| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409242
Identifier: 41409242
GI number: 41409242
Start: 3498615
End: 3498998
Strand: Reverse
Name: 41409242
Synonym: MAP3144c
Alternate gene names: NA
Gene position: 3498998-3498615 (Counterclockwise)
Preceding gene: 41409243
Following gene: 41409239
Centisome position: 72.45
GC content: 64.32
Gene sequence:
>384_bases GTGACCGAGTTCCTGAACCTCGAAGACTTGCTAGACATTGCCCGCGCGGCCGTCGGGACCAATGTCGTGGTCGCGGACTA CGGCTTGCTTGAATCGGCTCTGGCACGGCCTCGCGCCTCGGCGTTCGGCCGGGATGCCTACCCGGATCTGCACGTGAAGG CCGCCGCACTGCTGCACTCCCTGGCCCGGAATCACGCGCTGGTGGACGGCAACAAGCGACTCGCTTGGACGGCCTGCCGG ACTTTCCTGGCCATCAATGCGCACTGGATTGAGGCGCCGGAGGATGAGCGCTTCGACTTCGTGATCGGAGTCGCTACCGG TGCATTGACCAGTCTGGACGAGATCGCGGAGCGACTGCGCAGCTGGAGCTACCAAGAGGACTGA
Upstream 100 bases:
>100_bases ACGAGTACATCGCCCGACGAGCGCACAAGACTAAGGTTGCCGCGGCGCTGCAATGGGTCGTCCGCGAGGAGGCCGGGGTT TTGGAGCGTCTTAAGGACGC
Downstream 100 bases:
>100_bases GTCCGACGGCAATCTCGACGACGGCCGCGACGGAGTCAGACGACGGCTAGCAGAGCACTGCGGCCGAGAACCACCCGCCG GCCACCAGCGCGATGAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Death-On-Curing Protein; Death On Curing Protein; Fic Family xin-Antitoxin System Toxin Component; Prophage Maintenance System Killer Protein; Filamentation Induced By CAMP Protein Fic; TasB-Like Protein; Death-On-Curing Protein DOC; Doc Protein
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MTEFLNLEDLLDIARAAVGTNVVVADYGLLESALARPRASAFGRDAYPDLHVKAAALLHSLARNHALVDGNKRLAWTACR TFLAINAHWIEAPEDERFDFVIGVATGALTSLDEIAERLRSWSYQED
Sequences:
>Translated_127_residues MTEFLNLEDLLDIARAAVGTNVVVADYGLLESALARPRASAFGRDAYPDLHVKAAALLHSLARNHALVDGNKRLAWTACR TFLAINAHWIEAPEDERFDFVIGVATGALTSLDEIAERLRSWSYQED >Mature_126_residues TEFLNLEDLLDIARAAVGTNVVVADYGLLESALARPRASAFGRDAYPDLHVKAAALLHSLARNHALVDGNKRLAWTACRT FLAINAHWIEAPEDERFDFVIGVATGALTSLDEIAERLRSWSYQED
Specific function: Unknown
COG id: COG3654
COG function: function code R; Prophage maintenance system killer protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14024; Mature: 13893
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEFLNLEDLLDIARAAVGTNVVVADYGLLESALARPRASAFGRDAYPDLHVKAAALLHS CCCCCCHHHHHHHHHHHHCCCEEEECHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHH LARNHALVDGNKRLAWTACRTFLAINAHWIEAPEDERFDFVIGVATGALTSLDEIAERLR HHHCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHH SWSYQED CCCCCCC >Mature Secondary Structure TEFLNLEDLLDIARAAVGTNVVVADYGLLESALARPRASAFGRDAYPDLHVKAAALLHS CCCCCHHHHHHHHHHHHCCCEEEECHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHH LARNHALVDGNKRLAWTACRTFLAINAHWIEAPEDERFDFVIGVATGALTSLDEIAERLR HHHCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHH SWSYQED CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA