Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409126

Identifier: 41409126

GI number: 41409126

Start: 3368168

End: 3368680

Strand: Direct

Name: 41409126

Synonym: MAP3028

Alternate gene names: NA

Gene position: 3368168-3368680 (Clockwise)

Preceding gene: 41409125

Following gene: 41409129

Centisome position: 69.74

GC content: 66.47

Gene sequence:

>513_bases
ATGGGAACCAATCAGCGCGCGAGCATCGTCATGTCCGACGACGAGATCGCCGACTTCGTCGTCAAGAGCCGCACCGGCAC
GCTGGCCACCATCGGCCGGGACGGGCAGCCTCATCTGACCGCCATGTGGTACGCCGTCGTCGACGGCGAGATCTGGCTGG
AGACCAAGGCCAAGTCGCAGAAGGCCATCAACCTCAAGCGCGACCCGCGGGTGAGCTTCCTCATCGAGGACGGCGACACC
TACGACACCCTGCGCGGCGTGTCGTTCGAAGGGGTGGCGGAACTCGTCGACGATCCCGACGTCGCCCACCGGGTGGGGGT
CAGCGTCTTCGAGCGCTACACCGGTCCCTACACCGACGAGATGAAGCCGTTCGTTGAGCAGATGATGAACAAGCGGGTCT
GTGTTCGCATCGTGGCCCGCCGGGCGCGTTCCTGGGATCACCGCAAACTCGGCTTGCCGCCCATGCCGGTGGGTGGATCG
ACGGCGCCGGCGGTGCTGGGCACCGACCGGTGA

Upstream 100 bases:

>100_bases
TTTCTCGCGAGCAGACACAAAAGTCCCCTTTTCGGACGACTTTCGCGTGCTTTTGCGTCTGCTCGCGAGGGGACACAGCG
GACCTGACAGACTGACCGGC

Downstream 100 bases:

>100_bases
CCGCGGTCTTGGTTTTGTAGCCCCGATGGGATTCGAACCCACGCTACCGCCGTGAGAGGGCGGCGTCCTAGGCCGCTAGA
CGACGGGGCCAGACACGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MGTNQRASIVMSDDEIADFVVKSRTGTLATIGRDGQPHLTAMWYAVVDGEIWLETKAKSQKAINLKRDPRVSFLIEDGDT
YDTLRGVSFEGVAELVDDPDVAHRVGVSVFERYTGPYTDEMKPFVEQMMNKRVCVRIVARRARSWDHRKLGLPPMPVGGS
TAPAVLGTDR

Sequences:

>Translated_170_residues
MGTNQRASIVMSDDEIADFVVKSRTGTLATIGRDGQPHLTAMWYAVVDGEIWLETKAKSQKAINLKRDPRVSFLIEDGDT
YDTLRGVSFEGVAELVDDPDVAHRVGVSVFERYTGPYTDEMKPFVEQMMNKRVCVRIVARRARSWDHRKLGLPPMPVGGS
TAPAVLGTDR
>Mature_169_residues
GTNQRASIVMSDDEIADFVVKSRTGTLATIGRDGQPHLTAMWYAVVDGEIWLETKAKSQKAINLKRDPRVSFLIEDGDTY
DTLRGVSFEGVAELVDDPDVAHRVGVSVFERYTGPYTDEMKPFVEQMMNKRVCVRIVARRARSWDHRKLGLPPMPVGGST
APAVLGTDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18911; Mature: 18780

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTNQRASIVMSDDEIADFVVKSRTGTLATIGRDGQPHLTAMWYAVVDGEIWLETKAKSQ
CCCCCCEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEEEECCEEEEEECCCCC
KAINLKRDPRVSFLIEDGDTYDTLRGVSFEGVAELVDDPDVAHRVGVSVFERYTGPYTDE
CEECCCCCCCEEEEEECCCCHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHH
MKPFVEQMMNKRVCVRIVARRARSWDHRKLGLPPMPVGGSTAPAVLGTDR
HHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCC
>Mature Secondary Structure 
GTNQRASIVMSDDEIADFVVKSRTGTLATIGRDGQPHLTAMWYAVVDGEIWLETKAKSQ
CCCCCEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEEEECCEEEEEECCCCC
KAINLKRDPRVSFLIEDGDTYDTLRGVSFEGVAELVDDPDVAHRVGVSVFERYTGPYTDE
CEECCCCCCCEEEEEECCCCHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHH
MKPFVEQMMNKRVCVRIVARRARSWDHRKLGLPPMPVGGSTAPAVLGTDR
HHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA