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The map label for this gene is garP [C]

Identifier: 41409129

GI number: 41409129

Start: 3371489

End: 3372793

Strand: Direct

Name: garP [C]

Synonym: MAP3031

Alternate gene names: 41409129

Gene position: 3371489-3372793 (Clockwise)

Preceding gene: 41409126

Following gene: 41409132

Centisome position: 69.81

GC content: 69.04

Gene sequence:

>1305_bases
ATGCAGACCGACCCCGTCGCCACGCCCGACGTCGGCGCCGGCACCCGCTGGTCGATCATGGTCGTTTCGCTGCTGGCGAC
GGCGAGTTCCTTCCTGTTCATCAACGGCGTCGCATTCTTGATCCCGTCGCTGCAAGGCGCGCGCGGGATTCGGCTCGACG
AAGCCGGTCTGCTGGCCTCGATGCCCAGCTGGGGAATGGTGGTCACGCTCGTGGCGTGGGGCTATGTGCTGGACCGGGTC
GGCGAGCGGGTGGTGATGACCACCGGCTCGGCGCTGACCGCACTGGCCGCCTACGCCGCGTCGTCGGCACACTCCATGGT
GCTGATCGCGGCGTACCTGTTTCTCGGCGGCATGGCGGCGGCCAGCTGCAACACGGCCGGCGGCCGACTGGTGTCGGCCT
GGTTCCCCCCGCACCAGCGCGGGCTGGCGATGGGCATCCGCCAAACCGCGCAACCGTTGGGAATCGCGTTGGGCGCCATG
GTCATTCCCGAGCTGGCCGAACACGGTCCGCAGGCGGGACTGCGCTTTACCGCGTTGGCATGCGTGTTCGGCGCGGTCGC
CAGCGTGATCGGTATCGTCGACCCGCCGCGCAAGCCCCGCGCCAGCGCCAGCGATCAGGAACTCGCCAGCCCGTATCGAG
GGTCGTTGACGCTGTGGCGAATTCACGCGGTGGCGGGCCTGATGATGATGCCGCAGACGGTGACGGTGACGTTCATGCTG
GTGTGGTTGATCCGGAACCTGCACTGGTCCGTCGCGGCCGCCGGCGCATTGGTGACGCTGTCCCAGCTGCTCGGCGCGCT
CGGCCGGGTCGCGGTGGGCCGCTGGTCGGACCGGCTCGGCTCGCGGATGCGGCCCGTCCGCTACATCGCGGCCGCGGCGG
TGCTGGTTCTGCTGCTGTTGGCCTGGGCCGACTACCTCAATTCGCGGTGGCAGGCCGGCCTGATGGTGGCCATCTCGGTG
ATCGCGGTGCTCGACAACGGGCTGGAAGCCACCGCGATCACCGAATTCGCCGGGCCGTATTGGAGTGGACGCGCCCTGGG
CATCCAGAACACCACCCAGCGGATGATGGCGGCCGCCGGTCCGCCGTTGTTCGGCGCGTTGATTTCGGCCGCGAAATATC
CACCGGCATGGCTGTTGTGCGCGTTGTTCCCCTTGGCGGCGATGCCGCTGGTGCCGACGCAGCTGCTGCCGCCCGGCTTG
GAAACTAGAGCGCGGCGGCAATCCGTTCGCCGACTTCGGTGGTGGCGGGCCGTTCGTTCCCACGCGTTGCCAGATATCGT
TCGACGGCCCGGTCAACCCGGGTAG

Upstream 100 bases:

>100_bases
GGCGTAGCCGGGCGTGGCGGGCCGTCGATCCCAAGCACCGATGACCGGCAACGGCACACGTCCTACCCCTAAATATCCCG
GCGGTATGCAAGCATGGGGA

Downstream 100 bases:

>100_bases
CGGCGGCGTCCTCGCCGAGGTGGGCGAGCAGCAGCGCCACCGACATGATCGCGGCCGTGGGATCGGCGATGCCTTGGCCG
GCGATGTCGGGCGCGCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MQTDPVATPDVGAGTRWSIMVVSLLATASSFLFINGVAFLIPSLQGARGIRLDEAGLLASMPSWGMVVTLVAWGYVLDRV
GERVVMTTGSALTALAAYAASSAHSMVLIAAYLFLGGMAAASCNTAGGRLVSAWFPPHQRGLAMGIRQTAQPLGIALGAM
VIPELAEHGPQAGLRFTALACVFGAVASVIGIVDPPRKPRASASDQELASPYRGSLTLWRIHAVAGLMMMPQTVTVTFML
VWLIRNLHWSVAAAGALVTLSQLLGALGRVAVGRWSDRLGSRMRPVRYIAAAAVLVLLLLAWADYLNSRWQAGLMVAISV
IAVLDNGLEATAITEFAGPYWSGRALGIQNTTQRMMAAAGPPLFGALISAAKYPPAWLLCALFPLAAMPLVPTQLLPPGL
ETRARRQSVRRLRWWRAVRSHALPDIVRRPGQPG

Sequences:

>Translated_434_residues
MQTDPVATPDVGAGTRWSIMVVSLLATASSFLFINGVAFLIPSLQGARGIRLDEAGLLASMPSWGMVVTLVAWGYVLDRV
GERVVMTTGSALTALAAYAASSAHSMVLIAAYLFLGGMAAASCNTAGGRLVSAWFPPHQRGLAMGIRQTAQPLGIALGAM
VIPELAEHGPQAGLRFTALACVFGAVASVIGIVDPPRKPRASASDQELASPYRGSLTLWRIHAVAGLMMMPQTVTVTFML
VWLIRNLHWSVAAAGALVTLSQLLGALGRVAVGRWSDRLGSRMRPVRYIAAAAVLVLLLLAWADYLNSRWQAGLMVAISV
IAVLDNGLEATAITEFAGPYWSGRALGIQNTTQRMMAAAGPPLFGALISAAKYPPAWLLCALFPLAAMPLVPTQLLPPGL
ETRARRQSVRRLRWWRAVRSHALPDIVRRPGQPG
>Mature_434_residues
MQTDPVATPDVGAGTRWSIMVVSLLATASSFLFINGVAFLIPSLQGARGIRLDEAGLLASMPSWGMVVTLVAWGYVLDRV
GERVVMTTGSALTALAAYAASSAHSMVLIAAYLFLGGMAAASCNTAGGRLVSAWFPPHQRGLAMGIRQTAQPLGIALGAM
VIPELAEHGPQAGLRFTALACVFGAVASVIGIVDPPRKPRASASDQELASPYRGSLTLWRIHAVAGLMMMPQTVTVTFML
VWLIRNLHWSVAAAGALVTLSQLLGALGRVAVGRWSDRLGSRMRPVRYIAAAAVLVLLLLAWADYLNSRWQAGLMVAISV
IAVLDNGLEATAITEFAGPYWSGRALGIQNTTQRMMAAAGPPLFGALISAAKYPPAWLLCALFPLAAMPLVPTQLLPPGL
ETRARRQSVRRLRWWRAVRSHALPDIVRRPGQPG

Specific function: Uptake Of D-Galactarate. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46095; Mature: 46095

Theoretical pI: Translated: 11.58; Mature: 11.58

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTDPVATPDVGAGTRWSIMVVSLLATASSFLFINGVAFLIPSLQGARGIRLDEAGLLAS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHC
MPSWGMVVTLVAWGYVLDRVGERVVMTTGSALTALAAYAASSAHSMVLIAAYLFLGGMAA
CCCCHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
ASCNTAGGRLVSAWFPPHQRGLAMGIRQTAQPLGIALGAMVIPELAEHGPQAGLRFTALA
HCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
CVFGAVASVIGIVDPPRKPRASASDQELASPYRGSLTLWRIHAVAGLMMMPQTVTVTFML
HHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
VWLIRNLHWSVAAAGALVTLSQLLGALGRVAVGRWSDRLGSRMRPVRYIAAAAVLVLLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
AWADYLNSRWQAGLMVAISVIAVLDNGLEATAITEFAGPYWSGRALGIQNTTQRMMAAAG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEECCCHHHHHHHHHCC
PPLFGALISAAKYPPAWLLCALFPLAAMPLVPTQLLPPGLETRARRQSVRRLRWWRAVRS
CHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH
HALPDIVRRPGQPG
HCCHHHHHCCCCCC
>Mature Secondary Structure
MQTDPVATPDVGAGTRWSIMVVSLLATASSFLFINGVAFLIPSLQGARGIRLDEAGLLAS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHC
MPSWGMVVTLVAWGYVLDRVGERVVMTTGSALTALAAYAASSAHSMVLIAAYLFLGGMAA
CCCCHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
ASCNTAGGRLVSAWFPPHQRGLAMGIRQTAQPLGIALGAMVIPELAEHGPQAGLRFTALA
HCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
CVFGAVASVIGIVDPPRKPRASASDQELASPYRGSLTLWRIHAVAGLMMMPQTVTVTFML
HHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
VWLIRNLHWSVAAAGALVTLSQLLGALGRVAVGRWSDRLGSRMRPVRYIAAAAVLVLLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
AWADYLNSRWQAGLMVAISVIAVLDNGLEATAITEFAGPYWSGRALGIQNTTQRMMAAAG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEECCCHHHHHHHHHCC
PPLFGALISAAKYPPAWLLCALFPLAAMPLVPTQLLPPGLETRARRQSVRRLRWWRAVRS
CHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH
HALPDIVRRPGQPG
HCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]