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The map label for this gene is fdhD

Identifier: 41409064

GI number: 41409064

Start: 3301833

End: 3302651

Strand: Reverse

Name: fdhD

Synonym: MAP2966c

Alternate gene names: 41409064

Gene position: 3302651-3301833 (Counterclockwise)

Preceding gene: 41409065

Following gene: 41409063

Centisome position: 68.38

GC content: 70.45

Gene sequence:

>819_bases
GTGCAGGTAACGTCGCGCCGGCGGGTCACGCATCTGACCGCCGGGCAGGCGATCGCCCGACCGGAGACTCTGGTCGTCGA
GGAGCCGTTGGAGATCCGGGTGGGCGGCGCCGCGGTCACCGTGACGATGCGCACGCCGGGCTCGGATTTCGAACTGGCCC
AAGGCTTTCTGCTGACCGAGGGCATCATCGGGGCCCGCGAGGACGTGCACAGCATCCGCTACTGCGCCGGGTGCGGCGAG
GACGGCGCGAACAGCTACAACGTGCTGGACGTCACGCTGGCGGCCGGCCTCGGCCGCCCCGAGCTCGACGTCACCCGCAA
CTTCTACACCACCTCCTCGTGCGGGGTGTGCGGCAAGGCGTCGCTCGAGGCGGTGCGATCGGTCAGCCGGTTTTCGCCGG
CCGCCGACCCCGCCACCGTCGCGGCCGCCACCCTGCAGGCGATGCCACACCAATTGCGTTCGGCGCAAAAGGTTTTCGAC
AGCACCGGGGGTCTGCATGCCGCCGCGCTGTTCCGCGCCGACGGCACCATGCTGGTGGTGCGCGAGGACGTCGGTCGGCA
CAACGCGGTCGACAAGGTGATCGGCTGGGCGCTGGAGCAGCAGCGGCTGCCACTGCGCGCCACGGTGTTGCTGGTCAGCG
GGCGGGCGTCGTTCGAGCTGGCCCAGAAGACGGTGATGGCCGGCATCCCGGTGCTGGCGGCGGTGTCCGCGCCGTCGTCA
CTGGCGGTGTCGCTGGCCGAGGAGTCCGGAGTCACGTTGGTGGCCTTTCTGCGGGAGGACTCGATGAACATCTACACCCG
GGCCGACCGGATCGGCTGA

Upstream 100 bases:

>100_bases
ACACCTCGGCGCAGGCGCTGGCGGCGCTGGCGTCGGCGGTGTGATCGGCTCGTGGGTCTCCCGCGGCTCGCTGACCCACC
GGTCGCGGTAGTTTGAGGCG

Downstream 100 bases:

>100_bases
ACCGCACCGGTGGCACGGCGTGGCTGTGGATGCGCGCCGCACTGGGGATAACCGGCCGGTGCGGGCGGCCGCGCCCGGCG
GCCCGGCCTCGCCCGTCGGC

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MQVTSRRRVTHLTAGQAIARPETLVVEEPLEIRVGGAAVTVTMRTPGSDFELAQGFLLTEGIIGAREDVHSIRYCAGCGE
DGANSYNVLDVTLAAGLGRPELDVTRNFYTTSSCGVCGKASLEAVRSVSRFSPAADPATVAAATLQAMPHQLRSAQKVFD
STGGLHAAALFRADGTMLVVREDVGRHNAVDKVIGWALEQQRLPLRATVLLVSGRASFELAQKTVMAGIPVLAAVSAPSS
LAVSLAEESGVTLVAFLREDSMNIYTRADRIG

Sequences:

>Translated_272_residues
MQVTSRRRVTHLTAGQAIARPETLVVEEPLEIRVGGAAVTVTMRTPGSDFELAQGFLLTEGIIGAREDVHSIRYCAGCGE
DGANSYNVLDVTLAAGLGRPELDVTRNFYTTSSCGVCGKASLEAVRSVSRFSPAADPATVAAATLQAMPHQLRSAQKVFD
STGGLHAAALFRADGTMLVVREDVGRHNAVDKVIGWALEQQRLPLRATVLLVSGRASFELAQKTVMAGIPVLAAVSAPSS
LAVSLAEESGVTLVAFLREDSMNIYTRADRIG
>Mature_272_residues
MQVTSRRRVTHLTAGQAIARPETLVVEEPLEIRVGGAAVTVTMRTPGSDFELAQGFLLTEGIIGAREDVHSIRYCAGCGE
DGANSYNVLDVTLAAGLGRPELDVTRNFYTTSSCGVCGKASLEAVRSVSRFSPAADPATVAAATLQAMPHQLRSAQKVFD
STGGLHAAALFRADGTMLVVREDVGRHNAVDKVIGWALEQQRLPLRATVLLVSGRASFELAQKTVMAGIPVLAAVSAPSS
LAVSLAEESGVTLVAFLREDSMNIYTRADRIG

Specific function: Necessary for formate dehydrogenase activity

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family

Homologues:

Organism=Escherichia coli, GI1790329, Length=257, Percent_Identity=32.295719844358, Blast_Score=102, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FDHD_MYCPA (Q73VP7)

Other databases:

- EMBL:   AE016958
- RefSeq:   NP_961900.1
- ProteinModelPortal:   Q73VP7
- SMR:   Q73VP7
- EnsemblBacteria:   EBMYCT00000036247
- GeneID:   2721270
- GenomeReviews:   AE016958_GR
- KEGG:   mpa:MAP2966c
- NMPDR:   fig|262316.1.peg.2966
- GeneTree:   EBGT00050000017150
- HOGENOM:   HBG732883
- OMA:   GRAHTAN
- ProtClustDB:   PRK00724
- GO:   GO:0005737
- HAMAP:   MF_00187
- InterPro:   IPR003786
- TIGRFAMs:   TIGR00129

Pfam domain/function: PF02634 FdhD-NarQ

EC number: NA

Molecular weight: Translated: 28736; Mature: 28736

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVTSRRRVTHLTAGQAIARPETLVVEEPLEIRVGGAAVTVTMRTPGSDFELAQGFLLTE
CCCCCCCCEEEEECCCHHCCCCEEEEECCCEEEECCEEEEEEEECCCCCHHHHCCEEECC
GIIGAREDVHSIRYCAGCGEDGANSYNVLDVTLAAGLGRPELDVTRNFYTTSSCGVCGKA
CCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEECCEEECCCCCCCCHH
SLEAVRSVSRFSPAADPATVAAATLQAMPHQLRSAQKVFDSTGGLHAAALFRADGTMLVV
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEE
REDVGRHNAVDKVIGWALEQQRLPLRATVLLVSGRASFELAQKTVMAGIPVLAAVSAPSS
ECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCH
LAVSLAEESGVTLVAFLREDSMNIYTRADRIG
HEEEECCCCCCEEEEEEECCCCEEEECCCCCC
>Mature Secondary Structure
MQVTSRRRVTHLTAGQAIARPETLVVEEPLEIRVGGAAVTVTMRTPGSDFELAQGFLLTE
CCCCCCCCEEEEECCCHHCCCCEEEEECCCEEEECCEEEEEEEECCCCCHHHHCCEEECC
GIIGAREDVHSIRYCAGCGEDGANSYNVLDVTLAAGLGRPELDVTRNFYTTSSCGVCGKA
CCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEECCEEECCCCCCCCHH
SLEAVRSVSRFSPAADPATVAAATLQAMPHQLRSAQKVFDSTGGLHAAALFRADGTMLVV
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEE
REDVGRHNAVDKVIGWALEQQRLPLRATVLLVSGRASFELAQKTVMAGIPVLAAVSAPSS
ECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCH
LAVSLAEESGVTLVAFLREDSMNIYTRADRIG
HEEEECCCCCCEEEEEEECCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA