| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is pknJ
Identifier: 41409357
GI number: 41409357
Start: 3618579
End: 3619580
Strand: Direct
Name: pknJ
Synonym: MAP3259
Alternate gene names: 41409357
Gene position: 3618579-3619580 (Clockwise)
Preceding gene: 41409356
Following gene: 41409358
Centisome position: 74.92
GC content: 73.65
Gene sequence:
>1002_bases GTGACCAACCAGCAGGATCCGTATTGGCGCAACCCGCTGAGTTACGACCCGCTCGGCCGGGTCCCGCCGCCCGAACCCGA GCCCGTCGGCCCGCCGCCGGCGCAACCAGCCACGCTCGCACCGCCGTACCGCCCGGGCGTCAACACGTTGGCGACGCTGT CGCTGGTCTTCGCGTTCCTGTTCGCGCCCGCGGGCGCGGTGCTGGGTCACCTCGGGCTGGCGCAGATCCGCCGCACCGGC GAACTCGGCCGGGACCGCGCGCTGGTGGGCGTCACCCTGTCGTACGTGTTCATCCTGCTGGCGGTGGTCGCGCTGGCCGG GTGGGCCACGCTGGGCGGGTCCACCGCCGCCCACCGCGCCGCGCACGAGGCCACCACGTCGGCCGGGCCGCCACCGCCCA CGGTGCCGCCGGACACCATCACCACCCTGCTGCCCGGGCTGGACGCGCTGCGCAACATCACCGCCGACGCCAACCTCGAC GTCGGCCCGACCTGGAACAGCCCGGGCCGCTCGGCGCAGGACGGCAGCATCGACCGCCCCGAATGCTGGGGCAGCATCGC CGCCGGCAGCCCGGACGCCTACACCCCCGGCGCCTTCACCGGCTATCACGCCGGCGAATTCACCGACACCCGCAGCATGC TGAAGTCGATCCAGGTCATCCAGGGCGTGGCGGCGTTCCGCGACGCGCCCGGCGCGCAGGCGCAACTGGACGCGCTGCTG GCCGGGTGGCGCCAGTGCGGCGGCTCGACGGTAACCGTGACGGCGCCGGGCGGGCAGCCGATCGCGATGGCGTTGAGCAC ACCGGCCGACGCCGGCAACGGCATCACCACTTTGGACCTGACGCCCAAGGGAATTCAGGTGCGCTCCGCGCGGGCGGTCG CGGCCAAGGCCAACGTCGTCGTCGACCTGAACGTGTCGGCCAGCGGCACGACCGACAGCGAGCGGGCCCGGCTGGCCGCG GTCAGCATCGCCAACTACATCCTCGGCAAGATTCCCGGCTGA
Upstream 100 bases:
>100_bases CGCCAAGCCGCGGCTGTGACGGGTTCGGTTTGGGCACCGGGCCCGCTCGGCTACATTTCGGGCAGGTTCGGCCGCCGAGG AGGCCCCTAGGAGGCGCTGC
Downstream 100 bases:
>100_bases GCGGCCCGCCCACCGATCAGTAGGCTGGGCGGATGAAATACGTTGACGTCGACGGGGTCGGCCGCCTCAGCCGGATCGGG TTGGGCACCTGGCAGTTCGG
Product: PknJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MTNQQDPYWRNPLSYDPLGRVPPPEPEPVGPPPAQPATLAPPYRPGVNTLATLSLVFAFLFAPAGAVLGHLGLAQIRRTG ELGRDRALVGVTLSYVFILLAVVALAGWATLGGSTAAHRAAHEATTSAGPPPPTVPPDTITTLLPGLDALRNITADANLD VGPTWNSPGRSAQDGSIDRPECWGSIAAGSPDAYTPGAFTGYHAGEFTDTRSMLKSIQVIQGVAAFRDAPGAQAQLDALL AGWRQCGGSTVTVTAPGGQPIAMALSTPADAGNGITTLDLTPKGIQVRSARAVAAKANVVVDLNVSASGTTDSERARLAA VSIANYILGKIPG
Sequences:
>Translated_333_residues MTNQQDPYWRNPLSYDPLGRVPPPEPEPVGPPPAQPATLAPPYRPGVNTLATLSLVFAFLFAPAGAVLGHLGLAQIRRTG ELGRDRALVGVTLSYVFILLAVVALAGWATLGGSTAAHRAAHEATTSAGPPPPTVPPDTITTLLPGLDALRNITADANLD VGPTWNSPGRSAQDGSIDRPECWGSIAAGSPDAYTPGAFTGYHAGEFTDTRSMLKSIQVIQGVAAFRDAPGAQAQLDALL AGWRQCGGSTVTVTAPGGQPIAMALSTPADAGNGITTLDLTPKGIQVRSARAVAAKANVVVDLNVSASGTTDSERARLAA VSIANYILGKIPG >Mature_332_residues TNQQDPYWRNPLSYDPLGRVPPPEPEPVGPPPAQPATLAPPYRPGVNTLATLSLVFAFLFAPAGAVLGHLGLAQIRRTGE LGRDRALVGVTLSYVFILLAVVALAGWATLGGSTAAHRAAHEATTSAGPPPPTVPPDTITTLLPGLDALRNITADANLDV GPTWNSPGRSAQDGSIDRPECWGSIAAGSPDAYTPGAFTGYHAGEFTDTRSMLKSIQVIQGVAAFRDAPGAQAQLDALLA GWRQCGGSTVTVTAPGGQPIAMALSTPADAGNGITTLDLTPKGIQVRSARAVAAKANVVVDLNVSASGTTDSERARLAAV SIANYILGKIPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017442 - InterPro: IPR008271 [H]
Pfam domain/function: PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 34129; Mature: 33998
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNQQDPYWRNPLSYDPLGRVPPPEPEPVGPPPAQPATLAPPYRPGVNTLATLSLVFAFL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH FAPAGAVLGHLGLAQIRRTGELGRDRALVGVTLSYVFILLAVVALAGWATLGGSTAAHRA HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH AHEATTSAGPPPPTVPPDTITTLLPGLDALRNITADANLDVGPTWNSPGRSAQDGSIDRP HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCH ECWGSIAAGSPDAYTPGAFTGYHAGEFTDTRSMLKSIQVIQGVAAFRDAPGAQAQLDALL HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AGWRQCGGSTVTVTAPGGQPIAMALSTPADAGNGITTLDLTPKGIQVRSARAVAAKANVV HHHHHCCCCEEEEECCCCCEEEEEEECCCCCCCCEEEEEECCCCCEEECHHHEEEECEEE VDLNVSASGTTDSERARLAAVSIANYILGKIPG EEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TNQQDPYWRNPLSYDPLGRVPPPEPEPVGPPPAQPATLAPPYRPGVNTLATLSLVFAFL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH FAPAGAVLGHLGLAQIRRTGELGRDRALVGVTLSYVFILLAVVALAGWATLGGSTAAHRA HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH AHEATTSAGPPPPTVPPDTITTLLPGLDALRNITADANLDVGPTWNSPGRSAQDGSIDRP HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCH ECWGSIAAGSPDAYTPGAFTGYHAGEFTDTRSMLKSIQVIQGVAAFRDAPGAQAQLDALL HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AGWRQCGGSTVTVTAPGGQPIAMALSTPADAGNGITTLDLTPKGIQVRSARAVAAKANVV HHHHHCCCCEEEEECCCCCEEEEEEECCCCCCCCEEEEEECCCCCEEECHHHEEEECEEE VDLNVSASGTTDSERARLAAVSIANYILGKIPG EEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]