| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408979
Identifier: 41408979
GI number: 41408979
Start: 3209812
End: 3210894
Strand: Reverse
Name: 41408979
Synonym: MAP2881c
Alternate gene names: NA
Gene position: 3210894-3209812 (Counterclockwise)
Preceding gene: 41408980
Following gene: 41408977
Centisome position: 66.48
GC content: 65.1
Gene sequence:
>1083_bases ATGGGCACAGCACCGATTCGCGTCTTCCAGGTCGGAAGCGGCAACGTCGGCTCCGAGATGATCAGGCGGATCGCGACCCA GCCGGATCTGGAACTGATTGGCGTGCACTGTTATTCGCCCGAGAAGATCGGCAAGGACACCGGACAGTTCGCCGGCCTGG CGCCCAACGGGGTGAAGTTCACCGGGACTGTCGAGGAGATCATCGCCGCCAAGCCGGACGTGCTGACCTTCCACGGCGTG TTTCCCGACGAGGACCTCTACGTCAAGGTCCTCGAGGCGGGCATCGACATCGTCACCACCGCGGACTGGATCACCGGCTG GCGCCGCGACAAAAACCACCCGCACCCGTCGGGCAAGCCGGTGACCCAGCTGCTGGCCGAGGCCGCCGCGAAGGGCGGCG CGACGTTCTACGGCACCGGCATGAACCCGGGGCTGAACCAGATCCTGGGTGTGGTGTGCTCGGCCGACGTCGCCGAGATC GAGAACGTCACCACCATCGAATCGGTCGACGTGTCCTGCCACCACTCCAAGGACACCTGGATCGAGGTGGGATACGGCCA ACCGGTGGACGATCCGGAGATCCCGGCCAAGCTGGAGAAGTACACCCGCGTCTTCGCCGACAGCGTGTACATGATGGCCG ACTGCTTCGACCTGACCCTCGACGAGGTCACGTTCAGCTACGAGTTGGGTGCGTGCACCAAGGACGTCGACCTGGGCTGG TACACGCTGCCCAAGGGGTCGTTGGGCGGCAACTACATCAAGTACCAGGGCATGGTCGACGGCGTGCCGCGGGTGGAGAC GCACCTGGAATGGCAGATGACCCCGCACACCGACCCGAGCTGGAATGTCAAGGGCTGCTACATCACCCAGATCAAGGGCG ACCCGTGCATCTACAACAAGCACATGATCTTCCCCAAGCCCGGCGTGGACCTGTCCAACCCGGACAACTTCGCGTCCATC GGCATGACCGTGACCGGCATGCCCGCGCTCGCCGCGATCAGGTCGGTGGTGGCCGCGCCGCCCGGGCTGCTCACCAGCGC CGATCTGCCGCTGCGCGGTTTCGCCGGGCGGTTCAAGAAGTAG
Upstream 100 bases:
>100_bases CCGCCGGCGCTGGCCGCCGACGAGTATCAGGGCTTCATGGCAATTCGCCAGTGGGCCAAGCAGTTCTATCCCGAGTTCGC AGCGCAGGAGGCTTAGGCAA
Downstream 100 bases:
>100_bases GGACCTCACGGGTCCTCGCCGTCGAAATCGCGCTCCGGATGGTGAAAGTCGTTGGTGCGCGCGCCGCGGTCCCACTGCGG TGGCGGGATCCACGCCGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Dihydrodipicolinate Reductase N-Terminus Domain Protein; Dihydrodipicolinate Reductase-Like Protein; Dihydropicolinate Reductase
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MGTAPIRVFQVGSGNVGSEMIRRIATQPDLELIGVHCYSPEKIGKDTGQFAGLAPNGVKFTGTVEEIIAAKPDVLTFHGV FPDEDLYVKVLEAGIDIVTTADWITGWRRDKNHPHPSGKPVTQLLAEAAAKGGATFYGTGMNPGLNQILGVVCSADVAEI ENVTTIESVDVSCHHSKDTWIEVGYGQPVDDPEIPAKLEKYTRVFADSVYMMADCFDLTLDEVTFSYELGACTKDVDLGW YTLPKGSLGGNYIKYQGMVDGVPRVETHLEWQMTPHTDPSWNVKGCYITQIKGDPCIYNKHMIFPKPGVDLSNPDNFASI GMTVTGMPALAAIRSVVAAPPGLLTSADLPLRGFAGRFKK
Sequences:
>Translated_360_residues MGTAPIRVFQVGSGNVGSEMIRRIATQPDLELIGVHCYSPEKIGKDTGQFAGLAPNGVKFTGTVEEIIAAKPDVLTFHGV FPDEDLYVKVLEAGIDIVTTADWITGWRRDKNHPHPSGKPVTQLLAEAAAKGGATFYGTGMNPGLNQILGVVCSADVAEI ENVTTIESVDVSCHHSKDTWIEVGYGQPVDDPEIPAKLEKYTRVFADSVYMMADCFDLTLDEVTFSYELGACTKDVDLGW YTLPKGSLGGNYIKYQGMVDGVPRVETHLEWQMTPHTDPSWNVKGCYITQIKGDPCIYNKHMIFPKPGVDLSNPDNFASI GMTVTGMPALAAIRSVVAAPPGLLTSADLPLRGFAGRFKK >Mature_359_residues GTAPIRVFQVGSGNVGSEMIRRIATQPDLELIGVHCYSPEKIGKDTGQFAGLAPNGVKFTGTVEEIIAAKPDVLTFHGVF PDEDLYVKVLEAGIDIVTTADWITGWRRDKNHPHPSGKPVTQLLAEAAAKGGATFYGTGMNPGLNQILGVVCSADVAEIE NVTTIESVDVSCHHSKDTWIEVGYGQPVDDPEIPAKLEKYTRVFADSVYMMADCFDLTLDEVTFSYELGACTKDVDLGWY TLPKGSLGGNYIKYQGMVDGVPRVETHLEWQMTPHTDPSWNVKGCYITQIKGDPCIYNKHMIFPKPGVDLSNPDNFASIG MTVTGMPALAAIRSVVAAPPGLLTSADLPLRGFAGRFKK
Specific function: Unknown
COG id: COG3804
COG function: function code S; Uncharacterized conserved protein related to dihydrodipicolinate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38969; Mature: 38838
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTAPIRVFQVGSGNVGSEMIRRIATQPDLELIGVHCYSPEKIGKDTGQFAGLAPNGVKF CCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEECCHHHHCCCCCCCCCCCCCCEEE TGTVEEIIAAKPDVLTFHGVFPDEDLYVKVLEAGIDIVTTADWITGWRRDKNHPHPSGKP CCCHHHHHCCCCCEEEEECCCCCCHHHHHEECCCCCEEEEHHHHHHCCCCCCCCCCCCCH VTQLLAEAAAKGGATFYGTGMNPGLNQILGVVCSADVAEIENVTTIESVDVSCHHSKDTW HHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCHHHHCCCEEEEEECEEEECCCCCE IEVGYGQPVDDPEIPAKLEKYTRVFADSVYMMADCFDLTLDEVTFSYELGACTKDVDLGW EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEHHEEEEEECCCCCCCCCCCE YTLPKGSLGGNYIKYQGMVDGVPRVETHLEWQMTPHTDPSWNVKGCYITQIKGDPCIYNK EECCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCEEECC HMIFPKPGVDLSNPDNFASIGMTVTGMPALAAIRSVVAAPPGLLTSADLPLRGFAGRFKK EEECCCCCCCCCCCCCCEECCEEEECCHHHHHHHHHHHCCCCCEECCCCCCHHCCCCCCC >Mature Secondary Structure GTAPIRVFQVGSGNVGSEMIRRIATQPDLELIGVHCYSPEKIGKDTGQFAGLAPNGVKF CCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEECCHHHHCCCCCCCCCCCCCCEEE TGTVEEIIAAKPDVLTFHGVFPDEDLYVKVLEAGIDIVTTADWITGWRRDKNHPHPSGKP CCCHHHHHCCCCCEEEEECCCCCCHHHHHEECCCCCEEEEHHHHHHCCCCCCCCCCCCCH VTQLLAEAAAKGGATFYGTGMNPGLNQILGVVCSADVAEIENVTTIESVDVSCHHSKDTW HHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCHHHHCCCEEEEEECEEEECCCCCE IEVGYGQPVDDPEIPAKLEKYTRVFADSVYMMADCFDLTLDEVTFSYELGACTKDVDLGW EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEHHEEEEEECCCCCCCCCCCE YTLPKGSLGGNYIKYQGMVDGVPRVETHLEWQMTPHTDPSWNVKGCYITQIKGDPCIYNK EECCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCEEECC HMIFPKPGVDLSNPDNFASIGMTVTGMPALAAIRSVVAAPPGLLTSADLPLRGFAGRFKK EEECCCCCCCCCCCCCCEECCEEEECCHHHHHHHHHHHCCCCCEECCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA