Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409065

Identifier: 41409065

GI number: 41409065

Start: 3302708

End: 3303697

Strand: Reverse

Name: 41409065

Synonym: MAP2967c

Alternate gene names: NA

Gene position: 3303697-3302708 (Counterclockwise)

Preceding gene: 41409067

Following gene: 41409064

Centisome position: 68.4

GC content: 73.03

Gene sequence:

>990_bases
GTGGGTGTGACCGTCGCGGTGACCGGACCGACGGGGGAGATCGGCCGCTCCGCGGTGACGGCACTGGAGCGCGAACCGGG
CGTGGACGCGATCATCGGGATGGCTCGCCGGCCGTTCTCCCCGTCCTCGCGCGGCTGGCAGAAGACCACCTACCAGCAGG
GCGACATCCTGGACCGGGAGGCCGTCGACGCGGTGGTCGCGCAGGCCGACGTGGTGATCCACCTGGCCTTCATCATCATG
GGTTCGCGCGACGAGAGCGCCCGCGTCAACCTGCAGGGCACCCGCAACGTCTTCGAGGCAACGGTGGCGGCCGGGCGGCC
GCGGCGCCTGGTGTACACGTCGTCGGTGGCGGCCTACGGCTACCACTCCGACAACCCCGTCCCGCTGACCGAGGACGTGC
CGGCGCGCGGGTCCGCCGAGCATTACTACTCCGCGCAGAAGGCCGCGTCCGAGGCGATGCTCGCCGAGATCACCAAGGAT
TCGCCGCTGGAGGTGTTCGTGCTGCGGCCCTGCATCGTGGCCGGGCCGGGCGCGACCGCGCTGGCCGACGCGATGCCGTG
GAACCAGCTGCCCGGCCCGCTGCGCGCCATCGTCAAAGCGGTGCAGGCGATCCCGGTGCTCAAGCCGGTGGTGCCGGACC
CCGGTTATCCGCTGCAGTTGGTCCACCACGACGACGTGGCGTCGGCCATCGCGCTGGCCGCCACCGCGCCGGCGCCCCCG
GGGGCGTACAACATCGCCGGCGACGGGGTGGTGACGGTGGCCGACGTGGCCAAGGCGCTGGGCGGGCGGCCGGTGCGGGT
GCCGGCCGTGGCGGCGACGGCGGCCTCGGCGGCGATATCCAAGGCGCCGCTGGTGCCCTCGATGCTGGAATGGCTGCACA
CCGCGCGCACGTCGATGGTGATGGACACCACCAAGGCCAAAACCCAACTGGGCTGGCGGCCCGTGCACACCTCGGCGCAG
GCGCTGGCGGCGCTGGCGTCGGCGGTGTGA

Upstream 100 bases:

>100_bases
ATGATGGTTCTACCACGCGCCGAGCGGGCGTGCGCGACGCCGGCCTCGCACGGTTTCGGCCGGCCGCCGGGGGGAAGGAC
GTCTGAATGGGGGTGACCGA

Downstream 100 bases:

>100_bases
TCGGCTCGTGGGTCTCCCGCGGCTCGCTGACCCACCGGTCGCGGTAGTTTGAGGCGGTGCAGGTAACGTCGCGCCGGCGG
GTCACGCATCTGACCGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MGVTVAVTGPTGEIGRSAVTALEREPGVDAIIGMARRPFSPSSRGWQKTTYQQGDILDREAVDAVVAQADVVIHLAFIIM
GSRDESARVNLQGTRNVFEATVAAGRPRRLVYTSSVAAYGYHSDNPVPLTEDVPARGSAEHYYSAQKAASEAMLAEITKD
SPLEVFVLRPCIVAGPGATALADAMPWNQLPGPLRAIVKAVQAIPVLKPVVPDPGYPLQLVHHDDVASAIALAATAPAPP
GAYNIAGDGVVTVADVAKALGGRPVRVPAVAATAASAAISKAPLVPSMLEWLHTARTSMVMDTTKAKTQLGWRPVHTSAQ
ALAALASAV

Sequences:

>Translated_329_residues
MGVTVAVTGPTGEIGRSAVTALEREPGVDAIIGMARRPFSPSSRGWQKTTYQQGDILDREAVDAVVAQADVVIHLAFIIM
GSRDESARVNLQGTRNVFEATVAAGRPRRLVYTSSVAAYGYHSDNPVPLTEDVPARGSAEHYYSAQKAASEAMLAEITKD
SPLEVFVLRPCIVAGPGATALADAMPWNQLPGPLRAIVKAVQAIPVLKPVVPDPGYPLQLVHHDDVASAIALAATAPAPP
GAYNIAGDGVVTVADVAKALGGRPVRVPAVAATAASAAISKAPLVPSMLEWLHTARTSMVMDTTKAKTQLGWRPVHTSAQ
ALAALASAV
>Mature_328_residues
GVTVAVTGPTGEIGRSAVTALEREPGVDAIIGMARRPFSPSSRGWQKTTYQQGDILDREAVDAVVAQADVVIHLAFIIMG
SRDESARVNLQGTRNVFEATVAAGRPRRLVYTSSVAAYGYHSDNPVPLTEDVPARGSAEHYYSAQKAASEAMLAEITKDS
PLEVFVLRPCIVAGPGATALADAMPWNQLPGPLRAIVKAVQAIPVLKPVVPDPGYPLQLVHHDDVASAIALAATAPAPPG
AYNIAGDGVVTVADVAKALGGRPVRVPAVAATAASAAISKAPLVPSMLEWLHTARTSMVMDTTKAKTQLGWRPVHTSAQA
LAALASAV

Specific function: Putative nucleotide sugar epimerase/dehydrogenase [H]

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 34208; Mature: 34077

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVTVAVTGPTGEIGRSAVTALEREPGVDAIIGMARRPFSPSSRGWQKTTYQQGDILDRE
CCEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH
AVDAVVAQADVVIHLAFIIMGSRDESARVNLQGTRNVFEATVAAGRPRRLVYTSSVAAYG
HHHHHHHHHHHHHEEEEHHCCCCCCCCEEEECCHHHHHHHHHHCCCCCEEEEECCEEEEC
YHSDNPVPLTEDVPARGSAEHYYSAQKAASEAMLAEITKDSPLEVFVLRPCIVAGPGATA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEECCCHHH
LADAMPWNQLPGPLRAIVKAVQAIPVLKPVVPDPGYPLQLVHHDDVASAIALAATAPAPP
HHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCC
GAYNIAGDGVVTVADVAKALGGRPVRVPAVAATAASAAISKAPLVPSMLEWLHTARTSMV
CCEEECCCCEEEHHHHHHHHCCCCEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
MDTTKAKTQLGWRPVHTSAQALAALASAV
HCCHHHHHHCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
GVTVAVTGPTGEIGRSAVTALEREPGVDAIIGMARRPFSPSSRGWQKTTYQQGDILDRE
CEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH
AVDAVVAQADVVIHLAFIIMGSRDESARVNLQGTRNVFEATVAAGRPRRLVYTSSVAAYG
HHHHHHHHHHHHHEEEEHHCCCCCCCCEEEECCHHHHHHHHHHCCCCCEEEEECCEEEEC
YHSDNPVPLTEDVPARGSAEHYYSAQKAASEAMLAEITKDSPLEVFVLRPCIVAGPGATA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEECCCHHH
LADAMPWNQLPGPLRAIVKAVQAIPVLKPVVPDPGYPLQLVHHDDVASAIALAATAPAPP
HHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCC
GAYNIAGDGVVTVADVAKALGGRPVRVPAVAATAASAAISKAPLVPSMLEWLHTARTSMV
CCEEECCCCEEEHHHHHHHHCCCCEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
MDTTKAKTQLGWRPVHTSAQALAALASAV
HCCHHHHHHCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]