| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is mqo
Identifier: 41409019
GI number: 41409019
Start: 3253814
End: 3255319
Strand: Reverse
Name: mqo
Synonym: MAP2921c
Alternate gene names: 41409019
Gene position: 3255319-3253814 (Counterclockwise)
Preceding gene: 41409026
Following gene: 41409018
Centisome position: 67.4
GC content: 68.92
Gene sequence:
>1506_bases GTGTCATCGCTAGCCAGGACCACCCGCGCGGACGTCGTGCTGGTGGGCGCGGGCATCATGAGCGCCACGCTGGGCGCGTT GCTGCGGCGGCTGCAGCCGGATTGGTCGATGACCTTCGTCGAGCGCCTGGACGCGGTCGCCGCTGAGAGCAGCAGCCCGT GGAACAACGCCGGCACCGGGCATTCGGCGCTGTGCGAGCTCAACTACACCCCGCAGCGCGCCGACGGCTCCATCGACATC GCCAAAGCGGTGCGCATCAACGAGCAGTTCCAGGTGACCCGCCAATTCTGGGCGTATGCCGTGGAGAACGGCATGCTGAC CGATCGGGGCTTCGTGACCCCGATCCCGCACGCGAGTTTCGTGCGCGGGGCGCGGGCCGTCGAGTATCTGCGGCGCCGGC AGCAGGCGCTGGCGCCCAACCCGTTGTTCGCCGGCATCGAATTGATCGAGGACGCCGACGAGTTCGCCCGCCGGCTGCCG TTGATGGCCGACCGGCGGGACTTCTCCGAACCGACCGCGCTGAATTGGGCGCGCCACGGCACCGACGTCGACTTCGGCGC GCTGTCGCGACAGCTGATCGGGTTCTGCGTGCGCGGCGGCGCGACGGCGCTGTTCGGCCATCAGGTGCACAACCTGACGC GGGAGTCCGACGGCAGCTGGACGTTGCTGATCCGCAACCGCCGGACCGGCGAAAAGCACTGGTGCAACGCCAAATTCGTG TTGGTCGGGGCCGGCGGTGACGCGCTGCCGCTGCTGCAGAAGTCGGGTATCGGCGAGGCTCGCGGATTCGCGGGGTTCCC GATCGGCGGTCGGTTCCTGCGCGCCGACAATCCCGTGCTTACCGAGGCGCACCGGGCCAAGGTGTACGGGGCTCCAGCGC CGGGGGCCCCGCCGCTGGGAGCGTTGCATCTGGACCTGCGCTACGTCAACGGCAAGCCGTGGCTGGTGTTCGGGCCGTAT GCCGGCTGGTCGCCGAAGTTCTTGAAACACGGGCACTTCACCGATCTGCCCCGCTCGGTGCGGCCGCACAATCTGGTCGC GCTGCTCGGCGTCGGCGTCACCCAGCTGACGTTGCTGCGGTACCTGATCGGCCAGTTGCGGCTGTCCGCGCCGGACCGGA TGCGGATGCTGCGCGAATTCGCGCCCACCGCAGTGGATTCGGACTGGGAGCTGACGGTGGCCGGTCAGCGGGTGCAGGTG ATCCGGCGCGATCGGCGCCGCGGCGGCGTGCTCGACTTCGACACCACCGTGGTGGCGGCCGGCGACGGCAGCATCGCGGG GTTGCTCGGCGGCTCGCCGGGAGCGTCGACGGCGGTGCCGATCATGCTCGATGTGCTGCAGCGCTGTTTCGCTGACCGTT ATCGGTCGTGGCTGCCCGCGCTCAAGGAGATGGTTCCCTCGCTGGGCGTGACGCTGTCCGACGAGCCGGCGCTGTATGAG GAAGTCTATTCATGGGGAACGAAGATCCTGGGACTGGACGAGTTGGATGAGGAGCGCCCTAAGTGA
Upstream 100 bases:
>100_bases AGCTTTTGCCGGCCGCGGCGACCCCGCGCGTGGTTCGCGTCGCTTTGCCACCGGATAACCTGAGGATCGGCATGCCTCGA GGAAAAGGACCAACAAGCCG
Downstream 100 bases:
>100_bases CACGCGCCGACGACGATGCAGAGCGCAGCGATGAGGAGGAGCGGCGCAGATGACTCGCGCCGACGACGATGCAGAGCGCA GCGATGAGGAGGAGCGGCGC
Product: malate:quinone oxidoreductase
Products: NA
Alternate protein names: MQO; Malate dehydrogenase [quinone]
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MSSLARTTRADVVLVGAGIMSATLGALLRRLQPDWSMTFVERLDAVAAESSSPWNNAGTGHSALCELNYTPQRADGSIDI AKAVRINEQFQVTRQFWAYAVENGMLTDRGFVTPIPHASFVRGARAVEYLRRRQQALAPNPLFAGIELIEDADEFARRLP LMADRRDFSEPTALNWARHGTDVDFGALSRQLIGFCVRGGATALFGHQVHNLTRESDGSWTLLIRNRRTGEKHWCNAKFV LVGAGGDALPLLQKSGIGEARGFAGFPIGGRFLRADNPVLTEAHRAKVYGAPAPGAPPLGALHLDLRYVNGKPWLVFGPY AGWSPKFLKHGHFTDLPRSVRPHNLVALLGVGVTQLTLLRYLIGQLRLSAPDRMRMLREFAPTAVDSDWELTVAGQRVQV IRRDRRRGGVLDFDTTVVAAGDGSIAGLLGGSPGASTAVPIMLDVLQRCFADRYRSWLPALKEMVPSLGVTLSDEPALYE EVYSWGTKILGLDELDEERPK
Sequences:
>Translated_501_residues MSSLARTTRADVVLVGAGIMSATLGALLRRLQPDWSMTFVERLDAVAAESSSPWNNAGTGHSALCELNYTPQRADGSIDI AKAVRINEQFQVTRQFWAYAVENGMLTDRGFVTPIPHASFVRGARAVEYLRRRQQALAPNPLFAGIELIEDADEFARRLP LMADRRDFSEPTALNWARHGTDVDFGALSRQLIGFCVRGGATALFGHQVHNLTRESDGSWTLLIRNRRTGEKHWCNAKFV LVGAGGDALPLLQKSGIGEARGFAGFPIGGRFLRADNPVLTEAHRAKVYGAPAPGAPPLGALHLDLRYVNGKPWLVFGPY AGWSPKFLKHGHFTDLPRSVRPHNLVALLGVGVTQLTLLRYLIGQLRLSAPDRMRMLREFAPTAVDSDWELTVAGQRVQV IRRDRRRGGVLDFDTTVVAAGDGSIAGLLGGSPGASTAVPIMLDVLQRCFADRYRSWLPALKEMVPSLGVTLSDEPALYE EVYSWGTKILGLDELDEERPK >Mature_500_residues SSLARTTRADVVLVGAGIMSATLGALLRRLQPDWSMTFVERLDAVAAESSSPWNNAGTGHSALCELNYTPQRADGSIDIA KAVRINEQFQVTRQFWAYAVENGMLTDRGFVTPIPHASFVRGARAVEYLRRRQQALAPNPLFAGIELIEDADEFARRLPL MADRRDFSEPTALNWARHGTDVDFGALSRQLIGFCVRGGATALFGHQVHNLTRESDGSWTLLIRNRRTGEKHWCNAKFVL VGAGGDALPLLQKSGIGEARGFAGFPIGGRFLRADNPVLTEAHRAKVYGAPAPGAPPLGALHLDLRYVNGKPWLVFGPYA GWSPKFLKHGHFTDLPRSVRPHNLVALLGVGVTQLTLLRYLIGQLRLSAPDRMRMLREFAPTAVDSDWELTVAGQRVQVI RRDRRRGGVLDFDTTVVAAGDGSIAGLLGGSPGASTAVPIMLDVLQRCFADRYRSWLPALKEMVPSLGVTLSDEPALYEE VYSWGTKILGLDELDEERPK
Specific function: Tricarboxylic acid cycle. [C]
COG id: COG0579
COG function: function code R; Predicted dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MQO family
Homologues:
Organism=Escherichia coli, GI1788539, Length=487, Percent_Identity=48.6652977412731, Blast_Score=462, Evalue=1e-131,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MQO_MYCPA (Q73VU0)
Other databases:
- EMBL: AE016958 - RefSeq: NP_961855.1 - ProteinModelPortal: Q73VU0 - EnsemblBacteria: EBMYCT00000037273 - GeneID: 2721811 - GenomeReviews: AE016958_GR - KEGG: mpa:MAP2921c - NMPDR: fig|262316.1.peg.2921 - GeneTree: EBGT00050000015585 - HOGENOM: HBG289663 - OMA: NALKEYF - ProtClustDB: PRK05257 - BRENDA: 1.1.99.16 - HAMAP: MF_00212 - InterPro: IPR006231 - TIGRFAMs: TIGR01320
Pfam domain/function: PF06039 Mqo
EC number: =1.1.5.4
Molecular weight: Translated: 54937; Mature: 54806
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLARTTRADVVLVGAGIMSATLGALLRRLQPDWSMTFVERLDAVAAESSSPWNNAGTG CCCHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCC HSALCELNYTPQRADGSIDIAKAVRINEQFQVTRQFWAYAVENGMLTDRGFVTPIPHASF CCEEEEECCCCCCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH VRGARAVEYLRRRQQALAPNPLFAGIELIEDADEFARRLPLMADRRDFSEPTALNWARHG HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCC TDVDFGALSRQLIGFCVRGGATALFGHQVHNLTRESDGSWTLLIRNRRTGEKHWCNAKFV CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEE LVGAGGDALPLLQKSGIGEARGFAGFPIGGRFLRADNPVLTEAHRAKVYGAPAPGAPPLG EEECCCCCCHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHEEECCCCCCCCCCC ALHLDLRYVNGKPWLVFGPYAGWSPKFLKHGHFTDLPRSVRPHNLVALLGVGVTQLTLLR EEEEEEEEECCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHH YLIGQLRLSAPDRMRMLREFAPTAVDSDWELTVAGQRVQVIRRDRRRGGVLDFDTTVVAA HHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHCCCCEEECCEEEEE GDGSIAGLLGGSPGASTAVPIMLDVLQRCFADRYRSWLPALKEMVPSLGVTLSDEPALYE CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHH EVYSWGTKILGLDELDEERPK HHHHHCCEEECCHHHHHCCCC >Mature Secondary Structure SSLARTTRADVVLVGAGIMSATLGALLRRLQPDWSMTFVERLDAVAAESSSPWNNAGTG CCHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCC HSALCELNYTPQRADGSIDIAKAVRINEQFQVTRQFWAYAVENGMLTDRGFVTPIPHASF CCEEEEECCCCCCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH VRGARAVEYLRRRQQALAPNPLFAGIELIEDADEFARRLPLMADRRDFSEPTALNWARHG HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCC TDVDFGALSRQLIGFCVRGGATALFGHQVHNLTRESDGSWTLLIRNRRTGEKHWCNAKFV CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEE LVGAGGDALPLLQKSGIGEARGFAGFPIGGRFLRADNPVLTEAHRAKVYGAPAPGAPPLG EEECCCCCCHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHEEECCCCCCCCCCC ALHLDLRYVNGKPWLVFGPYAGWSPKFLKHGHFTDLPRSVRPHNLVALLGVGVTQLTLLR EEEEEEEEECCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHH YLIGQLRLSAPDRMRMLREFAPTAVDSDWELTVAGQRVQVIRRDRRRGGVLDFDTTVVAA HHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHCCCCEEECCEEEEE GDGSIAGLLGGSPGASTAVPIMLDVLQRCFADRYRSWLPALKEMVPSLGVTLSDEPALYE CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHH EVYSWGTKILGLDELDEERPK HHHHHCCEEECCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA