| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409290
Identifier: 41409290
GI number: 41409290
Start: 3543108
End: 3544283
Strand: Direct
Name: 41409290
Synonym: MAP3192
Alternate gene names: NA
Gene position: 3543108-3544283 (Clockwise)
Preceding gene: 41409289
Following gene: 41409291
Centisome position: 73.36
GC content: 67.09
Gene sequence:
>1176_bases ATGAAACACGAATACGACCGCATCCCCTATCTGGTTGCCTTCCAGAACAATTCGGGCGTCCGGGATGTCTACGGCGGGCT GGCCGAGATCACCGTGCTGGAGAGCTACCTGCTCAAGCCGAAGAACAAGCCGAGCGACACCGTGCTGGTGTTCATGCACC CGATCGGCGGCGGCGCCTACCTGCCGATGATCAACGCGCTGGCCCGCGCCGGCCACCACGTCATCTACTGCAACAGCCGG TTCCGCGGCACCGACTCGGCCCTGCTGATGGAGAAGGTGGTCGAGGATCTCGGCGAGTGCATCAAGGACGCCAAGAAGCG ACTCGGCTACACCAAGGTAGTGCTGGCCGGATGGAGCGGCGGCGGCTCGCTGTCGGTGTTCTACCAGCAGCAGGCGCAGA ATCCGACCATCACGTCCAGCCCGTCCGGCGACGGCCCGGACCTGACCAAGCTCGACCTGACCCCCGCCGACGGCATCATG CTGCTCGCCGCGCACATCAGCAGGCACGGCACGCTGACCGAGTGGCTGGACGCGTCCATCCTCGACGAATCCGACCCCAC TAAGCGCGATCCCGAGCTGGACCTGTACGACTCCGACAACCCGAACCAACCGCCCTACAGCCAGGAGTTCCTGGACCGCT ACCGGCAGGCCCAGATCGAGCGCAACCGCCGCATCACCGCGTGGGTCAAAGCCAAGCTGGCCGAGTTGAAGGCCGCGGGC CGCCCCGACGACGAATTCGGGTTCGTCGTGCACGGCACCATGGCCGACCCGCGCTGGCTGGACCCGACCGTCGATCCCAA CGAACGCACCCCGGGAACGTGCTACCTGGGGGATCCTCGAGTGGTGAACATGAGCCCCGTCGGGTTGGCGCGGTTCTGCA CGCTGCGCGGCTGGCTGTCGCAGTGGAGCTACGACGACGCCCGCGGCGACGCGCTGGCCTGCGGGCCCGACATCGCCATC CCGGCGCTGGTGATCGGTAACCTGGCCGATGACGCCTGCACCCCCAGCCACACCCGGCGGCTGTTCCAGGCGATCGGACA CCACGACAAGGAGATGCACGAAATCCCGGGCGCCACACACTATTACGCGGGACCGGACCAGCGCGACGCGCTGCGCTCGG CGGTCGGCATCGTCACCGACTGGCTGGTCCGGCACGACTTCGCGGAGAAGGCATGA
Upstream 100 bases:
>100_bases ACGAGTACGCCCGGGTCGACTGGCAGGTGATCGCCGTCGACACCCGCCGCCGGCTGACGCCGTCGGCGGAGGTACTGGCC CACGACCTAGGACAGCACTG
Downstream 100 bases:
>100_bases GCGCTGCGGGTGCGGCCGGACCGCTGGACGGCATCCGGGTGCTCGAGCTGGGCACCCTGATCGCCGGCCCGTTCGCCGGC CGGCTGCTGGGCGACATGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MKHEYDRIPYLVAFQNNSGVRDVYGGLAEITVLESYLLKPKNKPSDTVLVFMHPIGGGAYLPMINALARAGHHVIYCNSR FRGTDSALLMEKVVEDLGECIKDAKKRLGYTKVVLAGWSGGGSLSVFYQQQAQNPTITSSPSGDGPDLTKLDLTPADGIM LLAAHISRHGTLTEWLDASILDESDPTKRDPELDLYDSDNPNQPPYSQEFLDRYRQAQIERNRRITAWVKAKLAELKAAG RPDDEFGFVVHGTMADPRWLDPTVDPNERTPGTCYLGDPRVVNMSPVGLARFCTLRGWLSQWSYDDARGDALACGPDIAI PALVIGNLADDACTPSHTRRLFQAIGHHDKEMHEIPGATHYYAGPDQRDALRSAVGIVTDWLVRHDFAEKA
Sequences:
>Translated_391_residues MKHEYDRIPYLVAFQNNSGVRDVYGGLAEITVLESYLLKPKNKPSDTVLVFMHPIGGGAYLPMINALARAGHHVIYCNSR FRGTDSALLMEKVVEDLGECIKDAKKRLGYTKVVLAGWSGGGSLSVFYQQQAQNPTITSSPSGDGPDLTKLDLTPADGIM LLAAHISRHGTLTEWLDASILDESDPTKRDPELDLYDSDNPNQPPYSQEFLDRYRQAQIERNRRITAWVKAKLAELKAAG RPDDEFGFVVHGTMADPRWLDPTVDPNERTPGTCYLGDPRVVNMSPVGLARFCTLRGWLSQWSYDDARGDALACGPDIAI PALVIGNLADDACTPSHTRRLFQAIGHHDKEMHEIPGATHYYAGPDQRDALRSAVGIVTDWLVRHDFAEKA >Mature_391_residues MKHEYDRIPYLVAFQNNSGVRDVYGGLAEITVLESYLLKPKNKPSDTVLVFMHPIGGGAYLPMINALARAGHHVIYCNSR FRGTDSALLMEKVVEDLGECIKDAKKRLGYTKVVLAGWSGGGSLSVFYQQQAQNPTITSSPSGDGPDLTKLDLTPADGIM LLAAHISRHGTLTEWLDASILDESDPTKRDPELDLYDSDNPNQPPYSQEFLDRYRQAQIERNRRITAWVKAKLAELKAAG RPDDEFGFVVHGTMADPRWLDPTVDPNERTPGTCYLGDPRVVNMSPVGLARFCTLRGWLSQWSYDDARGDALACGPDIAI PALVIGNLADDACTPSHTRRLFQAIGHHDKEMHEIPGATHYYAGPDQRDALRSAVGIVTDWLVRHDFAEKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43256; Mature: 43256
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHEYDRIPYLVAFQNNSGVRDVYGGLAEITVLESYLLKPKNKPSDTVLVFMHPIGGGAY CCCCCCCCCEEEEECCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHH LPMINALARAGHHVIYCNSRFRGTDSALLMEKVVEDLGECIKDAKKRLGYTKVVLAGWSG HHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC GGSLSVFYQQQAQNPTITSSPSGDGPDLTKLDLTPADGIMLLAAHISRHGTLTEWLDASI CCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHH LDESDPTKRDPELDLYDSDNPNQPPYSQEFLDRYRQAQIERNRRITAWVKAKLAELKAAG CCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC RPDDEFGFVVHGTMADPRWLDPTVDPNERTPGTCYLGDPRVVNMSPVGLARFCTLRGWLS CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCHHHHHHHHHHHHH QWSYDDARGDALACGPDIAIPALVIGNLADDACTPSHTRRLFQAIGHHDKEMHEIPGATH HCCCCCCCCCEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCE YYAGPDQRDALRSAVGIVTDWLVRHDFAEKA ECCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKHEYDRIPYLVAFQNNSGVRDVYGGLAEITVLESYLLKPKNKPSDTVLVFMHPIGGGAY CCCCCCCCCEEEEECCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHH LPMINALARAGHHVIYCNSRFRGTDSALLMEKVVEDLGECIKDAKKRLGYTKVVLAGWSG HHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC GGSLSVFYQQQAQNPTITSSPSGDGPDLTKLDLTPADGIMLLAAHISRHGTLTEWLDASI CCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHH LDESDPTKRDPELDLYDSDNPNQPPYSQEFLDRYRQAQIERNRRITAWVKAKLAELKAAG CCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC RPDDEFGFVVHGTMADPRWLDPTVDPNERTPGTCYLGDPRVVNMSPVGLARFCTLRGWLS CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCHHHHHHHHHHHHH QWSYDDARGDALACGPDIAIPALVIGNLADDACTPSHTRRLFQAIGHHDKEMHEIPGATH HCCCCCCCCCEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCE YYAGPDQRDALRSAVGIVTDWLVRHDFAEKA ECCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA