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The map label for this gene is 41409337

Identifier: 41409337

GI number: 41409337

Start: 3595286

End: 3596044

Strand: Direct

Name: 41409337

Synonym: MAP3239

Alternate gene names: NA

Gene position: 3595286-3596044 (Clockwise)

Preceding gene: 41409336

Following gene: 41409338

Centisome position: 74.44

GC content: 73.12

Gene sequence:

>759_bases
GTGCCGGCGGGCAGCCGGGCCAGGTTCGCTGCCAAGCCGCTGACCCACAGCGGCACCCCGGTCCCGTTGTGGCTGGCCGC
TTTTCAAGAAGCGCCGCTGCCCGCCCTGGATCTGGCCGGCTGTCCCGGCCTGGTCGTCGTCGCCGCCCACCCCGACGACG
AAACACTCGGTGTGGGCGCGATGATCACCCAGCTGGTGGCGATCGGCGTTCGCGTGCAGGTGGTCTGCGTCAGCGACGGC
GGGGCAAGGCCCGGCTCCGCGGCATCGGAGCGGCTTCGCGCCCAGACCATCCGCAGATTCGAATTACGGTCGGCGACAAA
CACATTGAACGCTCCTCCCCCGCTGTCGCTGGGCCTTCCGGGCGGCGAGTTGACCGCTCACGAGGACCGCCTCACCGGGG
CGTTGACCGAGATCCTGCGCGCCGCCGGGCCCGGTGCCTGGTGCGCGGCGCCGTGGCGCGGCGACGGGCATCCCGATCAC
GAGGCGGTGGGACACGCCGCGTGGGCCGCCTGCGCGCACACCGGGGCCGCGCTGCTGGAATATCCGGTGTGGATGTGGCA
CTGGGCCGTTCCGGGCGACCCGGCGGTACCGTGGGAGCGGGCCCATGCGGTGCCCGCGCCGGCCTGGGCGGTGAGTCGCA
AACGCCTCGCCGCGCAACGGTATCGCAGCCGATTCGAGCCCACCGGCGGCTCGGCCCCCGCGCTGCCGGGGTTCGTGCTG
GCGCGGTTGCTGGCGGTGGGCGAGGTGGTTTTTCGGTAA

Upstream 100 bases:

>100_bases
CCGACCTGAGCATCTACATCCGGCAAAGCCACGCCGAGCGCGACCTGGCCGAACTCGGCCGGCTGGCCGGACGGCGGGCG
GTGCGGGCGCCGTGACGACC

Downstream 100 bases:

>100_bases
CCCGCTGGGGCGCACGGCGCGGGGGGTGACCGTACGAGGGGAAAGTGAGCGGCCGAAAAGCTATGCGTGTGGCGACCTTC
AACATCCTGCACGGTCGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: LmbE-Like Protein; LmbE Protein; N-Acetylglucosaminylphosphatidylinositol Deacetylase; Gpi Deacetylase; GlcNAc-PI De-N-Acetylase Family Protein; Acyl-CoA Dehydrogenase/Methyltransferase

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MPAGSRARFAAKPLTHSGTPVPLWLAAFQEAPLPALDLAGCPGLVVVAAHPDDETLGVGAMITQLVAIGVRVQVVCVSDG
GARPGSAASERLRAQTIRRFELRSATNTLNAPPPLSLGLPGGELTAHEDRLTGALTEILRAAGPGAWCAAPWRGDGHPDH
EAVGHAAWAACAHTGAALLEYPVWMWHWAVPGDPAVPWERAHAVPAPAWAVSRKRLAAQRYRSRFEPTGGSAPALPGFVL
ARLLAVGEVVFR

Sequences:

>Translated_252_residues
MPAGSRARFAAKPLTHSGTPVPLWLAAFQEAPLPALDLAGCPGLVVVAAHPDDETLGVGAMITQLVAIGVRVQVVCVSDG
GARPGSAASERLRAQTIRRFELRSATNTLNAPPPLSLGLPGGELTAHEDRLTGALTEILRAAGPGAWCAAPWRGDGHPDH
EAVGHAAWAACAHTGAALLEYPVWMWHWAVPGDPAVPWERAHAVPAPAWAVSRKRLAAQRYRSRFEPTGGSAPALPGFVL
ARLLAVGEVVFR
>Mature_251_residues
PAGSRARFAAKPLTHSGTPVPLWLAAFQEAPLPALDLAGCPGLVVVAAHPDDETLGVGAMITQLVAIGVRVQVVCVSDGG
ARPGSAASERLRAQTIRRFELRSATNTLNAPPPLSLGLPGGELTAHEDRLTGALTEILRAAGPGAWCAAPWRGDGHPDHE
AVGHAAWAACAHTGAALLEYPVWMWHWAVPGDPAVPWERAHAVPAPAWAVSRKRLAAQRYRSRFEPTGGSAPALPGFVLA
RLLAVGEVVFR

Specific function: Unknown

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26418; Mature: 26287

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAGSRARFAAKPLTHSGTPVPLWLAAFQEAPLPALDLAGCPGLVVVAAHPDDETLGVGA
CCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCEEEEEECCCCCCHHHHH
MITQLVAIGVRVQVVCVSDGGARPGSAASERLRAQTIRRFELRSATNTLNAPPPLSLGLP
HHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCC
GGELTAHEDRLTGALTEILRAAGPGAWCAAPWRGDGHPDHEAVGHAAWAACAHTGAALLE
CCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCHHHHH
YPVWMWHWAVPGDPAVPWERAHAVPAPAWAVSRKRLAAQRYRSRFEPTGGSAPALPGFVL
CCCEEEEECCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
ARLLAVGEVVFR
HHHHHHHHHHCC
>Mature Secondary Structure 
PAGSRARFAAKPLTHSGTPVPLWLAAFQEAPLPALDLAGCPGLVVVAAHPDDETLGVGA
CCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCEEEEEECCCCCCHHHHH
MITQLVAIGVRVQVVCVSDGGARPGSAASERLRAQTIRRFELRSATNTLNAPPPLSLGLP
HHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCC
GGELTAHEDRLTGALTEILRAAGPGAWCAAPWRGDGHPDHEAVGHAAWAACAHTGAALLE
CCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCHHHHH
YPVWMWHWAVPGDPAVPWERAHAVPAPAWAVSRKRLAAQRYRSRFEPTGGSAPALPGFVL
CCCEEEEECCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
ARLLAVGEVVFR
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA