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The map label for this gene is gatC

Identifier: 41409144

GI number: 41409144

Start: 3389247

End: 3389543

Strand: Reverse

Name: gatC

Synonym: MAP3046c

Alternate gene names: 41409144

Gene position: 3389543-3389247 (Counterclockwise)

Preceding gene: 41409146

Following gene: 41409143

Centisome position: 70.18

GC content: 71.38

Gene sequence:

>297_bases
GTGTCCCAGATCTCCCGCGATGAGGTGGCGCACCTGGCCCGGCTGTCCCGGCTGGCGCTGACGGACGCCGAGCTCGACAG
CTTCGCCGGCCAGCTCGACGCCATCCTCACCCACGTCAGCCAGGTGCAGGCGGTCGACGTCACCGGCGTCGAACCGACCG
ACAACCCGCTGAAGGACCTCAACGTCACCCGCCCGGACGAGCCGATGCCCTGCCTGACGCAGGCCGAAGCGCTGGCCGAA
GCGCCCGAAGCCGTCGACGGCCGGTTCGCCGTCCCGCAGATCCTGGGGGACGAGTGA

Upstream 100 bases:

>100_bases
TGTTCTGCCCGCCGGGCGTAACCGGGCGTAACGCCAGCGTGGCGGTGGCCGCCGAACGTCACGCCAGCGCGGCGGACGCG
GCGGGCTAGGCTTTCCGATC

Downstream 100 bases:

>100_bases
ACGAGATCATCCGGTCGGACGCCGCGACGCTGGCCGCCCGCATCGCCGCCAAGGAGCTGTCCTCGGTCGAGGTCACCCAG
GCCTGCCTGGATCAGATCGC

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MSQISRDEVAHLARLSRLALTDAELDSFAGQLDAILTHVSQVQAVDVTGVEPTDNPLKDLNVTRPDEPMPCLTQAEALAE
APEAVDGRFAVPQILGDE

Sequences:

>Translated_98_residues
MSQISRDEVAHLARLSRLALTDAELDSFAGQLDAILTHVSQVQAVDVTGVEPTDNPLKDLNVTRPDEPMPCLTQAEALAE
APEAVDGRFAVPQILGDE
>Mature_97_residues
SQISRDEVAHLARLSRLALTDAELDSFAGQLDAILTHVSQVQAVDVTGVEPTDNPLKDLNVTRPDEPMPCLTQAEALAEA
PEAVDGRFAVPQILGDE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_MYCA1 (A0QJD5)

Other databases:

- EMBL:   CP000479
- RefSeq:   YP_883023.1
- ProteinModelPortal:   A0QJD5
- SMR:   A0QJD5
- STRING:   A0QJD5
- EnsemblBacteria:   EBMYCT00000011874
- GeneID:   4530532
- GenomeReviews:   CP000479_GR
- KEGG:   mav:MAV_3860
- TIGR:   MAV_3860
- eggNOG:   COG0721
- GeneTree:   EBGT00050000017278
- HOGENOM:   HBG586403
- OMA:   PTSHAVP
- ProtClustDB:   PRK00034
- BioCyc:   MAVI243243:MAV_3860-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10506; Mature: 10375

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQISRDEVAHLARLSRLALTDAELDSFAGQLDAILTHVSQVQAVDVTGVEPTDNPLKDL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
NVTRPDEPMPCLTQAEALAEAPEAVDGRFAVPQILGDE
CCCCCCCCCCHHHHHHHHHHCCHHCCCCCCCCHHCCCC
>Mature Secondary Structure 
SQISRDEVAHLARLSRLALTDAELDSFAGQLDAILTHVSQVQAVDVTGVEPTDNPLKDL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
NVTRPDEPMPCLTQAEALAEAPEAVDGRFAVPQILGDE
CCCCCCCCCCHHHHHHHHHHCCHHCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA