| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409181
Identifier: 41409181
GI number: 41409181
Start: 3430210
End: 3431328
Strand: Direct
Name: 41409181
Synonym: MAP3083
Alternate gene names: NA
Gene position: 3430210-3431328 (Clockwise)
Preceding gene: 41409179
Following gene: 41409190
Centisome position: 71.02
GC content: 73.73
Gene sequence:
>1119_bases TTGCAGTGGACCCGCTCGGTCAAGGGCAGCCTGGCCGCCGGGCCGGCGCTGAGCGCCCGCGGTTACCTGGGCCTCAACGC CCAGACCCCGGCCGGCTGTTCGCTGATGGAGTGGGAGAACACCGACAACGGCCGGCAGCGGTGGTGCGTGCGGCTGGTCC AGGGCGGCGGCTTCGCCGGTCCGCTGCTCGACGGCTTCGACAACCTCTACGTCGGCCAGCCCGGGGCGTTCCTGTCGTTT CCGGTGACCCAGTGGACCCGCTGGCGCCAGCCGGTGATCGGCATGCCCACCACCCCGCGGTTCCTCGGGCACGGCCAGTT GCTGGTGGTCACGCATCTGGGACAGGTGCTGGTCTTCGACTCCCATCGCGGCCAGGTGGCCGGCAGCCCGCTGGATCTGG TGGACGGCGTCGATCCCACCGACGCGACGCGCGGGCTGGCCGATTGCGCGCCGGCCCGCCCGGATTGCCCGGTGCCGGCC GCCCCCGCCTTCTCGGCGGCCACCGGGATGGTGGTGCTCGGCGTCTGGCAGCCGGGCGCGCCCAGCGCGGGCCTGGTGGG GCTGAAGTATCACCCCGGGCAGTCCCCGCTGCTGACCCGGGAGTGGACCAGCGACGCGGTGGGCGCCGGTGTCATCGCCA GCCCGGTGCTGTCCGCGGACGGGTCGACGGTCTACGTCAACGGGCGCGACCAGCGGCTGTGGGCGCTGCGCGCGGCGGAC GCGAAGGTGAAGTGGTCGGCGCCGCTGGGATTTTTGGCGCAGACGCCGCCGGCGGTCACCCCGCAGGGGCTGATCGTGGC GGGCGGCGGCCCGGACACCCGGCTGGCGGCGTTCCGGGACGCCGGCGACCACGCCGACCAGGTGTGGCGCCGCGACGACC TGATCCCGCTGTCGTCGTCCAGCCTGGCGGGTGTCGGCTACACGGTGGTCAGCGGGCCCCCGGCCAATGGCGCGCCGGGG ATGTCGGTGCTGGTCTTCGATCCCGGTGACGGCCACACGCTGAACAGCTATCCGCTGCCGGCGGCGACCGGCTATCCGCT GGGCGTTTCGGTCGGCACCGATCGCCGGGTGGTGGCCGCGATCAGCGACGGTCAGGTTTACGGTTTCGCACCGGCCTGA
Upstream 100 bases:
>100_bases CTCGTGGGTGGAAGCGTCGGCCGCGCAAGGCTGGCCGGCCCAGTACGCGGACGCCGCCAACAGCGGCTACACCAGCACCG GCGGGGCCAGCAAGCTCGCG
Downstream 100 bases:
>100_bases GCCGGCCATACTGTTGGCGTGCCGATCGACGACCCAACGACCAGCCCCCGGACCGGCGACGTCGCCACCACCAACACCGC CGACCTGGTGGCCACGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Pyrrolo-Quinoline Quinone Dehydrogenase
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MQWTRSVKGSLAAGPALSARGYLGLNAQTPAGCSLMEWENTDNGRQRWCVRLVQGGGFAGPLLDGFDNLYVGQPGAFLSF PVTQWTRWRQPVIGMPTTPRFLGHGQLLVVTHLGQVLVFDSHRGQVAGSPLDLVDGVDPTDATRGLADCAPARPDCPVPA APAFSAATGMVVLGVWQPGAPSAGLVGLKYHPGQSPLLTREWTSDAVGAGVIASPVLSADGSTVYVNGRDQRLWALRAAD AKVKWSAPLGFLAQTPPAVTPQGLIVAGGGPDTRLAAFRDAGDHADQVWRRDDLIPLSSSSLAGVGYTVVSGPPANGAPG MSVLVFDPGDGHTLNSYPLPAATGYPLGVSVGTDRRVVAAISDGQVYGFAPA
Sequences:
>Translated_372_residues MQWTRSVKGSLAAGPALSARGYLGLNAQTPAGCSLMEWENTDNGRQRWCVRLVQGGGFAGPLLDGFDNLYVGQPGAFLSF PVTQWTRWRQPVIGMPTTPRFLGHGQLLVVTHLGQVLVFDSHRGQVAGSPLDLVDGVDPTDATRGLADCAPARPDCPVPA APAFSAATGMVVLGVWQPGAPSAGLVGLKYHPGQSPLLTREWTSDAVGAGVIASPVLSADGSTVYVNGRDQRLWALRAAD AKVKWSAPLGFLAQTPPAVTPQGLIVAGGGPDTRLAAFRDAGDHADQVWRRDDLIPLSSSSLAGVGYTVVSGPPANGAPG MSVLVFDPGDGHTLNSYPLPAATGYPLGVSVGTDRRVVAAISDGQVYGFAPA >Mature_372_residues MQWTRSVKGSLAAGPALSARGYLGLNAQTPAGCSLMEWENTDNGRQRWCVRLVQGGGFAGPLLDGFDNLYVGQPGAFLSF PVTQWTRWRQPVIGMPTTPRFLGHGQLLVVTHLGQVLVFDSHRGQVAGSPLDLVDGVDPTDATRGLADCAPARPDCPVPA APAFSAATGMVVLGVWQPGAPSAGLVGLKYHPGQSPLLTREWTSDAVGAGVIASPVLSADGSTVYVNGRDQRLWALRAAD AKVKWSAPLGFLAQTPPAVTPQGLIVAGGGPDTRLAAFRDAGDHADQVWRRDDLIPLSSSSLAGVGYTVVSGPPANGAPG MSVLVFDPGDGHTLNSYPLPAATGYPLGVSVGTDRRVVAAISDGQVYGFAPA
Specific function: Unknown
COG id: COG1520
COG function: function code S; FOG: WD40-like repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38545; Mature: 38545
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQWTRSVKGSLAAGPALSARGYLGLNAQTPAGCSLMEWENTDNGRQRWCVRLVQGGGFAG CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCC PLLDGFDNLYVGQPGAFLSFPVTQWTRWRQPVIGMPTTPRFLGHGQLLVVTHLGQVLVFD HHHHCCCCEEECCCCCEEECCHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEECCEEEEEE SHRGQVAGSPLDLVDGVDPTDATRGLADCAPARPDCPVPAAPAFSAATGMVVLGVWQPGA CCCCCCCCCCHHHHCCCCCCHHHCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC PSAGLVGLKYHPGQSPLLTREWTSDAVGAGVIASPVLSADGSTVYVNGRDQRLWALRAAD CCCCEEEEEECCCCCCEEEECCCCCCCCCCHHHCCEECCCCCEEEECCCCCEEEEEEECC AKVKWSAPLGFLAQTPPAVTPQGLIVAGGGPDTRLAAFRDAGDHADQVWRRDDLIPLSSS CEEEECCCCCHHHCCCCCCCCCCEEEECCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCC SLAGVGYTVVSGPPANGAPGMSVLVFDPGDGHTLNSYPLPAATGYPLGVSVGTDRRVVAA CCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEE ISDGQVYGFAPA EECCEEEEECCC >Mature Secondary Structure MQWTRSVKGSLAAGPALSARGYLGLNAQTPAGCSLMEWENTDNGRQRWCVRLVQGGGFAG CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCC PLLDGFDNLYVGQPGAFLSFPVTQWTRWRQPVIGMPTTPRFLGHGQLLVVTHLGQVLVFD HHHHCCCCEEECCCCCEEECCHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEECCEEEEEE SHRGQVAGSPLDLVDGVDPTDATRGLADCAPARPDCPVPAAPAFSAATGMVVLGVWQPGA CCCCCCCCCCHHHHCCCCCCHHHCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC PSAGLVGLKYHPGQSPLLTREWTSDAVGAGVIASPVLSADGSTVYVNGRDQRLWALRAAD CCCCEEEEEECCCCCCEEEECCCCCCCCCCHHHCCEECCCCCEEEECCCCCEEEEEEECC AKVKWSAPLGFLAQTPPAVTPQGLIVAGGGPDTRLAAFRDAGDHADQVWRRDDLIPLSSS CEEEECCCCCHHHCCCCCCCCCCEEEECCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCC SLAGVGYTVVSGPPANGAPGMSVLVFDPGDGHTLNSYPLPAATGYPLGVSVGTDRRVVAA CCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEE ISDGQVYGFAPA EECCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA