| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409278
Identifier: 41409278
GI number: 41409278
Start: 3530286
End: 3530810
Strand: Direct
Name: 41409278
Synonym: MAP3180
Alternate gene names: NA
Gene position: 3530286-3530810 (Clockwise)
Preceding gene: 41409275
Following gene: 41409279
Centisome position: 73.09
GC content: 66.1
Gene sequence:
>525_bases ATGACCGCTCCCGAGACCTCCGCTCAACAGACGTCGTCGCAGCCGCTGGTTTCAAGGGGCTGGATCCAAGGTGTCGCCCT GGTCATGATTTTCGGCTTCCTGGTGATGGGCATCCTGGCCTATCGCACCTACTCGGCGTCGATGCCGATGCCGGACAAGG TGGTCAGCGAGTCCGGGCGGCTGCTGTTCACCGGCGCGGACATCACCCGCGGCCAGGAGCTTTACCAGGCACGCGGGCTG ATGGAATACGGGTCGGTGCTGGGCCACGGCGCCTACCTGGGGCCCGACTACACCGCCGAATATCTGCGGACGGCAACGCA GGATGTCGCCGACCAACTGCGGGCGCAGGGCGTCGCCGACCCGCGCGAGCGGGTGGTCACCGAGTTCCGCACCAACCGCT ATCACCCCGACACCAAGACGCTGGTGTTCACCGACCGGCAGGCCGCGGCGTTCGACCACATCCAGGATCGCTACGGCGCC TACTTCGGTGAGAACTCGACGAAATACGGCTGCTGCCGCACCTGA
Upstream 100 bases:
>100_bases ATCGCACCACCGGCCATCGAATATTGGTTGCGGACGTAACCAGGTTCGATATGCGAGACAGCGACACCACCGCGGCCCCT AGACGAAAGAGACCTCGCGC
Downstream 100 bases:
>100_bases TCACCGACAAGGCGCAAATCCGCGACCTGACGGCGTTCTTCGCCTGGACGGCGTGGGCCGCGGCGGCCGAACGGCCCGGC CACAAGTACACCTACACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Nitric-Oxide Reductase; Nitric Oxide Reductase Large Subunit; Nitric Oxide Reductase Cytochrome B Subunit; Nitric-Oxide Reductase Subunit B; Cytochrome B Subunit Of Nitric Oxide Reductase; Nitric Oxide Reductase Subunit B; Nitric Oxide Reductase Large Subunit-Like Protein; Nitric Oxide Reductase QNor Type; Nitric Oxide Reductase NorZ; Nitric Oxide Reductase Transmembrane Protein; Nitric Oxide Reductase NorB; Nitric Oxide Reductase NorZ Apoprotein; Nitric-Oxide Reductase Large Subunit; NorB Protein; Nitric Oxide Reductase NorB/NorZ-Like; Nitric Oxide Reductase Protein; Cytochrome C Oxidase Subunit I
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MTAPETSAQQTSSQPLVSRGWIQGVALVMIFGFLVMGILAYRTYSASMPMPDKVVSESGRLLFTGADITRGQELYQARGL MEYGSVLGHGAYLGPDYTAEYLRTATQDVADQLRAQGVADPRERVVTEFRTNRYHPDTKTLVFTDRQAAAFDHIQDRYGA YFGENSTKYGCCRT
Sequences:
>Translated_174_residues MTAPETSAQQTSSQPLVSRGWIQGVALVMIFGFLVMGILAYRTYSASMPMPDKVVSESGRLLFTGADITRGQELYQARGL MEYGSVLGHGAYLGPDYTAEYLRTATQDVADQLRAQGVADPRERVVTEFRTNRYHPDTKTLVFTDRQAAAFDHIQDRYGA YFGENSTKYGCCRT >Mature_173_residues TAPETSAQQTSSQPLVSRGWIQGVALVMIFGFLVMGILAYRTYSASMPMPDKVVSESGRLLFTGADITRGQELYQARGLM EYGSVLGHGAYLGPDYTAEYLRTATQDVADQLRAQGVADPRERVVTEFRTNRYHPDTKTLVFTDRQAAAFDHIQDRYGAY FGENSTKYGCCRT
Specific function: Unknown
COG id: COG3256
COG function: function code P; Nitric oxide reductase large subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19343; Mature: 19212
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPETSAQQTSSQPLVSRGWIQGVALVMIFGFLVMGILAYRTYSASMPMPDKVVSESGR CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC LLFTGADITRGQELYQARGLMEYGSVLGHGAYLGPDYTAEYLRTATQDVADQLRAQGVAD EEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC PRERVVTEFRTNRYHPDTKTLVFTDRQAAAFDHIQDRYGAYFGENSTKYGCCRT HHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TAPETSAQQTSSQPLVSRGWIQGVALVMIFGFLVMGILAYRTYSASMPMPDKVVSESGR CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC LLFTGADITRGQELYQARGLMEYGSVLGHGAYLGPDYTAEYLRTATQDVADQLRAQGVAD EEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC PRERVVTEFRTNRYHPDTKTLVFTDRQAAAFDHIQDRYGAYFGENSTKYGCCRT HHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA