Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409145

Identifier: 41409145

GI number: 41409145

Start: 3389661

End: 3390326

Strand: Direct

Name: 41409145

Synonym: MAP3047

Alternate gene names: NA

Gene position: 3389661-3390326 (Clockwise)

Preceding gene: 41409139

Following gene: 41409149

Centisome position: 70.18

GC content: 71.17

Gene sequence:

>666_bases
GTGTTGGCCGTGCCGTCCTATCTGTTGCGCATCGAGCTCCTCGACCGTCCGGGCAGCCTGGGATCGCTGGCGGTGGCGCT
CGGTTCGGTGGGAGCCGACATCCTCTCGCTGGACGTGGTGGACCGCAGCTCGGGTTATGCGATCGACGACCTGGTGATCG
AGCTGCCGGCCGGGGCCATGCCCGACACGTTGATCACCGCCGCCGAGTCACTGTCGGGGGTGCGGGTGGACAGTGTGCGT
CCGCACACCGGTCTGCTGGAGGCCCACCGCGAGCTGGAACTGCTCGACCACGTCGCCGCGGCCGACGACAAGACGGCCAG
GCTGCAGGTGCTGGTCGACGAGGCGCCCAAGGTGCTGCGGGTCAGCTGGTGCACGGTGTTGCGCAGCGCCGGCGGCGAGC
TGCACCGCCTGGCCGGCAGTTCGGGCGCTCCGGAGACCAAGGCGGATTCGGCTCCCTGGCTGCCGCTGGAGCGGGCGATG
ACGCTGGACAGCAGCGGGGACTGGGTGCCTAAGGCGTGGCGCGATATGGACATGACGATGGTCGCGGCGCCGCTGGGTGA
CCCGCACACCGCGGTGGTGCTGGGCCGGCCGGGCCCGGAATTCCGGCCGTCGGAGGTCGCCCGGCTGGGCTATCTGGCCG
GGATCGTGGCCACGATGCTGCGCTGA

Upstream 100 bases:

>100_bases
CGCCGCGTCCGCCGCGCTGGCGTGACGTTCGGCGGCCACCGCCACGCTGGCGTTACGCCCGGTTACGCCCGGCGGGCAGA
ACACCCCGGGCTGTGCAACA

Downstream 100 bases:

>100_bases
TTCCCGCGTGTGCCCGAATGATGTTGCGCTACTTAGGTTTTACTCGCCGCCACCACATTGGCCCTCGGCAGACGCCTTTT
CAGGGCGGCGACCCGCAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MLAVPSYLLRIELLDRPGSLGSLAVALGSVGADILSLDVVDRSSGYAIDDLVIELPAGAMPDTLITAAESLSGVRVDSVR
PHTGLLEAHRELELLDHVAAADDKTARLQVLVDEAPKVLRVSWCTVLRSAGGELHRLAGSSGAPETKADSAPWLPLERAM
TLDSSGDWVPKAWRDMDMTMVAAPLGDPHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR

Sequences:

>Translated_221_residues
MLAVPSYLLRIELLDRPGSLGSLAVALGSVGADILSLDVVDRSSGYAIDDLVIELPAGAMPDTLITAAESLSGVRVDSVR
PHTGLLEAHRELELLDHVAAADDKTARLQVLVDEAPKVLRVSWCTVLRSAGGELHRLAGSSGAPETKADSAPWLPLERAM
TLDSSGDWVPKAWRDMDMTMVAAPLGDPHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR
>Mature_221_residues
MLAVPSYLLRIELLDRPGSLGSLAVALGSVGADILSLDVVDRSSGYAIDDLVIELPAGAMPDTLITAAESLSGVRVDSVR
PHTGLLEAHRELELLDHVAAADDKTARLQVLVDEAPKVLRVSWCTVLRSAGGELHRLAGSSGAPETKADSAPWLPLERAM
TLDSSGDWVPKAWRDMDMTMVAAPLGDPHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23415; Mature: 23415

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAVPSYLLRIELLDRPGSLGSLAVALGSVGADILSLDVVDRSSGYAIDDLVIELPAGAM
CCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHEEEECCCCCC
PDTLITAAESLSGVRVDSVRPHTGLLEAHRELELLDHVAAADDKTARLQVLVDEAPKVLR
CHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHH
VSWCTVLRSAGGELHRLAGSSGAPETKADSAPWLPLERAMTLDSSGDWVPKAWRDMDMTM
HHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCHHHHEEECCCCCCCCHHHCCCCEEE
VAAPLGDPHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR
EEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLAVPSYLLRIELLDRPGSLGSLAVALGSVGADILSLDVVDRSSGYAIDDLVIELPAGAM
CCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHEEEECCCCCC
PDTLITAAESLSGVRVDSVRPHTGLLEAHRELELLDHVAAADDKTARLQVLVDEAPKVLR
CHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHH
VSWCTVLRSAGGELHRLAGSSGAPETKADSAPWLPLERAMTLDSSGDWVPKAWRDMDMTM
HHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCHHHHEEECCCCCCCCHHHCCCCEEE
VAAPLGDPHTAVVLGRPGPEFRPSEVARLGYLAGIVATMLR
EEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA