Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409338

Identifier: 41409338

GI number: 41409338

Start: 3596089

End: 3596871

Strand: Direct

Name: 41409338

Synonym: MAP3240

Alternate gene names: NA

Gene position: 3596089-3596871 (Clockwise)

Preceding gene: 41409337

Following gene: 41409339

Centisome position: 74.46

GC content: 70.24

Gene sequence:

>783_bases
GTGAGCGGCCGAAAAGCTATGCGTGTGGCGACCTTCAACATCCTGCACGGTCGCACCGTCTGCGACGGCGTCAACGTGGA
GCGGCTGCGGGACTGCATACGCCGGCTCGATCCGGACGTGCTCAGCCTGCAGGAGGTGGACTGCGACCAACCCCGGTCCG
AACACGCCGATCTGACCGGCGCGGCGGCCGAGGCCATGGGCGCGGTGGAACACCGCTTCGTGGCGGCGATTTCGGGCACG
CCGGGGGCCACCTGGATGGCGGCCACCGGCGACGAGCAGCCCGGCACCGCCGCCTACGGGATCGCGCTGCTGTCCCGGTA
TCCGGTGGCCAGCTGGCAGGTGCTGCGGTTACCCCGCATTCCGATGCGATTTCCGATGTACCTGCCCGGCCCCAACCGGG
TGATGATCGTCGACGAGGAACCGCGCGCCGCCGTCATCGCGCAGCTGCGCACCCCGATCGGCGAACTCACGGTGGCCAAC
ACCCACCTGTCCTTCGTTCCCGGCTGGAACCGGCGCCAGCTGCGCCGGCTGATTCGCGACCTGCGCGGCTTGCCCGGGCC
GCGGCTGCTGACCGGGGACCTGAACATGACGCCGCAGACGGTGCGCCGCTGGTCGGGGATGCGGGCGCTGGGCAACGCCA
AAACCTTTCCGGCGGACAACCCCAACCGCCAGCTCGACCACATCCTGACCGATGATCGCCGGCTGCGCTGCGCCGCCGTG
CAGGCCGACCTGATGCCGATCTCGGATCACCGCCCGTTGGTGGTGGACCTGCAGCGGGTGTGA

Upstream 100 bases:

>100_bases
TGCCGGGGTTCGTGCTGGCGCGGTTGCTGGCGGTGGGCGAGGTGGTTTTTCGGTAACCCGCTGGGGCGCACGGCGCGGGG
GGTGACCGTACGAGGGGAAA

Downstream 100 bases:

>100_bases
CGGCTCATCGCCGCCAGCACCCGCTCGACGTCGCCCGGGGCGGGTAGCTCGTCGGCGATGCGGACGATCTGCGCGCCGAT
CTCGGCCGCGTCGATCCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MSGRKAMRVATFNILHGRTVCDGVNVERLRDCIRRLDPDVLSLQEVDCDQPRSEHADLTGAAAEAMGAVEHRFVAAISGT
PGATWMAATGDEQPGTAAYGIALLSRYPVASWQVLRLPRIPMRFPMYLPGPNRVMIVDEEPRAAVIAQLRTPIGELTVAN
THLSFVPGWNRRQLRRLIRDLRGLPGPRLLTGDLNMTPQTVRRWSGMRALGNAKTFPADNPNRQLDHILTDDRRLRCAAV
QADLMPISDHRPLVVDLQRV

Sequences:

>Translated_260_residues
MSGRKAMRVATFNILHGRTVCDGVNVERLRDCIRRLDPDVLSLQEVDCDQPRSEHADLTGAAAEAMGAVEHRFVAAISGT
PGATWMAATGDEQPGTAAYGIALLSRYPVASWQVLRLPRIPMRFPMYLPGPNRVMIVDEEPRAAVIAQLRTPIGELTVAN
THLSFVPGWNRRQLRRLIRDLRGLPGPRLLTGDLNMTPQTVRRWSGMRALGNAKTFPADNPNRQLDHILTDDRRLRCAAV
QADLMPISDHRPLVVDLQRV
>Mature_259_residues
SGRKAMRVATFNILHGRTVCDGVNVERLRDCIRRLDPDVLSLQEVDCDQPRSEHADLTGAAAEAMGAVEHRFVAAISGTP
GATWMAATGDEQPGTAAYGIALLSRYPVASWQVLRLPRIPMRFPMYLPGPNRVMIVDEEPRAAVIAQLRTPIGELTVANT
HLSFVPGWNRRQLRRLIRDLRGLPGPRLLTGDLNMTPQTVRRWSGMRALGNAKTFPADNPNRQLDHILTDDRRLRCAAVQ
ADLMPISDHRPLVVDLQRV

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28917; Mature: 28786

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGRKAMRVATFNILHGRTVCDGVNVERLRDCIRRLDPDVLSLQEVDCDQPRSEHADLTG
CCCCCEEEEEEEEEECCCEEECCCCHHHHHHHHHHCCCCCEEHHHCCCCCCCCCCCCCHH
AAAEAMGAVEHRFVAAISGTPGATWMAATGDEQPGTAAYGIALLSRYPVASWQVLRLPRI
HHHHHHHHHHHEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCC
PMRFPMYLPGPNRVMIVDEEPRAAVIAQLRTPIGELTVANTHLSFVPGWNRRQLRRLIRD
CCCCCEEECCCCEEEEEECCCCHHHHHHHHCCCCCEEEECCEEEECCCCCHHHHHHHHHH
LRGLPGPRLLTGDLNMTPQTVRRWSGMRALGNAKTFPADNPNRQLDHILTDDRRLRCAAV
HHCCCCCEEEECCCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEE
QADLMPISDHRPLVVDLQRV
EECCEECCCCCCEEEEEECC
>Mature Secondary Structure 
SGRKAMRVATFNILHGRTVCDGVNVERLRDCIRRLDPDVLSLQEVDCDQPRSEHADLTG
CCCCEEEEEEEEEECCCEEECCCCHHHHHHHHHHCCCCCEEHHHCCCCCCCCCCCCCHH
AAAEAMGAVEHRFVAAISGTPGATWMAATGDEQPGTAAYGIALLSRYPVASWQVLRLPRI
HHHHHHHHHHHEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCC
PMRFPMYLPGPNRVMIVDEEPRAAVIAQLRTPIGELTVANTHLSFVPGWNRRQLRRLIRD
CCCCCEEECCCCEEEEEECCCCHHHHHHHHCCCCCEEEECCEEEECCCCCHHHHHHHHHH
LRGLPGPRLLTGDLNMTPQTVRRWSGMRALGNAKTFPADNPNRQLDHILTDDRRLRCAAV
HHCCCCCEEEECCCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEE
QADLMPISDHRPLVVDLQRV
EECCEECCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA