| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409222
Identifier: 41409222
GI number: 41409222
Start: 3475296
End: 3476141
Strand: Reverse
Name: 41409222
Synonym: MAP3124c
Alternate gene names: NA
Gene position: 3476141-3475296 (Counterclockwise)
Preceding gene: 41409223
Following gene: 41409221
Centisome position: 71.97
GC content: 69.27
Gene sequence:
>846_bases GTGGTGATCAAGGTCGCTCCGCCGGGTGTGGCACCGGTTGCGCACCGCGATGTGCTGCGTCAGGCCCGCATCATCAAAGC GCTTGCGCCGACCGATGTTCCGGTTCCCCGGGTGTGCTGGGAGGACGCCGGGCAGGCACCGTACACGCCGCCGCTGTACG TGATGTCGCGCGTCGAAGGCGACTGTGGGGAACCGCTATTCGACGGCTGGCCGGCCGTGCCCGGCCTGGCCGACCGGTAC CGCAACGCGTGCCGGACCATGGCCGCGCTGCACCGCATCTCGCCGACCGAACTGGGGTTGGGCGGCGAACCGGTCACCGA TCCGGTGGCCGAAGTCCACCGCTGGTCCGACACGTTGGGGACCGTCGACCCGGCGCTGGCCCCCGGCTGGCCGAAAGTGC GTGACGCGCTGCTGGATTGCGCGCCGCGCGCGATGCCGCCCGCCGTGGTACACGGCGACTTCCGGCTGGGCAACCTGCTC GCCGACGGCCCGCGGATCAACGCGGTCATCGACTGGGAAATCTGGTCGATCGGCGACCCGCGCATCGACGTGGGCTGGTT CCTGATCAACTGCGACCCGGACACCTACCGGCGGGTGACGCCGCCGCACGGTGCGGTTCCCTCGACCGCCGAACTCGCCG ACCTCTACCTTCACGAATTGGGTTGCGATGCCGGCGATCTGGATTGGTTCAGCGCGCTGGCGTGTTTCAAGTCGGCGGCC ACCTGGTCGCTGATCGTCAAGCACAATCGGCGCCGATCCTCGCCGCGAGCCGAATTAGAGTCCATGGCAACGACTTTGCC GAGGCTGTTGGATCGCGCCGGGGCGCTGCTGGCTCGGCGCCGATGA
Upstream 100 bases:
>100_bases CCTGCGCGGCCGGCTGGCCGGCGCGGGTATCACCGACGTCACCCCGCTGTCCGGCGGCGCGTCCGGCCTCACCTTCGCCG GCATTCGCGACGGCCGGCCG
Downstream 100 bases:
>100_bases GTGTTACTGGCAGCGGACCAGCAGATTTTCGCAGATCATCCCGACGTCGCCCGAGTCGTTCACCGGCTGGCCCTCGTTGG ACGGGTTGGTCCAGGTGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Phosphotransferase Family; Acyl-CoA Dehydrogenase; Acyl-Co A Dehydrogenase; Acyl-CoA Dehydrogenase Domain-Containing Protein; Acyl-CoA Dehydrogenase FadE; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Acyl-Coa Dehydrogenase Fade
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MVIKVAPPGVAPVAHRDVLRQARIIKALAPTDVPVPRVCWEDAGQAPYTPPLYVMSRVEGDCGEPLFDGWPAVPGLADRY RNACRTMAALHRISPTELGLGGEPVTDPVAEVHRWSDTLGTVDPALAPGWPKVRDALLDCAPRAMPPAVVHGDFRLGNLL ADGPRINAVIDWEIWSIGDPRIDVGWFLINCDPDTYRRVTPPHGAVPSTAELADLYLHELGCDAGDLDWFSALACFKSAA TWSLIVKHNRRRSSPRAELESMATTLPRLLDRAGALLARRR
Sequences:
>Translated_281_residues MVIKVAPPGVAPVAHRDVLRQARIIKALAPTDVPVPRVCWEDAGQAPYTPPLYVMSRVEGDCGEPLFDGWPAVPGLADRY RNACRTMAALHRISPTELGLGGEPVTDPVAEVHRWSDTLGTVDPALAPGWPKVRDALLDCAPRAMPPAVVHGDFRLGNLL ADGPRINAVIDWEIWSIGDPRIDVGWFLINCDPDTYRRVTPPHGAVPSTAELADLYLHELGCDAGDLDWFSALACFKSAA TWSLIVKHNRRRSSPRAELESMATTLPRLLDRAGALLARRR >Mature_281_residues MVIKVAPPGVAPVAHRDVLRQARIIKALAPTDVPVPRVCWEDAGQAPYTPPLYVMSRVEGDCGEPLFDGWPAVPGLADRY RNACRTMAALHRISPTELGLGGEPVTDPVAEVHRWSDTLGTVDPALAPGWPKVRDALLDCAPRAMPPAVVHGDFRLGNLL ADGPRINAVIDWEIWSIGDPRIDVGWFLINCDPDTYRRVTPPHGAVPSTAELADLYLHELGCDAGDLDWFSALACFKSAA TWSLIVKHNRRRSSPRAELESMATTLPRLLDRAGALLARRR
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI48976061, Length=267, Percent_Identity=28.0898876404494, Blast_Score=82, Evalue=8e-16, Organism=Homo sapiens, GI211971008, Length=267, Percent_Identity=28.0898876404494, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI38505218, Length=257, Percent_Identity=26.8482490272374, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17562446, Length=301, Percent_Identity=23.5880398671096, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30704; Mature: 30704
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIKVAPPGVAPVAHRDVLRQARIIKALAPTDVPVPRVCWEDAGQAPYTPPLYVMSRVEG CEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCC DCGEPLFDGWPAVPGLADRYRNACRTMAALHRISPTELGLGGEPVTDPVAEVHRWSDTLG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHC TVDPALAPGWPKVRDALLDCAPRAMPPAVVHGDFRLGNLLADGPRINAVIDWEIWSIGDP CCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCEECCEECCCCCEEEEEEEEEEECCCC RIDVGWFLINCDPDTYRRVTPPHGAVPSTAELADLYLHELGCDAGDLDWFSALACFKSAA EEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC TWSLIVKHNRRRSSPRAELESMATTLPRLLDRAGALLARRR HHHHEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVIKVAPPGVAPVAHRDVLRQARIIKALAPTDVPVPRVCWEDAGQAPYTPPLYVMSRVEG CEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCC DCGEPLFDGWPAVPGLADRYRNACRTMAALHRISPTELGLGGEPVTDPVAEVHRWSDTLG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHC TVDPALAPGWPKVRDALLDCAPRAMPPAVVHGDFRLGNLLADGPRINAVIDWEIWSIGDP CCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCEECCEECCCCCEEEEEEEEEEECCCC RIDVGWFLINCDPDTYRRVTPPHGAVPSTAELADLYLHELGCDAGDLDWFSALACFKSAA EEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC TWSLIVKHNRRRSSPRAELESMATTLPRLLDRAGALLARRR HHHHEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA