| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is yfeW [C]
Identifier: 41409259
GI number: 41409259
Start: 3514097
End: 3514861
Strand: Reverse
Name: yfeW [C]
Synonym: MAP3161c
Alternate gene names: 41409259
Gene position: 3514861-3514097 (Counterclockwise)
Preceding gene: 41409260
Following gene: 41409256
Centisome position: 72.77
GC content: 68.89
Gene sequence:
>765_bases GTGCAGCACCACGTGTTCGGGCCGCTCGACATGCACGACACCCGGTATCTTCCGCCGGCCAAGGCGTGCGGCCCGCATAT CATCCGGGGAGCCGCGATCGCCTGGGCGCCGAACGGCGAGCCGACGACGGAGTGCCCCGAATGGACTTGGCGCACAACAC TTTTGCCGCGCATCGCGCCGACTGCACGTGACGAGGAAAGCAGGGACGACCCGAGCAAGAACCCGGATTACTATGCCCTG CTGCGGGGTACGGTGCACGACCCGACGGCCCGCCGGATGGGCGGCGTGGCCGGCAACGCCGGCGTGTTCTCCACGGCGCA CGACGTCGGCGTCTATGCGCAGGCCCTGCTGGATCGGCTGGCCGGGCGCCCGAGTGACTTTCCACTGCAGCAGGGCACTG TCGAGCTGATGACGACCCCGCAGCAACCGGGCCATGACCCCCGACAACTGGAAGCGGCCAACCGTGCCGCCCGGTCAGGC ACGCCGAACTATCCGGCGATCAAGGGGCAGAACCTGTTCGGGTTCGGCTGGGACATCGACACCGGCTACTCCAGGCCGCG GGGACGCGTCTTTCCCATCGGCAGCTTCGGCAACACCGGATTCACCGGAACCACGCTGTGGATGGACCCGGGCTCGGACA CCTACGTGATCCTGCTGTCCAACTCGATCCACCTGCGGGGCAGCCCGCCGATCTCGAATCTGCGCGGTGACGTGGCCACC GCCGCCGCCCGGGCCCTACACCTTTACGGCGCCGCCCCGCCGTAG
Upstream 100 bases:
>100_bases GCAGTCGGCACCCGCCGGGGAGTTCCGCTACTCCGACATCAATTACCTGCTGCTCGGCGCGCTGCTCGAGAAGATCACCG GCGAGGACGAGGACGACTAC
Downstream 100 bases:
>100_bases CGCTGAAGACCCAAAAGCTATGCGTCCGGCTCCATTTCAAGCAGCCGCAATGGATGCAGGCCGTCGACCGCGCCGACGAA CGGCGGGTGGATGCTGTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-Lactamase Superfamily Metal-Dependent Hydrolase; Esterase
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MQHHVFGPLDMHDTRYLPPAKACGPHIIRGAAIAWAPNGEPTTECPEWTWRTTLLPRIAPTARDEESRDDPSKNPDYYAL LRGTVHDPTARRMGGVAGNAGVFSTAHDVGVYAQALLDRLAGRPSDFPLQQGTVELMTTPQQPGHDPRQLEAANRAARSG TPNYPAIKGQNLFGFGWDIDTGYSRPRGRVFPIGSFGNTGFTGTTLWMDPGSDTYVILLSNSIHLRGSPPISNLRGDVAT AAARALHLYGAAPP
Sequences:
>Translated_254_residues MQHHVFGPLDMHDTRYLPPAKACGPHIIRGAAIAWAPNGEPTTECPEWTWRTTLLPRIAPTARDEESRDDPSKNPDYYAL LRGTVHDPTARRMGGVAGNAGVFSTAHDVGVYAQALLDRLAGRPSDFPLQQGTVELMTTPQQPGHDPRQLEAANRAARSG TPNYPAIKGQNLFGFGWDIDTGYSRPRGRVFPIGSFGNTGFTGTTLWMDPGSDTYVILLSNSIHLRGSPPISNLRGDVAT AAARALHLYGAAPP >Mature_254_residues MQHHVFGPLDMHDTRYLPPAKACGPHIIRGAAIAWAPNGEPTTECPEWTWRTTLLPRIAPTARDEESRDDPSKNPDYYAL LRGTVHDPTARRMGGVAGNAGVFSTAHDVGVYAQALLDRLAGRPSDFPLQQGTVELMTTPQQPGHDPRQLEAANRAARSG TPNYPAIKGQNLFGFGWDIDTGYSRPRGRVFPIGSFGNTGFTGTTLWMDPGSDTYVILLSNSIHLRGSPPISNLRGDVAT AAARALHLYGAAPP
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27444; Mature: 27444
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHHVFGPLDMHDTRYLPPAKACGPHIIRGAAIAWAPNGEPTTECPEWTWRTTLLPRIAP CCCCCCCCCCCCCCCCCCCHHHCCCCEECCCEEEECCCCCCCCCCCCCEEHHECCCCCCC TARDEESRDDPSKNPDYYALLRGTVHDPTARRMGGVAGNAGVFSTAHDVGVYAQALLDRL CCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH AGRPSDFPLQQGTVELMTTPQQPGHDPRQLEAANRAARSGTPNYPAIKGQNLFGFGWDID CCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCC TGYSRPRGRVFPIGSFGNTGFTGTTLWMDPGSDTYVILLSNSIHLRGSPPISNLRGDVAT CCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCEEEEEEECCEEECCCCCHHHHCCHHHH AAARALHLYGAAPP HHHHHHHEECCCCC >Mature Secondary Structure MQHHVFGPLDMHDTRYLPPAKACGPHIIRGAAIAWAPNGEPTTECPEWTWRTTLLPRIAP CCCCCCCCCCCCCCCCCCCHHHCCCCEECCCEEEECCCCCCCCCCCCCEEHHECCCCCCC TARDEESRDDPSKNPDYYALLRGTVHDPTARRMGGVAGNAGVFSTAHDVGVYAQALLDRL CCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH AGRPSDFPLQQGTVELMTTPQQPGHDPRQLEAANRAARSGTPNYPAIKGQNLFGFGWDID CCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCC TGYSRPRGRVFPIGSFGNTGFTGTTLWMDPGSDTYVILLSNSIHLRGSPPISNLRGDVAT CCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCEEEEEEECCEEECCCCCHHHHCCHHHH AAARALHLYGAAPP HHHHHHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA