| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is abcX [H]
Identifier: 41409187
GI number: 41409187
Start: 3436233
End: 3437075
Strand: Reverse
Name: abcX [H]
Synonym: MAP3089c
Alternate gene names: 41409187
Gene position: 3437075-3436233 (Counterclockwise)
Preceding gene: 41409188
Following gene: 41409186
Centisome position: 71.16
GC content: 72.12
Gene sequence:
>843_bases GTGCCCGAAAACGACAGTGCGGCAGCCGACCCTGATCTGCTGATCGAGTTGCGCGACGTGTCGCTGCGGCGCGGCGGCAA CGTCTTGGTCGGGCCGCTGGACTGGGCGGTCGAACTGGACGAGCGGTGGGTGATCGTCGGGCCCAACGGGGCCGGCAAGA CCTCGCTGCTGCGGATCGCCGCGGCGGCCGAACACCCTTCGTCGGGCGTGGCTTTCGTGCTCGGCGAGCGGCTGGGCCGG GTCGACGTGACGGAGTTGCGGTCGCGGATCGGGCTGTCGTCCTCGGCGCTGGCGCAGCGGGTGCCCAGCGACGAGGTGGT GCGCGATCTGGTCGTGTCGGCCGGCTACGCGGTGCTGGGCCGGTGGCGGGAGCGCTACGAGGACATCGACTACCGCCGGG CCGTCGACATGCTGGAGAGCCTGGGCGCCGAGCACCTGGCCGACCGAAGCTACGGGACGCTGTCCGAAGGCGAGCGCAAG CGGGTGCTGATCGCCCGCGCGCTGATGACCGACCCCGAGCTGCTGCTGCTCGACGAGCCCGCCGCGGGCCTGGACCTGGG CGGCCGTGAGGAGCTGGTGGCGCGGCTGGCCGACCTGGCCGCCGACCCCGACGCACCCGCGCTGGTGCTGGTCACCCATC ACGTCGAGGAGATACCGCCGGGTTTCAGTCACTGCATGCTGCTCTCGGAGGGTCGGGTGGTCGCCGCCGGACTGCTGACC GACGTGCTCACCTCGGAGAATCTGTCCACCGCGTTCGGCCAGGCGATCGCGCTCGACGTCGTCGACGGGCGCTACTTCGC GCGGCGCGTCCGCACCCGCGCAGCCCACCGGAGGCAGCTATGA
Upstream 100 bases:
>100_bases GGCGAGGTGCGCCGGGTGGAGATCCCGCCGGAGTAAGCGCGGCGAGTAATCGCGGCGACCCGGCAGGTGTGCGGGCGTCG CGGTACGGCACGATGGTCGG
Downstream 100 bases:
>100_bases CCTCACCCGAGGAAGCCCCGCTCGTCCCGCGGCCCGCAGCCACCGTGATGCTGGTCCGCGACGCCCCAGCCGGCCTGAAG GTGTTCCTGATGCGCCGGCA
Product: hypothetical protein
Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MPENDSAAADPDLLIELRDVSLRRGGNVLVGPLDWAVELDERWVIVGPNGAGKTSLLRIAAAAEHPSSGVAFVLGERLGR VDVTELRSRIGLSSSALAQRVPSDEVVRDLVVSAGYAVLGRWRERYEDIDYRRAVDMLESLGAEHLADRSYGTLSEGERK RVLIARALMTDPELLLLDEPAAGLDLGGREELVARLADLAADPDAPALVLVTHHVEEIPPGFSHCMLLSEGRVVAAGLLT DVLTSENLSTAFGQAIALDVVDGRYFARRVRTRAAHRRQL
Sequences:
>Translated_280_residues MPENDSAAADPDLLIELRDVSLRRGGNVLVGPLDWAVELDERWVIVGPNGAGKTSLLRIAAAAEHPSSGVAFVLGERLGR VDVTELRSRIGLSSSALAQRVPSDEVVRDLVVSAGYAVLGRWRERYEDIDYRRAVDMLESLGAEHLADRSYGTLSEGERK RVLIARALMTDPELLLLDEPAAGLDLGGREELVARLADLAADPDAPALVLVTHHVEEIPPGFSHCMLLSEGRVVAAGLLT DVLTSENLSTAFGQAIALDVVDGRYFARRVRTRAAHRRQL >Mature_279_residues PENDSAAADPDLLIELRDVSLRRGGNVLVGPLDWAVELDERWVIVGPNGAGKTSLLRIAAAAEHPSSGVAFVLGERLGRV DVTELRSRIGLSSSALAQRVPSDEVVRDLVVSAGYAVLGRWRERYEDIDYRRAVDMLESLGAEHLADRSYGTLSEGERKR VLIARALMTDPELLLLDEPAAGLDLGGREELVARLADLAADPDAPALVLVTHHVEEIPPGFSHCMLLSEGRVVAAGLLTD VLTSENLSTAFGQAIALDVVDGRYFARRVRTRAAHRRQL
Specific function: Part Of The Binding-Protein-Dependent Transport System For Ferric Enterobactin. Probably Responsible For Energy Coupling To The Transport System. [C]
COG id: COG1119
COG function: function code P; ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI116734710, Length=259, Percent_Identity=27.7992277992278, Blast_Score=72, Evalue=5e-13, Organism=Escherichia coli, GI1786803, Length=214, Percent_Identity=33.1775700934579, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1786975, Length=200, Percent_Identity=33, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI87081709, Length=229, Percent_Identity=27.9475982532751, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1786319, Length=185, Percent_Identity=33.5135135135135, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1788761, Length=223, Percent_Identity=31.390134529148, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1787089, Length=241, Percent_Identity=29.4605809128631, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1787029, Length=226, Percent_Identity=29.2035398230088, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1788450, Length=237, Percent_Identity=32.4894514767932, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1786345, Length=244, Percent_Identity=25.8196721311475, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1790467, Length=223, Percent_Identity=29.5964125560538, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1788897, Length=236, Percent_Identity=27.5423728813559, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786698, Length=209, Percent_Identity=26.3157894736842, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1786253, Length=217, Percent_Identity=26.2672811059908, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1789864, Length=234, Percent_Identity=25.2136752136752, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI87081834, Length=204, Percent_Identity=27.9411764705882, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1786563, Length=207, Percent_Identity=30.9178743961353, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI87081782, Length=234, Percent_Identity=26.0683760683761, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1787712, Length=219, Percent_Identity=28.7671232876712, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI48994943, Length=239, Percent_Identity=26.7782426778243, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI87081791, Length=225, Percent_Identity=26.6666666666667, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1790739, Length=210, Percent_Identity=27.6190476190476, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1786872, Length=223, Percent_Identity=27.8026905829596, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788165, Length=200, Percent_Identity=27.5, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1789032, Length=215, Percent_Identity=27.906976744186, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1788225, Length=233, Percent_Identity=26.6094420600858, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787547, Length=268, Percent_Identity=24.6268656716418, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1787370, Length=224, Percent_Identity=27.2321428571429, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1789593, Length=215, Percent_Identity=29.3023255813954, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1787164, Length=219, Percent_Identity=29.2237442922374, Blast_Score=64, Evalue=7e-12, Organism=Escherichia coli, GI1786398, Length=205, Percent_Identity=24.8780487804878, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1787792, Length=220, Percent_Identity=25.4545454545455, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI1787105, Length=175, Percent_Identity=32, Blast_Score=61, Evalue=9e-11, Organism=Escherichia coli, GI1789586, Length=225, Percent_Identity=28, Blast_Score=61, Evalue=9e-11, Organism=Escherichia coli, GI1788644, Length=204, Percent_Identity=29.4117647058824, Blast_Score=61, Evalue=1e-10, Organism=Caenorhabditis elegans, GI71983516, Length=239, Percent_Identity=28.4518828451883, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71983510, Length=239, Percent_Identity=28.4518828451883, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71983523, Length=239, Percent_Identity=28.4518828451883, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17565586, Length=177, Percent_Identity=28.2485875706215, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17510237, Length=235, Percent_Identity=23.8297872340426, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6320266, Length=234, Percent_Identity=31.1965811965812, Blast_Score=79, Evalue=5e-16, Organism=Drosophila melanogaster, GI161076682, Length=237, Percent_Identity=27.4261603375527, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI161076684, Length=237, Percent_Identity=27.4261603375527, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24581617, Length=237, Percent_Identity=27.4261603375527, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24581615, Length=237, Percent_Identity=27.4261603375527, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI85726357, Length=239, Percent_Identity=26.3598326359833, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI21357907, Length=211, Percent_Identity=29.3838862559242, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 30351; Mature: 30220
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPENDSAAADPDLLIELRDVSLRRGGNVLVGPLDWAVELDERWVIVGPNGAGKTSLLRIA CCCCCCCCCCCCEEEEEEHHHHHCCCCEEEECCCEEEEECCEEEEECCCCCCCHHHHHHH AAAEHPSSGVAFVLGERLGRVDVTELRSRIGLSSSALAQRVPSDEVVRDLVVSAGYAVLG HHCCCCCCCEEEEEHHHCCCCCHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCHHHHH RWRERYEDIDYRRAVDMLESLGAEHLADRSYGTLSEGERKRVLIARALMTDPELLLLDEP HHHHHHHCCHHHHHHHHHHHHCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECC AAGLDLGGREELVARLADLAADPDAPALVLVTHHVEEIPPGFSHCMLLSEGRVVAAGLLT CCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCHHHEEEECCCCEEHHHHHH DVLTSENLSTAFGQAIALDVVDGRYFARRVRTRAAHRRQL HHHHCCCHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure PENDSAAADPDLLIELRDVSLRRGGNVLVGPLDWAVELDERWVIVGPNGAGKTSLLRIA CCCCCCCCCCCEEEEEEHHHHHCCCCEEEECCCEEEEECCEEEEECCCCCCCHHHHHHH AAAEHPSSGVAFVLGERLGRVDVTELRSRIGLSSSALAQRVPSDEVVRDLVVSAGYAVLG HHCCCCCCCEEEEEHHHCCCCCHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCHHHHH RWRERYEDIDYRRAVDMLESLGAEHLADRSYGTLSEGERKRVLIARALMTDPELLLLDEP HHHHHHHCCHHHHHHHHHHHHCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECC AAGLDLGGREELVARLADLAADPDAPALVLVTHHVEEIPPGFSHCMLLSEGRVVAAGLLT CCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCHHHEEEECCCCEEHHHHHH DVLTSENLSTAFGQAIALDVVDGRYFARRVRTRAAHRRQL HHHHCCCHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]
Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11029425; 12397186 [H]