| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409149
Identifier: 41409149
GI number: 41409149
Start: 3394406
End: 3394924
Strand: Direct
Name: 41409149
Synonym: MAP3051
Alternate gene names: NA
Gene position: 3394406-3394924 (Clockwise)
Preceding gene: 41409145
Following gene: 41409154
Centisome position: 70.28
GC content: 73.41
Gene sequence:
>519_bases ATGCTGCCCACCCCGATTTCAGCGACGGACCTGAACATCTACGGCGACGCGGAGCTGCCATGGAGCCGGGTCCTCGAGGC GATGCGGGCCCTGCCCTCCCCCGAGACGCCGCAGTTCCTCGGCACGGTGCGACCCGACGGCAGTCCGCACGCGGCCGGCG TCGGCTCGATCGAGCATGCCGGCAACATCTATTTCACCAGCGGGCCGGCGACGCTGAAGTCCCGCAACCTGGCCGCCAAT CCGGCCTGCACCCTGTCGGTGCGGCTGCCCGGGGTCGACCTGATCCTGCAGGGCGACGCGCACCGCACCACCGACGCCGG TGAGCTCGACGCGGTCACCGCGCTGTTCCGCGACGCCGGCTGGCCCTGCGAGCGCGACGGCGACGCCGTCGTGGCCCCCT ACGGCGCCCAGAGCGCCGGGCCGCCGCCGTGGCATCTGTACCGATTCGTGCTGCGCGCCGCGGTCGGGGTCGCGCTCACC GAACCGCACGGCGCGACGCGCTGGGCATTCTCCCCGTAG
Upstream 100 bases:
>100_bases GTACTGTACAAGAGGGGCGCGGCGGCAGTGGCGGGCGATGAATTCCAGTGCCGCCCCGGGTCGATAGCTGTATCCGCCCG GCCAACTGCGAGGAGTATTG
Downstream 100 bases:
>100_bases CCGCGCCGGGTCAGCGCGCGGTCAGGCCGGGGATGAGGAACCCGTCGACCAGCGCCTGCACGGTGCGGCGACTGGGCGGC CGGGTGGGCACGATCGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MLPTPISATDLNIYGDAELPWSRVLEAMRALPSPETPQFLGTVRPDGSPHAAGVGSIEHAGNIYFTSGPATLKSRNLAAN PACTLSVRLPGVDLILQGDAHRTTDAGELDAVTALFRDAGWPCERDGDAVVAPYGAQSAGPPPWHLYRFVLRAAVGVALT EPHGATRWAFSP
Sequences:
>Translated_172_residues MLPTPISATDLNIYGDAELPWSRVLEAMRALPSPETPQFLGTVRPDGSPHAAGVGSIEHAGNIYFTSGPATLKSRNLAAN PACTLSVRLPGVDLILQGDAHRTTDAGELDAVTALFRDAGWPCERDGDAVVAPYGAQSAGPPPWHLYRFVLRAAVGVALT EPHGATRWAFSP >Mature_172_residues MLPTPISATDLNIYGDAELPWSRVLEAMRALPSPETPQFLGTVRPDGSPHAAGVGSIEHAGNIYFTSGPATLKSRNLAAN PACTLSVRLPGVDLILQGDAHRTTDAGELDAVTALFRDAGWPCERDGDAVVAPYGAQSAGPPPWHLYRFVLRAAVGVALT EPHGATRWAFSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18150; Mature: 18150
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPTPISATDLNIYGDAELPWSRVLEAMRALPSPETPQFLGTVRPDGSPHAAGVGSIEHA CCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCC GNIYFTSGPATLKSRNLAANPACTLSVRLPGVDLILQGDAHRTTDAGELDAVTALFRDAG CEEEEECCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHCC WPCERDGDAVVAPYGAQSAGPPPWHLYRFVLRAAVGVALTEPHGATRWAFSP CCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCEEEECCCCCCCCCCCC >Mature Secondary Structure MLPTPISATDLNIYGDAELPWSRVLEAMRALPSPETPQFLGTVRPDGSPHAAGVGSIEHA CCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCC GNIYFTSGPATLKSRNLAANPACTLSVRLPGVDLILQGDAHRTTDAGELDAVTALFRDAG CEEEEECCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHCC WPCERDGDAVVAPYGAQSAGPPPWHLYRFVLRAAVGVALTEPHGATRWAFSP CCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA