| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409023
Identifier: 41409023
GI number: 41409023
Start: 3259188
End: 3260321
Strand: Direct
Name: 41409023
Synonym: MAP2925
Alternate gene names: NA
Gene position: 3259188-3260321 (Clockwise)
Preceding gene: 41409022
Following gene: 41409024
Centisome position: 67.48
GC content: 78.04
Gene sequence:
>1134_bases GTGCCCGGTTCGCTGCGCGACGTGCTGCCCGCCGCGGCCGCCCTGCTCGGCGTCGCAGATGCGGGGCACGAGCCGGGCGG GTCGGCCGTGACCGACTGGGTCGGCGCCGAGCGGGTGGACCGGGTGCTGGTGCTGCTGGTCGATGGGCTGGGCTGGCAGC TGCTCGCCCAGCTGGCCGGCGACGCCCCGCTGCTCGCCGCGGTGCGGGCCGGCGAGGTCGGCCGGCTGACCCGGCTGGAT TGCACCTTCCCGTCGACCACCCCGACCAGCCTGGTGTCGCTGGCCACCGGCGCGGCGCCCGGCCAGCACGGGATCCTGGG CTTCACGCTGCGGGTGCCGGGCACCGACCGGGTGCTCAACCACGTCCGGTGGCGCGACGACCCGGCGCCGGACGCCTGGC AGCCGCTGCCCACCTGGTTCGAGCGGCTCGCCGCCGCCGGTGTCCGCGCCCGCGCCGTGCTGCCGTCGTCGTTTCTGGGC AGTGGCCTGACCGAGGCCGCCTACCGCGGCGCCCGGCTGGTGCCGGCCGAGCCCGCCGACGACTACCCGCGGCTGGTCGG CGAGGAGCTGCGGGCGGGCCCCGGGCTGGTGTACGGCTACACCGCGGAGCTGGACACCGCGGCCCACCTGTTCGGGATCG GCTCGCCGCAGTGGCACACCGCGGCGGCGGCCGTCGACGCCCTGCTGTCCGGCCTGCTCGAGGCGCTGCCGCCGAATGCC GCGCTGCTGGTGACCGCCGACCACGGCGGCCTCAACGTCCCGCCCGAGGCCCGCGTCGACCTGGACAGCGACCCGCGGCT GGCCGCGGGCATCCGCGTGGTGGCCGGCGAGCCGCGGGTGCGGTACCTGCACACCGAGCCGGGCGCCGCGCCCGACGTGC AGGCCGCGTGGTCGGAGCTGCTCGACGGCCGGGCCGCCGTGTACAGCCGCGTGCAGGCGGTGGCCACCGGCATGTTCGGC CCGGTCGCCGACCGGCACCTGCCGCGGCTCGGCGACGTGGTGGTGGTCTGTTCCGGGGACACCGCGGTGCTGGCCAGCGC CCACGAGCCGCCGGAGACGGCGCGCCTGGTCGGCTTCCACGGCGCGGCCACGCCGGCCGAGACGGCGATCCCGCTGATGC TGTTCCGCCGGTAG
Upstream 100 bases:
>100_bases CGGGACCGGCCGAGAAGCCTGAACCGCGCCCTGACGGTCGGGCCGCCCCGGGCCCGACCGCCGACTGGCGCGCGTGTGGG CCGGACGCCAGACTGGCCGG
Downstream 100 bases:
>100_bases CGCCCGGCGGCCGTGCCACACCGGACTCCGACCGAGTTCACAGCTGGTTCCGACCGTCGCGCGGGTTTCCCGCGCTACAT TCGATGCACTGTGATCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphodiesterase; Type I Phosphodiesterase / Nucleotide Pyrophosphatase; AP Superfamily Protein; Nucleotide Pyrophosphatase; Truncated Phosphodiesterase; Phosphodiesterase Protein; Protein Of AP Superfamily; LOW QUALITY PROTEIN Phosphodiesterase
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MPGSLRDVLPAAAALLGVADAGHEPGGSAVTDWVGAERVDRVLVLLVDGLGWQLLAQLAGDAPLLAAVRAGEVGRLTRLD CTFPSTTPTSLVSLATGAAPGQHGILGFTLRVPGTDRVLNHVRWRDDPAPDAWQPLPTWFERLAAAGVRARAVLPSSFLG SGLTEAAYRGARLVPAEPADDYPRLVGEELRAGPGLVYGYTAELDTAAHLFGIGSPQWHTAAAAVDALLSGLLEALPPNA ALLVTADHGGLNVPPEARVDLDSDPRLAAGIRVVAGEPRVRYLHTEPGAAPDVQAAWSELLDGRAAVYSRVQAVATGMFG PVADRHLPRLGDVVVVCSGDTAVLASAHEPPETARLVGFHGAATPAETAIPLMLFRR
Sequences:
>Translated_377_residues MPGSLRDVLPAAAALLGVADAGHEPGGSAVTDWVGAERVDRVLVLLVDGLGWQLLAQLAGDAPLLAAVRAGEVGRLTRLD CTFPSTTPTSLVSLATGAAPGQHGILGFTLRVPGTDRVLNHVRWRDDPAPDAWQPLPTWFERLAAAGVRARAVLPSSFLG SGLTEAAYRGARLVPAEPADDYPRLVGEELRAGPGLVYGYTAELDTAAHLFGIGSPQWHTAAAAVDALLSGLLEALPPNA ALLVTADHGGLNVPPEARVDLDSDPRLAAGIRVVAGEPRVRYLHTEPGAAPDVQAAWSELLDGRAAVYSRVQAVATGMFG PVADRHLPRLGDVVVVCSGDTAVLASAHEPPETARLVGFHGAATPAETAIPLMLFRR >Mature_376_residues PGSLRDVLPAAAALLGVADAGHEPGGSAVTDWVGAERVDRVLVLLVDGLGWQLLAQLAGDAPLLAAVRAGEVGRLTRLDC TFPSTTPTSLVSLATGAAPGQHGILGFTLRVPGTDRVLNHVRWRDDPAPDAWQPLPTWFERLAAAGVRARAVLPSSFLGS GLTEAAYRGARLVPAEPADDYPRLVGEELRAGPGLVYGYTAELDTAAHLFGIGSPQWHTAAAAVDALLSGLLEALPPNAA LLVTADHGGLNVPPEARVDLDSDPRLAAGIRVVAGEPRVRYLHTEPGAAPDVQAAWSELLDGRAAVYSRVQAVATGMFGP VADRHLPRLGDVVVVCSGDTAVLASAHEPPETARLVGFHGAATPAETAIPLMLFRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39194; Mature: 39063
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGSLRDVLPAAAALLGVADAGHEPGGSAVTDWVGAERVDRVLVLLVDGLGWQLLAQLAG CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC DAPLLAAVRAGEVGRLTRLDCTFPSTTPTSLVSLATGAAPGQHGILGFTLRVPGTDRVLN CCHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHH HVRWRDDPAPDAWQPLPTWFERLAAAGVRARAVLPSSFLGSGLTEAAYRGARLVPAEPAD HHHCCCCCCCCCCCCHHHHHHHHHHCCCHHEEECCHHHHCCCHHHHHHCCCEECCCCCCC DYPRLVGEELRAGPGLVYGYTAELDTAAHLFGIGSPQWHTAAAAVDALLSGLLEALPPNA CHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC ALLVTADHGGLNVPPEARVDLDSDPRLAAGIRVVAGEPRVRYLHTEPGAAPDVQAAWSEL EEEEEECCCCCCCCCCCCCCCCCCCCHHHCEEEEECCCCEEEEECCCCCCCCHHHHHHHH LDGRAAVYSRVQAVATGMFGPVADRHLPRLGDVVVVCSGDTAVLASAHEPPETARLVGFH HCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCHHEEEEEC GAATPAETAIPLMLFRR CCCCCHHHCCCHHEECC >Mature Secondary Structure PGSLRDVLPAAAALLGVADAGHEPGGSAVTDWVGAERVDRVLVLLVDGLGWQLLAQLAG CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC DAPLLAAVRAGEVGRLTRLDCTFPSTTPTSLVSLATGAAPGQHGILGFTLRVPGTDRVLN CCHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHH HVRWRDDPAPDAWQPLPTWFERLAAAGVRARAVLPSSFLGSGLTEAAYRGARLVPAEPAD HHHCCCCCCCCCCCCHHHHHHHHHHCCCHHEEECCHHHHCCCHHHHHHCCCEECCCCCCC DYPRLVGEELRAGPGLVYGYTAELDTAAHLFGIGSPQWHTAAAAVDALLSGLLEALPPNA CHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC ALLVTADHGGLNVPPEARVDLDSDPRLAAGIRVVAGEPRVRYLHTEPGAAPDVQAAWSEL EEEEEECCCCCCCCCCCCCCCCCCCCHHHCEEEEECCCCEEEEECCCCCCCCHHHHHHHH LDGRAAVYSRVQAVATGMFGPVADRHLPRLGDVVVVCSGDTAVLASAHEPPETARLVGFH HCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCHHEEEEEC GAATPAETAIPLMLFRR CCCCCHHHCCCHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA