Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409255

Identifier: 41409255

GI number: 41409255

Start: 3510274

End: 3511278

Strand: Direct

Name: 41409255

Synonym: MAP3157

Alternate gene names: NA

Gene position: 3510274-3511278 (Clockwise)

Preceding gene: 41409252

Following gene: 41409257

Centisome position: 72.68

GC content: 66.97

Gene sequence:

>1005_bases
GTGTTCCTGCCACACCAGATCATCGGGCAGCTGATCAACAAGCAGTTGGACGACAACATGCGGCGGTATTTCTTCCGCGG
CATGGAGTTCGCGGCGCCCGTCGGCGATCCGGGCTGGTTCGGTCCGGACAGCGCCGTGTGGCGGGTGCATTCGCACCTGC
CGGCCTTGATCTTCGGCCTGCAGTGTGCGGCCTTCATGGAAACCCTCGACCCGTCGATCTACTGGATGGGCATGCATCAC
TCGCGACTGATCAAGCGGGACAGCAATGGCAACCCGGTGTCCCACGTGCCGGTCATCGATCCCGAGGGTGCGGCGACCCG
GCTGGGCCACTCGGTGGCGTTCTTCATCGGCACCGCCTACGGGTCGCCCGAAACCGCCGAACGGCTGGCGAAATCCGTGC
GGGCGATGCACCACACCATCAAGGGCACTCGCCCGGACGGGGCCCGCTACGACGCCGACGATCCCGAATGGCTGCGCTGG
AACTACGCGACGGTCGTCTGGGGCATCGCCACCGCGCACGAGCTGTATCACCCAATGCCGTTGCGCGGCAAGGCACTCGA
CCGCTATTACGGCGAGTTCGTCCGCGTCGGGCACGCGCTGGGAGGCACCGATCTGCCCGCCACCAAGGCCGAGACACTCG
AGTGCCTGGAATCCTACTTGCCGAAACTGGCTGTCACGCATGGCAAAGCGATGGGCACGGGCCCCAACGTGGCCATGCCG
CAGGCCGCCGTCGACTGGGCCATCCGCGACACCATGCCGAAATGGGCCAAGCAGATGTTGCAGCACCGCGACTGCAACAT
CATCGAGCGCACCGCCCGTCGCAGTGCGGTGTGGGCGATCATCAACGGCATCCATGCCGCGTCGGGCCCGGCCCCGGAGT
TCCGGCAGGCTCAAGCCCGGGTCAGGGGTGGCACCACCGTCCCGCACACGGTGCCGAGCTACGTGCTGGGCACCGACCAG
GTGCGCAGCCGCGCCGAGGTCGAGCGCAGCTTCCAATCGGTGTGA

Upstream 100 bases:

>100_bases
CATCCCTACAGCCTAAGTCGACATCGCCCCGGTCTTGTCACACCTGTAACCAGAAACATATTCTGGTCACGGCCGTGACC
AAAGTTTGAGGGAGTGCGCT

Downstream 100 bases:

>100_bases
GCGCCGGTAGCTAGCCCGGCCCGACCCGCTGCCCCAGATGCTGGGGACAGTAGGCACTGGCCGCGATCATGGTGAACTGA
GCGGCGCCGTCCACCGTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MFLPHQIIGQLINKQLDDNMRRYFFRGMEFAAPVGDPGWFGPDSAVWRVHSHLPALIFGLQCAAFMETLDPSIYWMGMHH
SRLIKRDSNGNPVSHVPVIDPEGAATRLGHSVAFFIGTAYGSPETAERLAKSVRAMHHTIKGTRPDGARYDADDPEWLRW
NYATVVWGIATAHELYHPMPLRGKALDRYYGEFVRVGHALGGTDLPATKAETLECLESYLPKLAVTHGKAMGTGPNVAMP
QAAVDWAIRDTMPKWAKQMLQHRDCNIIERTARRSAVWAIINGIHAASGPAPEFRQAQARVRGGTTVPHTVPSYVLGTDQ
VRSRAEVERSFQSV

Sequences:

>Translated_334_residues
MFLPHQIIGQLINKQLDDNMRRYFFRGMEFAAPVGDPGWFGPDSAVWRVHSHLPALIFGLQCAAFMETLDPSIYWMGMHH
SRLIKRDSNGNPVSHVPVIDPEGAATRLGHSVAFFIGTAYGSPETAERLAKSVRAMHHTIKGTRPDGARYDADDPEWLRW
NYATVVWGIATAHELYHPMPLRGKALDRYYGEFVRVGHALGGTDLPATKAETLECLESYLPKLAVTHGKAMGTGPNVAMP
QAAVDWAIRDTMPKWAKQMLQHRDCNIIERTARRSAVWAIINGIHAASGPAPEFRQAQARVRGGTTVPHTVPSYVLGTDQ
VRSRAEVERSFQSV
>Mature_334_residues
MFLPHQIIGQLINKQLDDNMRRYFFRGMEFAAPVGDPGWFGPDSAVWRVHSHLPALIFGLQCAAFMETLDPSIYWMGMHH
SRLIKRDSNGNPVSHVPVIDPEGAATRLGHSVAFFIGTAYGSPETAERLAKSVRAMHHTIKGTRPDGARYDADDPEWLRW
NYATVVWGIATAHELYHPMPLRGKALDRYYGEFVRVGHALGGTDLPATKAETLECLESYLPKLAVTHGKAMGTGPNVAMP
QAAVDWAIRDTMPKWAKQMLQHRDCNIIERTARRSAVWAIINGIHAASGPAPEFRQAQARVRGGTTVPHTVPSYVLGTDQ
VRSRAEVERSFQSV

Specific function: Unknown

COG id: COG3662

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37155; Mature: 37155

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLPHQIIGQLINKQLDDNMRRYFFRGMEFAAPVGDPGWFGPDSAVWRVHSHLPALIFGL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QCAAFMETLDPSIYWMGMHHSRLIKRDSNGNPVSHVPVIDPEGAATRLGHSVAFFIGTAY
HHHHHHHHCCCCEEEEECHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCHHEEEEEECC
GSPETAERLAKSVRAMHHTIKGTRPDGARYDADDPEWLRWNYATVVWGIATAHELYHPMP
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCC
LRGKALDRYYGEFVRVGHALGGTDLPATKAETLECLESYLPKLAVTHGKAMGTGPNVAMP
CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
QAAVDWAIRDTMPKWAKQMLQHRDCNIIERTARRSAVWAIINGIHAASGPAPEFRQAQAR
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
VRGGTTVPHTVPSYVLGTDQVRSRAEVERSFQSV
HCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFLPHQIIGQLINKQLDDNMRRYFFRGMEFAAPVGDPGWFGPDSAVWRVHSHLPALIFGL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QCAAFMETLDPSIYWMGMHHSRLIKRDSNGNPVSHVPVIDPEGAATRLGHSVAFFIGTAY
HHHHHHHHCCCCEEEEECHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCHHEEEEEECC
GSPETAERLAKSVRAMHHTIKGTRPDGARYDADDPEWLRWNYATVVWGIATAHELYHPMP
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCC
LRGKALDRYYGEFVRVGHALGGTDLPATKAETLECLESYLPKLAVTHGKAMGTGPNVAMP
CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
QAAVDWAIRDTMPKWAKQMLQHRDCNIIERTARRSAVWAIINGIHAASGPAPEFRQAQAR
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
VRGGTTVPHTVPSYVLGTDQVRSRAEVERSFQSV
HCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA