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The map label for this gene is norB [H]

Identifier: 41409279

GI number: 41409279

Start: 3530957

End: 3532612

Strand: Direct

Name: norB [H]

Synonym: MAP3181

Alternate gene names: 41409279

Gene position: 3530957-3532612 (Clockwise)

Preceding gene: 41409278

Following gene: 41409280

Centisome position: 73.11

GC content: 67.03

Gene sequence:

>1656_bases
GTGATCGTCTGGTCGGCGCTGTCGCTGGTGGCGCTGCTGGGCGGCATCGGGGTGATGTTCGCGGTGTACGGGCGGTGGAG
CCAGAAGGTGGGCTGGCACAGCGCCGAGACGTCCACCCTGTCCTTCCGCCAGCCCGGCGACGTGGGCCTGACGCCGGCCC
AACGCGCCTGCGTCTGGTTCTTTGCGATCGTGTCGGTGCTGTTTTTGGCCCAAACGCTGCTGGGCGCGGCGGCCGAGCAC
TACCGGGCCGACCTGTCCAACTTCTTCGGCCTGGATCTGGCCCGGGTGCTGCCCTACAACCTGGCCCGCACCTGGCATCT
GCAGCTGTCGCTGTTCTGGACCGCGGCCGCCTTCCTGGCCGGCGGCATCTTCCTGGTGCCCTTCATCGCGCGCCGCGAGC
CCAAGCGCCAGGCGCTGCTGGCCTACATCCTGCTGGGGGCGGTCGCGGTGGTGGTGTTCGGCTCGCTGATCTGTGAGGCG
CTGTCCATCTACGGTGTCATCCCGGCCGGCGGGCTGTTCTCCCAGCAGTGGGAGTACCTCGACCTGCCGCGGCTGTGGCA
GATCCTGCTGATCGCCGGCATGTTCATGTGGATCGCCATCATCTGGCGCGGCATCCGCGGCCGGCTCAAGGGCGAGTCGA
AGATGAACATGCCGTGGCTGTTCTTCTTCTCCGGGCTGGCCATCCCGGCCTTCTACACGGTGGGCCTGCTGGCCGGCAGC
GACGCCCACTACACCGTGGCCGACTTCTGGCGGTTCTGGGTGGTGCACCTGTGGGTGGAGGACTTCCTCGAGCTGTTCAC
CACCGTGATGGTGGCCTACATGTTCGTTCTGCTCGGCGTGGTGCGCGAGAAGATCGCGCTGGGCGTGATCTTCCTCGACG
TCATCCTGTATTCCGCCGGAGGCGTCATCGGCACCATGCACCACCTGTACTTCTCCGGCACCCCGGTGGAACACATGGCG
CTGGGCGCGTTCTTCTCGGCCGCCGAGGTCATTCCGCTGACCTTCCTGACGGTCGAGGCGTGGGCGTTCCTGCAACTCGG
CGCGCGCCAGCAGTCCGGCGACGCCAACCCGTTCCCGCACCGCTGGGCGGTCATGTTCCTGGTCGCGGTCGGCTTCTGGA
ACTTCTTGGGGGCGGGCATCTTCGGCTTCCTGATCAATCTTCCGGTGGTGTCCTACTACCAGATCGGCACCGCCCTGACC
GCCAACCACGGGCACGCGGCCATGATGGGCGTGTACGGCATGCTCGCCGTCGGCCTGGCCATGTTCGCCTTCCGCTACGT
GATCCCGGCCGACAAGTGGCCGGAGAAGCTGGCGCGAATCTCGTTCTGGTGCATGAACATCGGGCTGGCGTGGATGGTGT
TCGCCACGCTGCTGCCGTTGGGCGTGCTGCAGCTCTACCACTCGGTCAACGACGGCTACTTCGAGGCCCGCTCGCTGGGC
TACATCACCAAGCCCGGCAACGCGGTCCTGGAATGGCTCCGGCTGCCCGGTGATGTCATCCTGATCGCCGGCGGCGTGCT
GCCGTTCGTCTGGATCGCCTGGACCGCGCTGCGTAACTTCCGGTCCGGCACCACGGTTCAGGAGCTGCCCGAGCACCCGC
TTTACACCGAGTCCCCGGTCATGTCCGAGGCCGGCGCCGCTGCGGCGAAGGATTGA

Upstream 100 bases:

>100_bases
GACGGCGTGGGCCGCGGCGGCCGAACGGCCCGGCCACAAGTACACCTACACCAACAACTGGCCCGCCGAGCCGCGAGTCG
ACAACGGGCCCACGGCAGCG

Downstream 100 bases:

>100_bases
CCGGTGGGTGCACCGGCCACCACGGTCTGGTTGATCGCCGGGTATTCGCTGGCCTTGCTGGTCGTCGGCTGGGGGTTCGA
CGTCATGGCGCGCCGGGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NOR large subunit; Nitric oxide reductase cytochrome b subunit [H]

Number of amino acids: Translated: 551; Mature: 551

Protein sequence:

>551_residues
MIVWSALSLVALLGGIGVMFAVYGRWSQKVGWHSAETSTLSFRQPGDVGLTPAQRACVWFFAIVSVLFLAQTLLGAAAEH
YRADLSNFFGLDLARVLPYNLARTWHLQLSLFWTAAAFLAGGIFLVPFIARREPKRQALLAYILLGAVAVVVFGSLICEA
LSIYGVIPAGGLFSQQWEYLDLPRLWQILLIAGMFMWIAIIWRGIRGRLKGESKMNMPWLFFFSGLAIPAFYTVGLLAGS
DAHYTVADFWRFWVVHLWVEDFLELFTTVMVAYMFVLLGVVREKIALGVIFLDVILYSAGGVIGTMHHLYFSGTPVEHMA
LGAFFSAAEVIPLTFLTVEAWAFLQLGARQQSGDANPFPHRWAVMFLVAVGFWNFLGAGIFGFLINLPVVSYYQIGTALT
ANHGHAAMMGVYGMLAVGLAMFAFRYVIPADKWPEKLARISFWCMNIGLAWMVFATLLPLGVLQLYHSVNDGYFEARSLG
YITKPGNAVLEWLRLPGDVILIAGGVLPFVWIAWTALRNFRSGTTVQELPEHPLYTESPVMSEAGAAAAKD

Sequences:

>Translated_551_residues
MIVWSALSLVALLGGIGVMFAVYGRWSQKVGWHSAETSTLSFRQPGDVGLTPAQRACVWFFAIVSVLFLAQTLLGAAAEH
YRADLSNFFGLDLARVLPYNLARTWHLQLSLFWTAAAFLAGGIFLVPFIARREPKRQALLAYILLGAVAVVVFGSLICEA
LSIYGVIPAGGLFSQQWEYLDLPRLWQILLIAGMFMWIAIIWRGIRGRLKGESKMNMPWLFFFSGLAIPAFYTVGLLAGS
DAHYTVADFWRFWVVHLWVEDFLELFTTVMVAYMFVLLGVVREKIALGVIFLDVILYSAGGVIGTMHHLYFSGTPVEHMA
LGAFFSAAEVIPLTFLTVEAWAFLQLGARQQSGDANPFPHRWAVMFLVAVGFWNFLGAGIFGFLINLPVVSYYQIGTALT
ANHGHAAMMGVYGMLAVGLAMFAFRYVIPADKWPEKLARISFWCMNIGLAWMVFATLLPLGVLQLYHSVNDGYFEARSLG
YITKPGNAVLEWLRLPGDVILIAGGVLPFVWIAWTALRNFRSGTTVQELPEHPLYTESPVMSEAGAAAAKD
>Mature_551_residues
MIVWSALSLVALLGGIGVMFAVYGRWSQKVGWHSAETSTLSFRQPGDVGLTPAQRACVWFFAIVSVLFLAQTLLGAAAEH
YRADLSNFFGLDLARVLPYNLARTWHLQLSLFWTAAAFLAGGIFLVPFIARREPKRQALLAYILLGAVAVVVFGSLICEA
LSIYGVIPAGGLFSQQWEYLDLPRLWQILLIAGMFMWIAIIWRGIRGRLKGESKMNMPWLFFFSGLAIPAFYTVGLLAGS
DAHYTVADFWRFWVVHLWVEDFLELFTTVMVAYMFVLLGVVREKIALGVIFLDVILYSAGGVIGTMHHLYFSGTPVEHMA
LGAFFSAAEVIPLTFLTVEAWAFLQLGARQQSGDANPFPHRWAVMFLVAVGFWNFLGAGIFGFLINLPVVSYYQIGTALT
ANHGHAAMMGVYGMLAVGLAMFAFRYVIPADKWPEKLARISFWCMNIGLAWMVFATLLPLGVLQLYHSVNDGYFEARSLG
YITKPGNAVLEWLRLPGDVILIAGGVLPFVWIAWTALRNFRSGTTVQELPEHPLYTESPVMSEAGAAAAKD

Specific function: Component of the anaerobic respiratory chain that transforms nitrate to dinitrogen (denitrification). NorB is the catalytic subunit of the enzyme complex. Shows proton pump activity across the membrane in denitrifying bacterial cells. The mononitrogen red

COG id: COG3256

COG function: function code P; Nitric oxide reductase large subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.7.99.7 [H]

Molecular weight: Translated: 61043; Mature: 61043

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCCCCCCC
>Mature Secondary Structure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HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7711073; 10984043 [H]