| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409050
Identifier: 41409050
GI number: 41409050
Start: 3286298
End: 3286711
Strand: Reverse
Name: 41409050
Synonym: MAP2952c
Alternate gene names: NA
Gene position: 3286711-3286298 (Counterclockwise)
Preceding gene: 41409052
Following gene: 41409048
Centisome position: 68.05
GC content: 69.81
Gene sequence:
>414_bases ATGCCCAAGACGACCAAGGGCGGCGCGCCCAAGAAGGGCGAATTGCCCAGCACCCTGCAACGTTCCAGCGCCAAGGCGCA GCGGACGTTCGCCAAAGCCCATGACGCGGCCGCGCAGGAGTACGGCAGCGAGGAACGCGCGCACCGGGTGGCCTACTCGG CGGTCAAACACAGTTTCGAGAAGGTCGGCGACCACTGGGAGCCCAAGGCGAAGAAGGGTCCCTCCGACCAGCGGGCCCGC AGCGGTGGCCCGCGGGCGTCCGGTGCGTCGGCCGAGGGCGTCGACGCCAACGCGAGCAAGAAGCACCTGCTGGACGTGGC CCGCCGACTCGATGTCCGGGGCCGCTCGACGATGACCAAGTCCGAGTTGGTCGACGCGATCAAGAAGCACAACCGCCGGG CGCGGGCCCGCTGA
Upstream 100 bases:
>100_bases TCGCGGCGCCCCGGTGCGGGTGTTCGGCGGCGTGATTGCCGGCCCCGCAACGGGGTAACCGTCCGGCGGTAACCAGTCGG GTGGCACACAAGGAGGTCCG
Downstream 100 bases:
>100_bases CCGCACGCCAAACCAGCGGCGGCTCCGGTGTTTTCACCGGTTTAGCCGCCCGGCCGGTGGGCAACTTCAAGCGGCCCAAT GCCTTTGGCGCTAGAGGATG
Product: hypothetical protein
Products: NA
Alternate protein names: ChaB Protein; Cation Transport Regulator
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MPKTTKGGAPKKGELPSTLQRSSAKAQRTFAKAHDAAAQEYGSEERAHRVAYSAVKHSFEKVGDHWEPKAKKGPSDQRAR SGGPRASGASAEGVDANASKKHLLDVARRLDVRGRSTMTKSELVDAIKKHNRRARAR
Sequences:
>Translated_137_residues MPKTTKGGAPKKGELPSTLQRSSAKAQRTFAKAHDAAAQEYGSEERAHRVAYSAVKHSFEKVGDHWEPKAKKGPSDQRAR SGGPRASGASAEGVDANASKKHLLDVARRLDVRGRSTMTKSELVDAIKKHNRRARAR >Mature_136_residues PKTTKGGAPKKGELPSTLQRSSAKAQRTFAKAHDAAAQEYGSEERAHRVAYSAVKHSFEKVGDHWEPKAKKGPSDQRARS GGPRASGASAEGVDANASKKHLLDVARRLDVRGRSTMTKSELVDAIKKHNRRARAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14882; Mature: 14751
Theoretical pI: Translated: 11.31; Mature: 11.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKTTKGGAPKKGELPSTLQRSSAKAQRTFAKAHDAAAQEYGSEERAHRVAYSAVKHSFE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH KVGDHWEPKAKKGPSDQRARSGGPRASGASAEGVDANASKKHLLDVARRLDVRGRSTMTK HHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH SELVDAIKKHNRRARAR HHHHHHHHHHHHHHCCC >Mature Secondary Structure PKTTKGGAPKKGELPSTLQRSSAKAQRTFAKAHDAAAQEYGSEERAHRVAYSAVKHSFE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH KVGDHWEPKAKKGPSDQRARSGGPRASGASAEGVDANASKKHLLDVARRLDVRGRSTMTK HHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH SELVDAIKKHNRRARAR HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA