Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409356

Identifier: 41409356

GI number: 41409356

Start: 3617373

End: 3618497

Strand: Direct

Name: 41409356

Synonym: MAP3258

Alternate gene names: NA

Gene position: 3617373-3618497 (Clockwise)

Preceding gene: 41409353

Following gene: 41409357

Centisome position: 74.9

GC content: 73.33

Gene sequence:

>1125_bases
GTGGCGGTGGCCAGGCGGGGTATGCCCTGGAAAAACAGGGCGGGAGGCAAAAGTTGCGCGCGGGAGTTGGGTCCCGGTGT
GGTGCTGCGCGGCGGCGCGCTGACGGGCGTGCTGGCGGTGAGCGTCGGCGCGCTGGTCATGAGCGTGGCCTGCTCGCGGC
CCGGCGCGGCGACCGAAAGCGCGCCCGAGCTGACGGTCTGGCCGGTCGGCACGGCGCTGCACCAGCCGGTGTGGTCGTAT
CGCGGGCACGCCCTGGTGGCCGTCACCGAGGATCAGCGGGTGGCCGAGGTCGCCGAAGACCGCGCCGCGGCGGCGACCAC
CCGGCTGTCGGCGCCGCTGGCGGCGGGACGCAATCTGCAGATCAGCACCAAGGATCCGGCGGTGGTGTTCGTGCCGCAGC
CCGCGCGCGGCCGGGTGGCCGTCGTCGATCTGCAAAGTCTGCGTCAGGTGGGCGATTTCGACGCCGGTCCCGCCCCGGCC
TACCTGTCCGAGGACGCCGGGTTGCGGATGCTGCTGGCGCTGTCGTCGGACGGCCGGTCGGTGACCCCGGTCGATCAGTA
CGGCTACCGCAAGCTGGCGACCGCACCGATCGCCGGCGCCCCCGCCGAGGTCATCGACGGCGCCAACCGCGGCCGCGAAA
TCGACTACCACGTCTACGCGCCGTCCGGGATCCGGCATTACCAGGGCCCCGATTCCCCGGCGCCGCAACGCGGTTCGCTG
GACATCGACGTCGCGGTCTCCGCCGGCGACGGCACCGCGGTGACCCGCAGCTATGTGGCCGGCCACGACGACGCCGTGCT
GTACGCGGTGGACTCGCGCCGCGGCGGGCAAGGGATAGAGGTGCTGGCCAGCACCCGGCTGCCCGCCCCGATCCGGGCGC
TGGGCACCGACGACACCCGCATCTACGCGGCCACCGACCGGCAGCTGGTGACCCTGGAAACGGCGAGCTTCACCGGGTTT
CCGGCCCGGCACATTCCGGTGCTGCGCACCGTCGACTACCGCTCGGCGCTGCCCGAGTCCGCGCGCCGAGCCCCACTCTC
CGGCATGGCCGTCGGGCCGCATCGGGTCTACCTGACCTTGGCCCAGGCGCCCTTTGTGGTCGGCATCGCCAAGCCGCGGC
TGTGA

Upstream 100 bases:

>100_bases
GTCGGTGCCATGCTGTCCCTCCCATCTGCTCTGGTTCGGCGCGCAGGGCTGTTGCGCGCTCTGGTTGCGGCTACCCGAGC
CACCCGGGGGTCAAACGGGT

Downstream 100 bases:

>100_bases
CGGGTTCGGTTTGGGCACCGGGCCCGCTCGGCTACATTTCGGGCAGGTTCGGCCGCCGAGGAGGCCCCTAGGAGGCGCTG
CGTGACCAACCAGCAGGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MAVARRGMPWKNRAGGKSCARELGPGVVLRGGALTGVLAVSVGALVMSVACSRPGAATESAPELTVWPVGTALHQPVWSY
RGHALVAVTEDQRVAEVAEDRAAAATTRLSAPLAAGRNLQISTKDPAVVFVPQPARGRVAVVDLQSLRQVGDFDAGPAPA
YLSEDAGLRMLLALSSDGRSVTPVDQYGYRKLATAPIAGAPAEVIDGANRGREIDYHVYAPSGIRHYQGPDSPAPQRGSL
DIDVAVSAGDGTAVTRSYVAGHDDAVLYAVDSRRGGQGIEVLASTRLPAPIRALGTDDTRIYAATDRQLVTLETASFTGF
PARHIPVLRTVDYRSALPESARRAPLSGMAVGPHRVYLTLAQAPFVVGIAKPRL

Sequences:

>Translated_374_residues
MAVARRGMPWKNRAGGKSCARELGPGVVLRGGALTGVLAVSVGALVMSVACSRPGAATESAPELTVWPVGTALHQPVWSY
RGHALVAVTEDQRVAEVAEDRAAAATTRLSAPLAAGRNLQISTKDPAVVFVPQPARGRVAVVDLQSLRQVGDFDAGPAPA
YLSEDAGLRMLLALSSDGRSVTPVDQYGYRKLATAPIAGAPAEVIDGANRGREIDYHVYAPSGIRHYQGPDSPAPQRGSL
DIDVAVSAGDGTAVTRSYVAGHDDAVLYAVDSRRGGQGIEVLASTRLPAPIRALGTDDTRIYAATDRQLVTLETASFTGF
PARHIPVLRTVDYRSALPESARRAPLSGMAVGPHRVYLTLAQAPFVVGIAKPRL
>Mature_373_residues
AVARRGMPWKNRAGGKSCARELGPGVVLRGGALTGVLAVSVGALVMSVACSRPGAATESAPELTVWPVGTALHQPVWSYR
GHALVAVTEDQRVAEVAEDRAAAATTRLSAPLAAGRNLQISTKDPAVVFVPQPARGRVAVVDLQSLRQVGDFDAGPAPAY
LSEDAGLRMLLALSSDGRSVTPVDQYGYRKLATAPIAGAPAEVIDGANRGREIDYHVYAPSGIRHYQGPDSPAPQRGSLD
IDVAVSAGDGTAVTRSYVAGHDDAVLYAVDSRRGGQGIEVLASTRLPAPIRALGTDDTRIYAATDRQLVTLETASFTGFP
ARHIPVLRTVDYRSALPESARRAPLSGMAVGPHRVYLTLAQAPFVVGIAKPRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39173; Mature: 39042

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVARRGMPWKNRAGGKSCARELGPGVVLRGGALTGVLAVSVGALVMSVACSRPGAATES
CCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
APELTVWPVGTALHQPVWSYRGHALVAVTEDQRVAEVAEDRAAAATTRLSAPLAAGRNLQ
CCCEEEEECCHHHHCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHCCCEEE
ISTKDPAVVFVPQPARGRVAVVDLQSLRQVGDFDAGPAPAYLSEDAGLRMLLALSSDGRS
EECCCCEEEEECCCCCCCEEEEEHHHHHHHCCCCCCCCCCEECCCCCEEEEEEECCCCCE
VTPVDQYGYRKLATAPIAGAPAEVIDGANRGREIDYHVYAPSGIRHYQGPDSPAPQRGSL
ECCHHHHCCCEECCCCCCCCCHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCE
DIDVAVSAGDGTAVTRSYVAGHDDAVLYAVDSRRGGQGIEVLASTRLPAPIRALGTDDTR
EEEEEEECCCCCHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEECCCCCCE
IYAATDRQLVTLETASFTGFPARHIPVLRTVDYRSALPESARRAPLSGMAVGPHRVYLTL
EEEECCCEEEEEEECCCCCCCHHCCCEEEEECHHHHCCHHHHCCCCCCEEECCCEEEEEE
AQAPFVVGIAKPRL
ECCCEEEEECCCCC
>Mature Secondary Structure 
AVARRGMPWKNRAGGKSCARELGPGVVLRGGALTGVLAVSVGALVMSVACSRPGAATES
CCCCCCCCCCCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
APELTVWPVGTALHQPVWSYRGHALVAVTEDQRVAEVAEDRAAAATTRLSAPLAAGRNLQ
CCCEEEEECCHHHHCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHCCCEEE
ISTKDPAVVFVPQPARGRVAVVDLQSLRQVGDFDAGPAPAYLSEDAGLRMLLALSSDGRS
EECCCCEEEEECCCCCCCEEEEEHHHHHHHCCCCCCCCCCEECCCCCEEEEEEECCCCCE
VTPVDQYGYRKLATAPIAGAPAEVIDGANRGREIDYHVYAPSGIRHYQGPDSPAPQRGSL
ECCHHHHCCCEECCCCCCCCCHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCE
DIDVAVSAGDGTAVTRSYVAGHDDAVLYAVDSRRGGQGIEVLASTRLPAPIRALGTDDTR
EEEEEEECCCCCHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEECCCCCCE
IYAATDRQLVTLETASFTGFPARHIPVLRTVDYRSALPESARRAPLSGMAVGPHRVYLTL
EEEECCCEEEEEEECCCCCCCHHCCCEEEEECHHHHCCHHHHCCCCCCEEECCCEEEEEE
AQAPFVVGIAKPRL
ECCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA