG HHCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKYVDVDGVGRLSRIGLGTWQFGSREWGYGDSYAADAAGDIVRRALALGVTLFDTAEIYG CCEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHEECHHHHC FGKSERILGDALGEQRAEVAVASKIMPVAPFPAVVRQRARASARRLGLDRIPLYQVHQPN CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCC PVFPDSVIMPGMRDLLDSGEIGAAGVSNYSLQRWRKADAALGRPVISNQVHFSLAYPKAL CCCCCHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHCCCEEEEEECHHHH KNLVPFAERENRIVIAYSPLEQGLLGGKYGVDNRPGGVRAVNALFGTENLRRIEPLLQLL HHHCCHHCCCCEEEEEECCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHH RDVAAQVDAKPAQVALAWLISYPGVVAIPGASSVEQLEFNVAAADIELPAESRDALTDAA HHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHEEEEEEEEEECCCCHHHHHHHHH LAFRPTSAARFLTDLARERIPGRG HHCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]