Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41408999

Identifier: 41408999

GI number: 41408999

Start: 3230943

End: 3231596

Strand: Direct

Name: 41408999

Synonym: MAP2901

Alternate gene names: NA

Gene position: 3230943-3231596 (Clockwise)

Preceding gene: 41408993

Following gene: 41409000

Centisome position: 66.9

GC content: 68.04

Gene sequence:

>654_bases
GTGACGCCGCGCACCCGACTTGTACACTCCCGGCAAGGAACCGCTGAGGCGTCAGGGGGTGTCGTGTTCGCCAATGTTCG
GCTGTTGGGGGCGCTGGGTGCGCTGCTCGCAGCGGCCATCGCGGGCACCGCGGGGGTGCTGAGCGCCCCACCCGCGCCGG
ACGGCGGCGCCGCCGGGCCCGTCGAGCTGCGATCGACCGCCCAGCCGCTGGAGACCACCATGAAGAGCCCCATCGTGGCG
ACCACCGACCCGCGCCCGTTCGACCCGTGCGAGGACATCCCGTTCGACGCCGTCCAGGGGCTGGGGCTGGCCTTCACGCC
ACCCGAACACGAGGACGGGCTGCGCTGCCACTTCGACGCCGGGAACTACCAGGTGGCCGTCGAGCCGATCATCTGGCGCA
CCTACGAGCAGTCGTTGCCCGCCGACGCGGTCGAGACGACGATCGCCGGCCACCGCGCCGCGCAGTATTGGGTGCTCAAG
CCCACCTACCACAACAGCTACTGGTTCTACTCCTGCATGGTGGCGTTCAAGACCAGCTACGGCGTGCTGCAGCAGGCGTT
GTACTACTCGACCGTTTACTCCAATCCCGAGGTCGACTGCATGCAAACCAATCTGCAGCGCGCCAACGACCTGGCCCCCT
ACTACAAGTTCTAG

Upstream 100 bases:

>100_bases
GTTGTCCCGCGTTGCTCGATTCCTGGCCTGCCACGACTCCCCACCCTAACGACTCCACCGCGCCATCCCCGCTCCGATTG
GAACAAGTTCTTGTCGGGCT

Downstream 100 bases:

>100_bases
GCCGTGAGTCTGACTTCACTTCGCCCGGCGCAGCCGGCGCTGCACACGCTGCGACACCTCGGCGGCAGGGCCGCCGGCCG
GCTGCTGGGCCTGCCTCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MTPRTRLVHSRQGTAEASGGVVFANVRLLGALGALLAAAIAGTAGVLSAPPAPDGGAAGPVELRSTAQPLETTMKSPIVA
TTDPRPFDPCEDIPFDAVQGLGLAFTPPEHEDGLRCHFDAGNYQVAVEPIIWRTYEQSLPADAVETTIAGHRAAQYWVLK
PTYHNSYWFYSCMVAFKTSYGVLQQALYYSTVYSNPEVDCMQTNLQRANDLAPYYKF

Sequences:

>Translated_217_residues
MTPRTRLVHSRQGTAEASGGVVFANVRLLGALGALLAAAIAGTAGVLSAPPAPDGGAAGPVELRSTAQPLETTMKSPIVA
TTDPRPFDPCEDIPFDAVQGLGLAFTPPEHEDGLRCHFDAGNYQVAVEPIIWRTYEQSLPADAVETTIAGHRAAQYWVLK
PTYHNSYWFYSCMVAFKTSYGVLQQALYYSTVYSNPEVDCMQTNLQRANDLAPYYKF
>Mature_216_residues
TPRTRLVHSRQGTAEASGGVVFANVRLLGALGALLAAAIAGTAGVLSAPPAPDGGAAGPVELRSTAQPLETTMKSPIVAT
TDPRPFDPCEDIPFDAVQGLGLAFTPPEHEDGLRCHFDAGNYQVAVEPIIWRTYEQSLPADAVETTIAGHRAAQYWVLKP
TYHNSYWFYSCMVAFKTSYGVLQQALYYSTVYSNPEVDCMQTNLQRANDLAPYYKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23519; Mature: 23387

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPRTRLVHSRQGTAEASGGVVFANVRLLGALGALLAAAIAGTAGVLSAPPAPDGGAAGP
CCCCCCEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
VELRSTAQPLETTMKSPIVATTDPRPFDPCEDIPFDAVQGLGLAFTPPEHEDGLRCHFDA
CHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHCCCEEECCCCCCCCCEEEEEC
GNYQVAVEPIIWRTYEQSLPADAVETTIAGHRAAQYWVLKPTYHNSYWFYSCMVAFKTSY
CCEEEEECHHEEEHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
GVLQQALYYSTVYSNPEVDCMQTNLQRANDLAPYYKF
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TPRTRLVHSRQGTAEASGGVVFANVRLLGALGALLAAAIAGTAGVLSAPPAPDGGAAGP
CCCCCEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
VELRSTAQPLETTMKSPIVATTDPRPFDPCEDIPFDAVQGLGLAFTPPEHEDGLRCHFDA
CHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHCCCEEECCCCCCCCCEEEEEC
GNYQVAVEPIIWRTYEQSLPADAVETTIAGHRAAQYWVLKPTYHNSYWFYSCMVAFKTSY
CCEEEEECHHEEEHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
GVLQQALYYSTVYSNPEVDCMQTNLQRANDLAPYYKF
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA