| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is yieF [H]
Identifier: 41409202
GI number: 41409202
Start: 3451153
End: 3451749
Strand: Reverse
Name: yieF [H]
Synonym: MAP3104c
Alternate gene names: 41409202
Gene position: 3451749-3451153 (Counterclockwise)
Preceding gene: 41409205
Following gene: 41409201
Centisome position: 71.47
GC content: 69.18
Gene sequence:
>597_bases GTGCGAGGATGGACACCAACAACCGAAGGGAACTGGCGAATCGTGGCAATCAAAATCTTGGCATTAGTGGGAAGCCTGCG CTCGGCGTCGATCAACCGCCAGATCGCGGAGCTGGCGAGCGCTGTCGCCGGCGAGGACGTCGTCGTCACCGTCTTCGAGG GGCTCGGCGAGCTGCCGTTCTACAACGAGGAGATCGACGACGCGATGACCAGCGACGCGCCGCCGCTGGCCCCGGTGGCC GCGCTGCGCGCCGCGGCGGCCGACGCCGACGCCGCGCTGGTGGTCACCCCCGAGTACAACGGCAGCATCCCGGCGGTCAT CAAGAACGCGATCGACTGGTTGTCCCGCCCGTTCGGCGACGGCGCGCTGAAGGGCAAGCCGCTGGCCGTCATCGGGGGGT CTTTCGGCCAGTACGGGGGAGTGTGGGCGCACGACGAGACCCGCAAGTCCTTCGGGATCGCCGGGGCGCGGGTGGTCGAG TCGATCAAGCTGTCCGTGCCGTTCAAGACGCTGGCCGGCAAGGCGCCCGCCGAGCATGCCGAACTGTCGGCGAACGTGCG CGACGTGGTCGGCAAGCTGGCCGCCGAGGTCGGCTGA
Upstream 100 bases:
>100_bases CCCGCGGATCGCAGAACCGCAGTTGACCCCGCTGCTCGACACCGCTCACTCCTGCACTTTAACGCTGCCGGAATAAAACG GACCATAGTCCGGTTGGCCC
Downstream 100 bases:
>100_bases TTGGCGGAAATCGACAACCCGGTCACCGGGCGACCAGCGCGGTTGTGAGACCGGCATGGCAGAAGCCGCCAGCTTCGGCT GGCGGCTTTGCTGGCTGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MRGWTPTTEGNWRIVAIKILALVGSLRSASINRQIAELASAVAGEDVVVTVFEGLGELPFYNEEIDDAMTSDAPPLAPVA ALRAAAADADAALVVTPEYNGSIPAVIKNAIDWLSRPFGDGALKGKPLAVIGGSFGQYGGVWAHDETRKSFGIAGARVVE SIKLSVPFKTLAGKAPAEHAELSANVRDVVGKLAAEVG
Sequences:
>Translated_198_residues MRGWTPTTEGNWRIVAIKILALVGSLRSASINRQIAELASAVAGEDVVVTVFEGLGELPFYNEEIDDAMTSDAPPLAPVA ALRAAAADADAALVVTPEYNGSIPAVIKNAIDWLSRPFGDGALKGKPLAVIGGSFGQYGGVWAHDETRKSFGIAGARVVE SIKLSVPFKTLAGKAPAEHAELSANVRDVVGKLAAEVG >Mature_198_residues MRGWTPTTEGNWRIVAIKILALVGSLRSASINRQIAELASAVAGEDVVVTVFEGLGELPFYNEEIDDAMTSDAPPLAPVA ALRAAAADADAALVVTPEYNGSIPAVIKNAIDWLSRPFGDGALKGKPLAVIGGSFGQYGGVWAHDETRKSFGIAGARVVE SIKLSVPFKTLAGKAPAEHAELSANVRDVVGKLAAEVG
Specific function: Unknown
COG id: COG0431
COG function: function code R; Predicted flavoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family [H]
Homologues:
Organism=Escherichia coli, GI1790149, Length=143, Percent_Identity=34.2657342657343, Blast_Score=79, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 20562; Mature: 20562
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGWTPTTEGNWRIVAIKILALVGSLRSASINRQIAELASAVAGEDVVVTVFEGLGELPF CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHCCCCCCC YNEEIDDAMTSDAPPLAPVAALRAAAADADAALVVTPEYNGSIPAVIKNAIDWLSRPFGD CCCHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCC GALKGKPLAVIGGSFGQYGGVWAHDETRKSFGIAGARVVESIKLSVPFKTLAGKAPAEHA CCCCCCCEEEECCCCCCCCCEECCCHHHHHHCCHHHHHHHHHHHCCCHHHHCCCCCCHHH ELSANVRDVVGKLAAEVG HHHCCHHHHHHHHHHHCC >Mature Secondary Structure MRGWTPTTEGNWRIVAIKILALVGSLRSASINRQIAELASAVAGEDVVVTVFEGLGELPF CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHCCCCCCC YNEEIDDAMTSDAPPLAPVAALRAAAADADAALVVTPEYNGSIPAVIKNAIDWLSRPFGD CCCHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCC GALKGKPLAVIGGSFGQYGGVWAHDETRKSFGIAGARVVESIKLSVPFKTLAGKAPAEHA CCCCCCCEEEECCCCCCCCCEECCCHHHHHHCCHHHHHHHHHHHCCCHHHHCCCCCCHHH ELSANVRDVVGKLAAEVG HHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]