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The map label for this gene is tsf

Identifier: 41409053

GI number: 41409053

Start: 3288731

End: 3289558

Strand: Reverse

Name: tsf

Synonym: MAP2955c

Alternate gene names: 41409053

Gene position: 3289558-3288731 (Counterclockwise)

Preceding gene: 41409054

Following gene: 41409052

Centisome position: 68.11

GC content: 70.29

Gene sequence:

>828_bases
TTGGCCAACTTCACCGCTGCCGACGTCAAGCGGCTTCGGGAACTCACCGGTGCCGGCATGCTCGACTGCAAGAACGCCCT
GGCCGAATCCGACGGCGACTTCGACAAGGCGGTCGAGGCGCTGCGGATCAAGGGCGCCAAGGACGTCGGCAAGCGCGCCG
AGCGGGCGACGGCCGAGGGCCTGGTGGCCGCCCAGGGCGGCGCGCTGATCGAGCTGAACAGCGAGACCGACTTCGTCGCC
AAGAACGCCGAATTCCAGGCGCTTGCCGACCAGATCGTGGCGGCGGCCGCGTCCTCGAAGGCCGCCGACGTCGACGCGCT
GAAAGCCGCGAAAATCGGTGACACGACCGTCGAGCAGGCGATCGCCGAGCTGTCGGCCAAGATCGGCGAGAAGCTGGAGC
TGCGCCGCGTCGCGCACTTCGACGGCACCGTCGAGGCCTACCTGCACCGGCGGGCGGCCGACCTGCCGCCCGCGGTCGGC
GTGCTGGTCGAGTACCAGGGCTCGGGCAAAGACAGCGACAAAGAGGCCGCCCACGCGGTCGCGCTGCAGATCGCCGCGCT
CAAGGCCCGCTACCTGTCCCGCGGCGACGTGCCCGAGGACGTGGTGGCCAGCGAGCGCCGCATCGCCGAGGAGACGGCCA
AGGCGGAGGGCAAGCCGGAGCAGGCGCTGCCCAAGATCGTCGAGGGCCGGTTGAACGGCTTCTTCAAGGACGCCGTGCTG
CTCGAGCAGCCGTCGGTGTCCGACAGCAAGAAGACCGTCAAGGCGCTGCTCGACGAGGCCGGCGTGACGGTCACCCGGTT
CGTGCGCTTCGAGGTCGGCCAGGCCTGA

Upstream 100 bases:

>100_bases
TGGGAGCAGGAGCTGCTCGCCTCGGCCACTGCGACAGCCGCCCCCACCGAAGCGGGCGCACCCGAACCCACCACCGACCC
CTCCTAAGGAAGGCTGACCA

Downstream 100 bases:

>100_bases
CCGGTCGCGCGCAGCGGCACAAAACCTGCCGACGGCGTGCCCGCGCGGGTTAGCGTCGGTGCATGCGACACGTGCACGCG
TTCGGCGACGACGCCCTCGG

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts [H]

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MANFTAADVKRLRELTGAGMLDCKNALAESDGDFDKAVEALRIKGAKDVGKRAERATAEGLVAAQGGALIELNSETDFVA
KNAEFQALADQIVAAAASSKAADVDALKAAKIGDTTVEQAIAELSAKIGEKLELRRVAHFDGTVEAYLHRRAADLPPAVG
VLVEYQGSGKDSDKEAAHAVALQIAALKARYLSRGDVPEDVVASERRIAEETAKAEGKPEQALPKIVEGRLNGFFKDAVL
LEQPSVSDSKKTVKALLDEAGVTVTRFVRFEVGQA

Sequences:

>Translated_275_residues
MANFTAADVKRLRELTGAGMLDCKNALAESDGDFDKAVEALRIKGAKDVGKRAERATAEGLVAAQGGALIELNSETDFVA
KNAEFQALADQIVAAAASSKAADVDALKAAKIGDTTVEQAIAELSAKIGEKLELRRVAHFDGTVEAYLHRRAADLPPAVG
VLVEYQGSGKDSDKEAAHAVALQIAALKARYLSRGDVPEDVVASERRIAEETAKAEGKPEQALPKIVEGRLNGFFKDAVL
LEQPSVSDSKKTVKALLDEAGVTVTRFVRFEVGQA
>Mature_274_residues
ANFTAADVKRLRELTGAGMLDCKNALAESDGDFDKAVEALRIKGAKDVGKRAERATAEGLVAAQGGALIELNSETDFVAK
NAEFQALADQIVAAAASSKAADVDALKAAKIGDTTVEQAIAELSAKIGEKLELRRVAHFDGTVEAYLHRRAADLPPAVGV
LVEYQGSGKDSDKEAAHAVALQIAALKARYLSRGDVPEDVVASERRIAEETAKAEGKPEQALPKIVEGRLNGFFKDAVLL
EQPSVSDSKKTVKALLDEAGVTVTRFVRFEVGQA

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome [H]

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family [H]

Homologues:

Organism=Escherichia coli, GI1786366, Length=279, Percent_Identity=40.5017921146953, Blast_Score=179, Evalue=2e-46,
Organism=Drosophila melanogaster, GI19921466, Length=296, Percent_Identity=25.6756756756757, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449 [H]

Pfam domain/function: PF00889 EF_TS; PF00627 UBA [H]

EC number: NA

Molecular weight: Translated: 29084; Mature: 28953

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS01126 EF_TS_1 ; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANFTAADVKRLRELTGAGMLDCKNALAESDGDFDKAVEALRIKGAKDVGKRAERATAEG
CCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHC
LVAAQGGALIELNSETDFVAKNAEFQALADQIVAAAASSKAADVDALKAAKIGDTTVEQA
EEEECCCEEEEECCCCCHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHH
IAELSAKIGEKLELRRVAHFDGTVEAYLHRRAADLPPAVGVLVEYQGSGKDSDKEAAHAV
HHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCCHHEEEEEECCCCCCCHHHHHHHH
ALQIAALKARYLSRGDVPEDVVASERRIAEETAKAEGKPEQALPKIVEGRLNGFFKDAVL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LEQPSVSDSKKTVKALLDEAGVTVTRFVRFEVGQA
CCCCCCCHHHHHHHHHHHHCCCHHHHHEEHHCCCC
>Mature Secondary Structure 
ANFTAADVKRLRELTGAGMLDCKNALAESDGDFDKAVEALRIKGAKDVGKRAERATAEG
CCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHC
LVAAQGGALIELNSETDFVAKNAEFQALADQIVAAAASSKAADVDALKAAKIGDTTVEQA
EEEECCCEEEEECCCCCHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHH
IAELSAKIGEKLELRRVAHFDGTVEAYLHRRAADLPPAVGVLVEYQGSGKDSDKEAAHAV
HHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCCHHEEEEEECCCCCCCHHHHHHHH
ALQIAALKARYLSRGDVPEDVVASERRIAEETAKAEGKPEQALPKIVEGRLNGFFKDAVL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LEQPSVSDSKKTVKALLDEAGVTVTRFVRFEVGQA
CCCCCCCHHHHHHHHHHHHCCCHHHHHEEHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA