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The map label for this gene is crtI [H]

Identifier: 41409168

GI number: 41409168

Start: 3415762

End: 3417282

Strand: Direct

Name: crtI [H]

Synonym: MAP3070

Alternate gene names: 41409168

Gene position: 3415762-3417282 (Clockwise)

Preceding gene: 41409167

Following gene: 41409169

Centisome position: 70.72

GC content: 71.14

Gene sequence:

>1521_bases
ATGCGGGCCATCGAGGGCTCCGCCGATCACGTCGTGGTGATCGGGGCCGGTCTGGCCGGCCTGTCCGCGGCGCTGCACCT
GGCCGGTCGCGGGCGGGCGGTCACGGTCGTGGAGCGCGAAGCATGGCCGGGCGGTCGGGCGGGCCGGCGCGACATCGACG
GGTATCGGATCGACACCGGCCCCACGGTGCTCACCATGCCGGACATCATCGAGGACACCTTCGCCGCCGTCGGCGACACC
CTGGCCCGGCGACTGGAGCTGTGCACGCTGGATCCCGCGTACCGCGCCGTGTTCGCCGACGGCAGCAGCCTCGACATCCA
CCGCGATCCGGACCGGATGGCCGACGCCGTCGCCGAGTTCGCCGGCCGCGAGCAGGCGACGGGCTACCGGCGGCTGCGGG
CATGGCTGACGCGCCTGTACCGCACCGAGTTCGACGGATTCATCGCCGCCAATTTCGATTCACCGCTGTCGCTGCTCACC
CCCCGGCTGGCGCAGCTGATCGCGATCGGCGGTTTCCGCAACTGGGACCGCATGGTCAAGCGCTATCTCAGTGATCCGCG
GCTGCAGCGCATCTTCACCTTTCAATCGCTGTATGCCGGCGTGGCCCCGCGCGACGCCCTGGCGGTGTACGCGGTGATCG
CCTACATGGACACGGTCTCGGGCGTGGTGTTTCCGCGCGGCGGCGTCCGGGCGCTGCCCGACGCGCTGGCCGCCGCCGCC
TCCGACGCTGGGGTTCAGTTCCGTTATGGCACAACGGTGACCGCGCTCGAGAAGACCGGTGGGCGGGTCGGCGCCGTACT
CACCGAACAGGCCGGACGCATCTCCTGCGACGCGGTGGTGCTGACCACCGAGCTGCCGCAAACCTATGCGCTGCTGGGCC
GCACACCGCGTCGCGCGCTGCGGTTGCGGCACTCCCCCTCGGCGGTGGTGGCGCATGTGGGTTGTCCCGCGGTGGCATCG
CAGACCGCGCACCACACCATCTTGTTCGGCGACGCCTGGGATCACACGTTCGCCGACATCATCGGCGCCGGCCAACTCAT
GCGGGATCCGTCGCTGCTGGTCACCCGGCCGACGGCCAGCGACCCGACGCTGGCTCCGCGAGGACGCGACCTGCTCTATG
TGCTCGCCCCGGCGCCGAACCTGGAGTCGGGCGGCATCGACTGGGACAGCGTCGGGCGCGGCTACGTCGACGACCTCATC
GCGCTCGTCGGTCAGCGGCTTCTTCCCGGTTTGCCAGGCAGCGCAACGGTTTTGGATGTCGTCACACCCGCGGACTGGGC
GCGCCGGGGCATGGCCGCGGGCAGTCCGTTCGCGCTCGCGCACACGTTCGCCCAAACCGGCCCGTTCCGCCCGGCCAACA
TGGTGCGCGGCATCGACAACGCGGTGCTCGCCGGATCCTCCACGGTGCCCGGGGTCGGGGTGCCGACCACCCTGATCTCC
GGGCGACTCGCCGCGGACCGCATCACCGGCGTCAGCAAGCGAACGCCCGCGCGCATCGACATGAAAGCCGGTTCGCCATG
A

Upstream 100 bases:

>100_bases
CTGCCCGTCGACGAATCGGTGCGCGCCGCGCTGGCCGAGATGGCGGCCGTCTGTACGGATCGCGCCGAATGACCGCCACC
GGCACGGGAGTTCGGTGAGC

Downstream 100 bases:

>100_bases
TGCGCAGCGAATGGGCCGCGGCCGGAATCGAGGATCCGCTGCTGCGCGAGGGGTATCGCCGATGCCGCGAGCTCAACGCC
GCGCACGGCCGCACCTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MRAIEGSADHVVVIGAGLAGLSAALHLAGRGRAVTVVEREAWPGGRAGRRDIDGYRIDTGPTVLTMPDIIEDTFAAVGDT
LARRLELCTLDPAYRAVFADGSSLDIHRDPDRMADAVAEFAGREQATGYRRLRAWLTRLYRTEFDGFIAANFDSPLSLLT
PRLAQLIAIGGFRNWDRMVKRYLSDPRLQRIFTFQSLYAGVAPRDALAVYAVIAYMDTVSGVVFPRGGVRALPDALAAAA
SDAGVQFRYGTTVTALEKTGGRVGAVLTEQAGRISCDAVVLTTELPQTYALLGRTPRRALRLRHSPSAVVAHVGCPAVAS
QTAHHTILFGDAWDHTFADIIGAGQLMRDPSLLVTRPTASDPTLAPRGRDLLYVLAPAPNLESGGIDWDSVGRGYVDDLI
ALVGQRLLPGLPGSATVLDVVTPADWARRGMAAGSPFALAHTFAQTGPFRPANMVRGIDNAVLAGSSTVPGVGVPTTLIS
GRLAADRITGVSKRTPARIDMKAGSP

Sequences:

>Translated_506_residues
MRAIEGSADHVVVIGAGLAGLSAALHLAGRGRAVTVVEREAWPGGRAGRRDIDGYRIDTGPTVLTMPDIIEDTFAAVGDT
LARRLELCTLDPAYRAVFADGSSLDIHRDPDRMADAVAEFAGREQATGYRRLRAWLTRLYRTEFDGFIAANFDSPLSLLT
PRLAQLIAIGGFRNWDRMVKRYLSDPRLQRIFTFQSLYAGVAPRDALAVYAVIAYMDTVSGVVFPRGGVRALPDALAAAA
SDAGVQFRYGTTVTALEKTGGRVGAVLTEQAGRISCDAVVLTTELPQTYALLGRTPRRALRLRHSPSAVVAHVGCPAVAS
QTAHHTILFGDAWDHTFADIIGAGQLMRDPSLLVTRPTASDPTLAPRGRDLLYVLAPAPNLESGGIDWDSVGRGYVDDLI
ALVGQRLLPGLPGSATVLDVVTPADWARRGMAAGSPFALAHTFAQTGPFRPANMVRGIDNAVLAGSSTVPGVGVPTTLIS
GRLAADRITGVSKRTPARIDMKAGSP
>Mature_506_residues
MRAIEGSADHVVVIGAGLAGLSAALHLAGRGRAVTVVEREAWPGGRAGRRDIDGYRIDTGPTVLTMPDIIEDTFAAVGDT
LARRLELCTLDPAYRAVFADGSSLDIHRDPDRMADAVAEFAGREQATGYRRLRAWLTRLYRTEFDGFIAANFDSPLSLLT
PRLAQLIAIGGFRNWDRMVKRYLSDPRLQRIFTFQSLYAGVAPRDALAVYAVIAYMDTVSGVVFPRGGVRALPDALAAAA
SDAGVQFRYGTTVTALEKTGGRVGAVLTEQAGRISCDAVVLTTELPQTYALLGRTPRRALRLRHSPSAVVAHVGCPAVAS
QTAHHTILFGDAWDHTFADIIGAGQLMRDPSLLVTRPTASDPTLAPRGRDLLYVLAPAPNLESGGIDWDSVGRGYVDDLI
ALVGQRLLPGLPGSATVLDVVTPADWARRGMAAGSPFALAHTFAQTGPFRPANMVRGIDNAVLAGSSTVPGVGVPTTLIS
GRLAADRITGVSKRTPARIDMKAGSP

Specific function: This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11' positions of phytoene [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 53734; Mature: 53734

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAIEGSADHVVVIGAGLAGLSAALHLAGRGRAVTVVEREAWPGGRAGRRDIDGYRIDTG
CCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEECCC
PTVLTMPDIIEDTFAAVGDTLARRLELCTLDPAYRAVFADGSSLDIHRDPDRMADAVAEF
CEEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCCCCCCCHHHHHHHHHHH
AGREQATGYRRLRAWLTRLYRTEFDGFIAANFDSPLSLLTPRLAQLIAIGGFRNWDRMVK
HCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
RYLSDPRLQRIFTFQSLYAGVAPRDALAVYAVIAYMDTVSGVVFPRGGVRALPDALAAAA
HHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHH
SDAGVQFRYGTTVTALEKTGGRVGAVLTEQAGRISCDAVVLTTELPQTYALLGRTPRRAL
CCCCEEEEECCEEEEHHHCCCEEEEEEECCCCCEEECEEEEEECCCHHHHHHCCCHHHHH
RLRHSPSAVVAHVGCPAVASQTAHHTILFGDAWDHTFADIIGAGQLMRDPSLLVTRPTAS
HCCCCCCEEEEECCCCHHHCCCCCEEEEEECCCCHHHHHHHCCCHHHCCCCEEEECCCCC
DPTLAPRGRDLLYVLAPAPNLESGGIDWDSVGRGYVDDLIALVGQRLLPGLPGSATVLDV
CCCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEE
VTPADWARRGMAAGSPFALAHTFAQTGPFRPANMVRGIDNAVLAGSSTVPGVGVPTTLIS
ECCHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCEEECCCCCCCCCCCHHHHC
GRLAADRITGVSKRTPARIDMKAGSP
CCHHHHHHCCCCCCCCCEEEECCCCC
>Mature Secondary Structure
MRAIEGSADHVVVIGAGLAGLSAALHLAGRGRAVTVVEREAWPGGRAGRRDIDGYRIDTG
CCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEECCC
PTVLTMPDIIEDTFAAVGDTLARRLELCTLDPAYRAVFADGSSLDIHRDPDRMADAVAEF
CEEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCCCCCCCHHHHHHHHHHH
AGREQATGYRRLRAWLTRLYRTEFDGFIAANFDSPLSLLTPRLAQLIAIGGFRNWDRMVK
HCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
RYLSDPRLQRIFTFQSLYAGVAPRDALAVYAVIAYMDTVSGVVFPRGGVRALPDALAAAA
HHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHH
SDAGVQFRYGTTVTALEKTGGRVGAVLTEQAGRISCDAVVLTTELPQTYALLGRTPRRAL
CCCCEEEEECCEEEEHHHCCCEEEEEEECCCCCEEECEEEEEECCCHHHHHHCCCHHHHH
RLRHSPSAVVAHVGCPAVASQTAHHTILFGDAWDHTFADIIGAGQLMRDPSLLVTRPTAS
HCCCCCCEEEEECCCCHHHCCCCCEEEEEECCCCHHHHHHHCCCHHHCCCCEEEECCCCC
DPTLAPRGRDLLYVLAPAPNLESGGIDWDSVGRGYVDDLIALVGQRLLPGLPGSATVLDV
CCCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEE
VTPADWARRGMAAGSPFALAHTFAQTGPFRPANMVRGIDNAVLAGSSTVPGVGVPTTLIS
ECCHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCEEECCCCCCCCCCCHHHHC
GRLAADRITGVSKRTPARIDMKAGSP
CCHHHHHHCCCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8917308 [H]