| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is fecB
Identifier: 41409190
GI number: 41409190
Start: 3440322
End: 3441416
Strand: Direct
Name: fecB
Synonym: MAP3092
Alternate gene names: 41409190
Gene position: 3440322-3441416 (Clockwise)
Preceding gene: 41409181
Following gene: 41409191
Centisome position: 71.23
GC content: 74.89
Gene sequence:
>1095_bases GTGTTGTTCGGCGTGATCAGGCCGGCCCGGCTGGCCGCGGTGACGGCGGCGCTGATGGTGGCGTGCGGCGGCTGCGGATC CGACAGGCCCGCCGCGACGACGACGCGTTCGCTGGTCACTCCCACCACCCAGATCGCCGGGGCCGGAGTGCTGGGCAACG ACCGCCGGCCCGACGAGTCGTGCGCCCGCGACGCCGCCGAGGCCGATCCGGGTCCGGCGAAGCGGCAGGTCCACAACGCG CCCGGCGCCGACCCGGCGCCGGTGCAGGTGTCCGCCGATCCGCAGCGCATCGTGGTGCTCGCCGGTGACCAGCTCGACGC GCTGTGCGCGCTGGGTCTGCAGTCGCGGGTGGTCGGCGCCGCCCTGCCGGACGGCGCCTCGGGCCAGCCCGCCTACCTCG GCGGCGCCGTGCGCGGCGTGCCCGGCGTGGGCAGCCGATCGCACCCCGACGTGAAGGCCATCGCGGCGGCCCACCCCGAT CTCATCCTGGGCTCGCAGGGGCTGACGCCCGCGCTGTACCCGCAGCTGGCCGCGATCGCCCCCACGGTGTTCACCGCGGC GCCGGGCGCGGCGTGGCGGGACAACCTGCGCGCAGTCGGCGCTGCCACCGCCCGCGCCGGCGCGGTCGACGGGCTGCTCA GCGGCTTTTCGCAACGGGCCGGCGACGTGGGCGCACGCCATGACGCCTCCCATTTCCAGGCGTCGATCGTGCAGTTGACG ACCGGCAGCATCCGGGTGTTCGGCGCCAACAACTTCCCGGCCAGCGTGCTGGGCGCGGTCGGGGTGGACCGGCCGGCCGC CCAGCGGTTCACCGACAAGCCCTATCTCGAGATCGGCGCCACCGACGCGGACCTGGCCAAGAATCCGGACCTCTCGGTCG CCGACGCCGACGTCGTCTACCTGTCCTGCGCCACGCCGGCCGCGGCCGACCGGGCCGCCACCGTCCTGGACAGCGGCCCG TGGCGCAAGCTGTCCGCCAATCGCGACAACCGCGTCTACGTCGTCAACGACGAGATCTGGCAGACCGGCCAGGGCCTGAT CGCGGCCCGCGGCATCGTCGACGACCTGCGGCTGGTGAACGCCCCGATCAACTGA
Upstream 100 bases:
>100_bases ACGTCAGGGCTGGTCCTACAAACTGTCGTAAACGGCTGACCGGCGCGGCGGGTCCGTCGGCGCGGCGGGAGCACGCTGGC CGGATGTTAGCGTCTGAGCC
Downstream 100 bases:
>100_bases GCCGCCGGCGGGTATCCCCCACGCGACAACGTGATCTTCGCCGCGCCGGTTGGCGCCAGAACCATTACCTTAGCTAAACT TTTTGGGAAAGCACGGCTGG
Product: hypothetical protein
Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MLFGVIRPARLAAVTAALMVACGGCGSDRPAATTTRSLVTPTTQIAGAGVLGNDRRPDESCARDAAEADPGPAKRQVHNA PGADPAPVQVSADPQRIVVLAGDQLDALCALGLQSRVVGAALPDGASGQPAYLGGAVRGVPGVGSRSHPDVKAIAAAHPD LILGSQGLTPALYPQLAAIAPTVFTAAPGAAWRDNLRAVGAATARAGAVDGLLSGFSQRAGDVGARHDASHFQASIVQLT TGSIRVFGANNFPASVLGAVGVDRPAAQRFTDKPYLEIGATDADLAKNPDLSVADADVVYLSCATPAAADRAATVLDSGP WRKLSANRDNRVYVVNDEIWQTGQGLIAARGIVDDLRLVNAPIN
Sequences:
>Translated_364_residues MLFGVIRPARLAAVTAALMVACGGCGSDRPAATTTRSLVTPTTQIAGAGVLGNDRRPDESCARDAAEADPGPAKRQVHNA PGADPAPVQVSADPQRIVVLAGDQLDALCALGLQSRVVGAALPDGASGQPAYLGGAVRGVPGVGSRSHPDVKAIAAAHPD LILGSQGLTPALYPQLAAIAPTVFTAAPGAAWRDNLRAVGAATARAGAVDGLLSGFSQRAGDVGARHDASHFQASIVQLT TGSIRVFGANNFPASVLGAVGVDRPAAQRFTDKPYLEIGATDADLAKNPDLSVADADVVYLSCATPAAADRAATVLDSGP WRKLSANRDNRVYVVNDEIWQTGQGLIAARGIVDDLRLVNAPIN >Mature_364_residues MLFGVIRPARLAAVTAALMVACGGCGSDRPAATTTRSLVTPTTQIAGAGVLGNDRRPDESCARDAAEADPGPAKRQVHNA PGADPAPVQVSADPQRIVVLAGDQLDALCALGLQSRVVGAALPDGASGQPAYLGGAVRGVPGVGSRSHPDVKAIAAAHPD LILGSQGLTPALYPQLAAIAPTVFTAAPGAAWRDNLRAVGAATARAGAVDGLLSGFSQRAGDVGARHDASHFQASIVQLT TGSIRVFGANNFPASVLGAVGVDRPAAQRFTDKPYLEIGATDADLAKNPDLSVADADVVYLSCATPAAADRAATVLDSGP WRKLSANRDNRVYVVNDEIWQTGQGLIAARGIVDDLRLVNAPIN
Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 36984; Mature: 36984
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFGVIRPARLAAVTAALMVACGGCGSDRPAATTTRSLVTPTTQIAGAGVLGNDRRPDES CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCCCCCCHH CARDAAEADPGPAKRQVHNAPGADPAPVQVSADPQRIVVLAGDQLDALCALGLQSRVVGA HHHHHHCCCCCHHHHHHCCCCCCCCCCEEECCCCCEEEEEECCCHHHHHHHHHHHHHHEE ALPDGASGQPAYLGGAVRGVPGVGSRSHPDVKAIAAAHPDLILGSQGLTPALYPQLAAIA ECCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCCHHHHHHHHHHH PTVFTAAPGAAWRDNLRAVGAATARAGAVDGLLSGFSQRAGDVGARHDASHFQASIVQLT HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEEEEEE TGSIRVFGANNFPASVLGAVGVDRPAAQRFTDKPYLEIGATDADLAKNPDLSVADADVVY CCEEEEEECCCCCHHHHHHHCCCCHHHHHCCCCCCEEECCCCHHHCCCCCCCEECCCEEE LSCATPAAADRAATVLDSGPWRKLSANRDNRVYVVNDEIWQTGQGLIAARGIVDDLRLVN EEECCCCCCCHHHHHHCCCCCEEECCCCCCEEEEECHHHHHCCCCEEEEHHHHHHHHHHC APIN CCCC >Mature Secondary Structure MLFGVIRPARLAAVTAALMVACGGCGSDRPAATTTRSLVTPTTQIAGAGVLGNDRRPDES CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCCCCCCHH CARDAAEADPGPAKRQVHNAPGADPAPVQVSADPQRIVVLAGDQLDALCALGLQSRVVGA HHHHHHCCCCCHHHHHHCCCCCCCCCCEEECCCCCEEEEEECCCHHHHHHHHHHHHHHEE ALPDGASGQPAYLGGAVRGVPGVGSRSHPDVKAIAAAHPDLILGSQGLTPALYPQLAAIA ECCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHCCCCEEECCCCCCHHHHHHHHHHH PTVFTAAPGAAWRDNLRAVGAATARAGAVDGLLSGFSQRAGDVGARHDASHFQASIVQLT HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEEEEEE TGSIRVFGANNFPASVLGAVGVDRPAAQRFTDKPYLEIGATDADLAKNPDLSVADADVVY CCEEEEEECCCCCHHHHHHHCCCCHHHHHCCCCCCEEECCCCHHHCCCCCCCEECCCEEE LSCATPAAADRAATVLDSGPWRKLSANRDNRVYVVNDEIWQTGQGLIAARGIVDDLRLVN EEECCCCCCCHHHHHHCCCCCEEECCCCCCEEEEECHHHHHCCCCEEEEHHHHHHHHHHC APIN CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]
Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8946165; 9384377 [H]