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The map label for this gene is 41409254

Identifier: 41409254

GI number: 41409254

Start: 3509580

End: 3510176

Strand: Reverse

Name: 41409254

Synonym: MAP3156c

Alternate gene names: NA

Gene position: 3510176-3509580 (Counterclockwise)

Preceding gene: 41409256

Following gene: 41409253

Centisome position: 72.68

GC content: 71.19

Gene sequence:

>597_bases
ATGTCCAGCCCCAGCCGGTGGGCCGGTGTACCGCTCAAGGACCGCCGCGCCGAGCGACGTGCGCTGCTGGTCGAGGCCGC
GTATCGGCTGTTCGGCAGCGGGGGAGAGGCGGCCGTCTCGGTGCGCTCGGTGTGCCGGGAGTGCGGTTTGAACACCCGGT
ACTTCTACGAGAGCTTCCGCGATACCGACGACCTGCTCGGCGCGGTCTACGACCGGGTCAGCGAGCAACTCGAAGAAGTG
ATCGCGGCCGCCATCGAGCAGGCCGGGGATTCGCTGCGCGCCCGGACCCGGGCCGGCATCGCGGCGGTGCTGGGCTTCTC
CTCGGCCGATCCGCGCCGCGGCCGGGTGCTGTTCACCGATGCCCGCACCAACCCGGTGCTGGCAGCCCGGCGCCGCGCCA
CCCAGGACATGTTGCGCCAGGGGGTGCTGAGCGAGGGCTGGCGTCTGAATCCGCGCTCCGATCCGGTGGCCGCCGAGGTG
GCCGCGGCCATGTACACCGGCGCCATGGCCGAGCTTGCCCAGCAGTGGCTGGCCGGTCATTTGGGCGGTGATCTCGACGC
CGTCGTCGATTACGCTTCGAAGCTGGTGCTGCGGTAG

Upstream 100 bases:

>100_bases
CACAGCGCACTCCCTCAAACTTTGGTCACGGCCGTGACCAGAATATGTTTCTGGTTACAGGTGTGACAAGACCGGGGCGA
TGTCGACTTAGGCTGTAGGG

Downstream 100 bases:

>100_bases
CGGGGAGTGCGGTCATGGCGCGGATCGACAATGCGATGGACCCCGTGCGGCGCGTGCTGCGACACCAGATCAGCGTCGGC
GCGCTCATCGAGTTGGCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Tetr Family Transcriptional Regulator; AcrR Family Transcriptional Regulator; Regulatory Protein TetR; FadD27 Protein

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MSSPSRWAGVPLKDRRAERRALLVEAAYRLFGSGGEAAVSVRSVCRECGLNTRYFYESFRDTDDLLGAVYDRVSEQLEEV
IAAAIEQAGDSLRARTRAGIAAVLGFSSADPRRGRVLFTDARTNPVLAARRRATQDMLRQGVLSEGWRLNPRSDPVAAEV
AAAMYTGAMAELAQQWLAGHLGGDLDAVVDYASKLVLR

Sequences:

>Translated_198_residues
MSSPSRWAGVPLKDRRAERRALLVEAAYRLFGSGGEAAVSVRSVCRECGLNTRYFYESFRDTDDLLGAVYDRVSEQLEEV
IAAAIEQAGDSLRARTRAGIAAVLGFSSADPRRGRVLFTDARTNPVLAARRRATQDMLRQGVLSEGWRLNPRSDPVAAEV
AAAMYTGAMAELAQQWLAGHLGGDLDAVVDYASKLVLR
>Mature_197_residues
SSPSRWAGVPLKDRRAERRALLVEAAYRLFGSGGEAAVSVRSVCRECGLNTRYFYESFRDTDDLLGAVYDRVSEQLEEVI
AAAIEQAGDSLRARTRAGIAAVLGFSSADPRRGRVLFTDARTNPVLAARRRATQDMLRQGVLSEGWRLNPRSDPVAAEVA
AAMYTGAMAELAQQWLAGHLGGDLDAVVDYASKLVLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21576; Mature: 21444

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPSRWAGVPLKDRRAERRALLVEAAYRLFGSGGEAAVSVRSVCRECGLNTRYFYESFR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHC
DTDDLLGAVYDRVSEQLEEVIAAAIEQAGDSLRARTRAGIAAVLGFSSADPRRGRVLFTD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC
ARTNPVLAARRRATQDMLRQGVLSEGWRLNPRSDPVAAEVAAAMYTGAMAELAQQWLAGH
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGDLDAVVDYASKLVLR
CCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSPSRWAGVPLKDRRAERRALLVEAAYRLFGSGGEAAVSVRSVCRECGLNTRYFYESFR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHC
DTDDLLGAVYDRVSEQLEEVIAAAIEQAGDSLRARTRAGIAAVLGFSSADPRRGRVLFTD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC
ARTNPVLAARRRATQDMLRQGVLSEGWRLNPRSDPVAAEVAAAMYTGAMAELAQQWLAGH
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGDLDAVVDYASKLVLR
CCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA