| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409256
Identifier: 41409256
GI number: 41409256
Start: 3511289
End: 3511684
Strand: Reverse
Name: 41409256
Synonym: MAP3158c
Alternate gene names: NA
Gene position: 3511684-3511289 (Counterclockwise)
Preceding gene: 41409259
Following gene: 41409254
Centisome position: 72.71
GC content: 69.7
Gene sequence:
>396_bases GTGTACCACACCCGAGCCGGGGGCCGGGATGCGTCGGCGGCCCGTCTGTACGAGGATGAAGCGATGCGAATGCTTGCGCT GCTCGCCGGCTTCGCCGCGCTGGCCGGGATGGCCGCGCCGGCGCACGCCGATCCGGCCGGCACCACGGGATCCGACGCCA GCTTCCTGGCCGCGCTCAACCAGGCCGGCATCACCTACCAGAACCCGGCGACCGCCATTGAAGTGGGCAAACGGGCGTGC GAGCTGATGGACCAGGGCAGCCCTCAGGTCGAGGTCATCAAGAACGTGTCGTCGAGCAATCCGGGGTTCACGGTGGACGG CGCCGCTCAGTTCACCATGATCGCGGCCAGTGCCTACTGTCCCCAGCATCTGGGGCAGCGGGTCGGGCCGGGCTAG
Upstream 100 bases:
>100_bases GCCGGAAGTAGTCGGCCGCGTCGATGATGGCGGCGAACCGATCGGCGCGCGCCGTGCGCCAGCACGTCTGGCCGGGGGTC AGCAGCGCGGGCATACGACT
Downstream 100 bases:
>100_bases CTACCGGCGCTCACACCGATTGGAAGCTGCGCTCGACCTCGGCGCGGCTGCGCACCTGGTCGGTGCCCAGCACGTAGCTC GGCACCGTGTGCGGGACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MYHTRAGGRDASAARLYEDEAMRMLALLAGFAALAGMAAPAHADPAGTTGSDASFLAALNQAGITYQNPATAIEVGKRAC ELMDQGSPQVEVIKNVSSSNPGFTVDGAAQFTMIAASAYCPQHLGQRVGPG
Sequences:
>Translated_131_residues MYHTRAGGRDASAARLYEDEAMRMLALLAGFAALAGMAAPAHADPAGTTGSDASFLAALNQAGITYQNPATAIEVGKRAC ELMDQGSPQVEVIKNVSSSNPGFTVDGAAQFTMIAASAYCPQHLGQRVGPG >Mature_131_residues MYHTRAGGRDASAARLYEDEAMRMLALLAGFAALAGMAAPAHADPAGTTGSDASFLAALNQAGITYQNPATAIEVGKRAC ELMDQGSPQVEVIKNVSSSNPGFTVDGAAQFTMIAASAYCPQHLGQRVGPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13415; Mature: 13415
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYHTRAGGRDASAARLYEDEAMRMLALLAGFAALAGMAAPAHADPAGTTGSDASFLAALN CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH QAGITYQNPATAIEVGKRACELMDQGSPQVEVIKNVSSSNPGFTVDGAAQFTMIAASAYC HCCCEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHC PQHLGQRVGPG HHHHHHCCCCC >Mature Secondary Structure MYHTRAGGRDASAARLYEDEAMRMLALLAGFAALAGMAAPAHADPAGTTGSDASFLAALN CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH QAGITYQNPATAIEVGKRACELMDQGSPQVEVIKNVSSSNPGFTVDGAAQFTMIAASAYC HCCCEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHC PQHLGQRVGPG HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA