Click here to switch to the map view.

The map label for this gene is 41409257

Identifier: 41409257

GI number: 41409257

Start: 3511676

End: 3513136

Strand: Direct

Name: 41409257

Synonym: MAP3159

Alternate gene names: NA

Gene position: 3511676-3513136 (Clockwise)

Preceding gene: 41409255

Following gene: 41409258

Centisome position: 72.71

GC content: 68.72

Gene sequence:

>1461_bases
GTGGTACACAGTCGTATGCCCGCGCTGCTGACCCCCGGCCAGACGTGCTGGCGCACGGCGCGCGCCGATCGGTTCGCCGC
CATCATCGACGCGGCCGACTACTTCCGGCACGTCAAGGCGGCGATGCTGCGCGCCCGCCATCGAATCATGCTGGTCGGCT
GGGACTTCGACTCCCGCGTGACCTTCGAACGCGGCGACAAGACACTGCCCGGCCCAAACCAGTTGGGCGCCTTCCTTTTC
TGGATGGTGCGCAAACGCCCGGCCCTGCAGATCCACCTGCTGAAGTCCAACCTGCGCCTGCTTCCGGCACTTGACGGCCT
GTGGTTCGGGCTCACCCCGGTGTCGCTGCTGAACCAGATCAGCAGCAGGCGAATGCACTTCGCCATCGACGGCGCCCACC
CGGTCGGCTCGGTGCATCATCAGAAGATCGTCGTCGTCGACGACGCGGTGGCGTTCTGCGGCGGTATCGATCTGACCCTC
GACCGGTGGGACACCCGCGCGCACGAGCACACCAGCCGGCGCCGCCGCACAGCCGGGCGCGGCTACGGGCCGCGGCACGA
CGTCGGGGTGGCGGTCGACGGCGCGGCGGCACGGGCCCTCGGCGAGCAAGCCCGCACCCGGTGGCAGACCGCCACCAAGC
AATCGCTGTCACCGGTCACCGCCAAACACAGCGCGTGGCCCAGCAAGCTGCGGCCGACCCTGCGCAACGTCGACGTCGGA
ATCGCGCTCACGCTGCCGGATCTCGACGATCGGCCCGAGGTGCGCCAGGTCGAGGCGCTCAACCTGGCCGCCATCGCGGC
AGCCCGCGACACCATCTATGTGGAAAACCAATACCTGGCGTCGCGAACCATTGCCCAGGCACTGGCGCAGCGGCTGCGCG
AGGAACACGGCCCGCAGATCGTCATCGTGCTCGCGCGCAAAGGCAACAACCCGCTGGAACGCGGAACCATGGACAGCGCG
CGCCACCGCCTGATCCGACTGCTGTGGGACGCCGACGAGCACCATCGCCTCGGTGTCTACTGGCCGGTGACCGACGGCGG
TGCGCCGATCTACATCCACTCGAAGGTGCTGGCGGTCGACGATCGGCTGTTGCGCATCGGCTCGTCGAATTTCAACAACC
GGTCGATGGGGTTCGACAGCGAATGCGACGTGGCCATCGAGGCGCGCGGCTCGCAGCACGACGACGTGCGGCGCGAAATC
ACCTCGGTGCGAAACGAATTGGTGGCCGAGCATCTCGGTGTACCGGTCGCCACCCTGCAAGAGGCGATCGCCGATCGCGG
GTCGCTGCTGGCCGCGGTCGAGGAACTTCGCGGCGACGGCAAGACATTGCGGCCGTTCACCGAGCGCACCGTGGCCAACG
AGGCCGGCCCGCTGGCCGAAAACGAGCTGATGGACCCCGACCACGTTCCCCGGTCGCTGACGCGCAGCGTGCAGCGGCTC
ATCACCGGCCGGCGGGGCTGA

Upstream 100 bases:

>100_bases
TCCCGGCCAGCGCGGCGAAGCCGGCGAGCAGCGCAAGCATTCGCATCGCTTCATCCTCGTACAGACGGGCCGCCGACGCA
TCCCGGCCCCCGGCTCGGGT

Downstream 100 bases:

>100_bases
CCCGCGGCGATTCGGGTGGGGGTCGGGCCGAACCCGGCCTACTGTGGACAGCAGCGCCGGCGGACTAAGGACGAGCAACA
TGAGCATCGACGACGAATCC

Product: hypothetical protein

Products: NA

Alternate protein names: Phospholipase D; SNARE Associated Golgi Protein; SNARE Associated Golgi Protein-Related Protein; Phospholipase D Family Protein; Phospholipase D Domain Protein; SNARE Associated Golgi Protein-Like Protein; Transmembrane Phospholipase Protein; SNARE Associated Golgi Protein-Associated Protein; Phospholipase/Transphosphatidylase; Phospholipase D Alpha; Phospholipase D Active Site Motif Domain Protein; Phospholipase; Phospholipase Protein; Phospholipase D Protein; Phospholipase/Phosphatidylserine Synthase; Phospholipase D Superfamily Protein

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MVHSRMPALLTPGQTCWRTARADRFAAIIDAADYFRHVKAAMLRARHRIMLVGWDFDSRVTFERGDKTLPGPNQLGAFLF
WMVRKRPALQIHLLKSNLRLLPALDGLWFGLTPVSLLNQISSRRMHFAIDGAHPVGSVHHQKIVVVDDAVAFCGGIDLTL
DRWDTRAHEHTSRRRRTAGRGYGPRHDVGVAVDGAAARALGEQARTRWQTATKQSLSPVTAKHSAWPSKLRPTLRNVDVG
IALTLPDLDDRPEVRQVEALNLAAIAAARDTIYVENQYLASRTIAQALAQRLREEHGPQIVIVLARKGNNPLERGTMDSA
RHRLIRLLWDADEHHRLGVYWPVTDGGAPIYIHSKVLAVDDRLLRIGSSNFNNRSMGFDSECDVAIEARGSQHDDVRREI
TSVRNELVAEHLGVPVATLQEAIADRGSLLAAVEELRGDGKTLRPFTERTVANEAGPLAENELMDPDHVPRSLTRSVQRL
ITGRRG

Sequences:

>Translated_486_residues
MVHSRMPALLTPGQTCWRTARADRFAAIIDAADYFRHVKAAMLRARHRIMLVGWDFDSRVTFERGDKTLPGPNQLGAFLF
WMVRKRPALQIHLLKSNLRLLPALDGLWFGLTPVSLLNQISSRRMHFAIDGAHPVGSVHHQKIVVVDDAVAFCGGIDLTL
DRWDTRAHEHTSRRRRTAGRGYGPRHDVGVAVDGAAARALGEQARTRWQTATKQSLSPVTAKHSAWPSKLRPTLRNVDVG
IALTLPDLDDRPEVRQVEALNLAAIAAARDTIYVENQYLASRTIAQALAQRLREEHGPQIVIVLARKGNNPLERGTMDSA
RHRLIRLLWDADEHHRLGVYWPVTDGGAPIYIHSKVLAVDDRLLRIGSSNFNNRSMGFDSECDVAIEARGSQHDDVRREI
TSVRNELVAEHLGVPVATLQEAIADRGSLLAAVEELRGDGKTLRPFTERTVANEAGPLAENELMDPDHVPRSLTRSVQRL
ITGRRG
>Mature_486_residues
MVHSRMPALLTPGQTCWRTARADRFAAIIDAADYFRHVKAAMLRARHRIMLVGWDFDSRVTFERGDKTLPGPNQLGAFLF
WMVRKRPALQIHLLKSNLRLLPALDGLWFGLTPVSLLNQISSRRMHFAIDGAHPVGSVHHQKIVVVDDAVAFCGGIDLTL
DRWDTRAHEHTSRRRRTAGRGYGPRHDVGVAVDGAAARALGEQARTRWQTATKQSLSPVTAKHSAWPSKLRPTLRNVDVG
IALTLPDLDDRPEVRQVEALNLAAIAAARDTIYVENQYLASRTIAQALAQRLREEHGPQIVIVLARKGNNPLERGTMDSA
RHRLIRLLWDADEHHRLGVYWPVTDGGAPIYIHSKVLAVDDRLLRIGSSNFNNRSMGFDSECDVAIEARGSQHDDVRREI
TSVRNELVAEHLGVPVATLQEAIADRGSLLAAVEELRGDGKTLRPFTERTVANEAGPLAENELMDPDHVPRSLTRSVQRL
ITGRRG

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54175; Mature: 54175

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHSRMPALLTPGQTCWRTARADRFAAIIDAADYFRHVKAAMLRARHRIMLVGWDFDSRV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEE
TFERGDKTLPGPNQLGAFLFWMVRKRPALQIHLLKSNLRLLPALDGLWFGLTPVSLLNQI
EECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCHHHCCCHHHHHHHH
SSRRMHFAIDGAHPVGSVHHQKIVVVDDAVAFCGGIDLTLDRWDTRAHEHTSRRRRTAGR
HHCCEEEEEECCCCCCCCCCCEEEEEECHHHHHCCCEEEEECHHHHHHHHHHHHHHHCCC
GYGPRHDVGVAVDGAAARALGEQARTRWQTATKQSLSPVTAKHSAWPSKLRPTLRNVDVG
CCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHCCHHHCCCEE
IALTLPDLDDRPEVRQVEALNLAAIAAARDTIYVENQYLASRTIAQALAQRLREEHGPQI
EEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHCCCEE
VIVLARKGNNPLERGTMDSARHRLIRLLWDADEHHRLGVYWPVTDGGAPIYIHSKVLAVD
EEEEEECCCCCHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECEEEEHH
DRLLRIGSSNFNNRSMGFDSECDVAIEARGSQHDDVRREITSVRNELVAEHLGVPVATLQ
HHHHEECCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
EAIADRGSLLAAVEELRGDGKTLRPFTERTVANEAGPLAENELMDPDHVPRSLTRSVQRL
HHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHH
ITGRRG
HCCCCC
>Mature Secondary Structure
MVHSRMPALLTPGQTCWRTARADRFAAIIDAADYFRHVKAAMLRARHRIMLVGWDFDSRV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEE
TFERGDKTLPGPNQLGAFLFWMVRKRPALQIHLLKSNLRLLPALDGLWFGLTPVSLLNQI
EECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCHHHCCCHHHHHHHH
SSRRMHFAIDGAHPVGSVHHQKIVVVDDAVAFCGGIDLTLDRWDTRAHEHTSRRRRTAGR
HHCCEEEEEECCCCCCCCCCCEEEEEECHHHHHCCCEEEEECHHHHHHHHHHHHHHHCCC
GYGPRHDVGVAVDGAAARALGEQARTRWQTATKQSLSPVTAKHSAWPSKLRPTLRNVDVG
CCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHCCHHHCCCEE
IALTLPDLDDRPEVRQVEALNLAAIAAARDTIYVENQYLASRTIAQALAQRLREEHGPQI
EEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHCCCEE
VIVLARKGNNPLERGTMDSARHRLIRLLWDADEHHRLGVYWPVTDGGAPIYIHSKVLAVD
EEEEEECCCCCHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECEEEEHH
DRLLRIGSSNFNNRSMGFDSECDVAIEARGSQHDDVRREITSVRNELVAEHLGVPVATLQ
HHHHEECCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
EAIADRGSLLAAVEELRGDGKTLRPFTERTVANEAGPLAENELMDPDHVPRSLTRSVQRL
HHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHH
ITGRRG
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA