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The map label for this gene is ycaQ [H]

Identifier: 41408964

GI number: 41408964

Start: 3193646

End: 3194884

Strand: Reverse

Name: ycaQ [H]

Synonym: MAP2866c

Alternate gene names: 41408964

Gene position: 3194884-3193646 (Counterclockwise)

Preceding gene: 41408965

Following gene: 41408963

Centisome position: 66.15

GC content: 73.85

Gene sequence:

>1239_bases
GTGTCGCCGGGCGGCGGTATCGTCGGCGCGGTGTCGACCCGCAGGCTGTCCGTCGCCCAGGCCCGCCGGATTGCCGTTGC
GGCGCAAGGCTTTACCGAGCCCCGGCCCGCGGGTGCCGTCACCCGCGCGCACCTGAACCGGCTGATATCCAAAATCCAAG
TGCTGCAATTGGATTCGGTGTCGGTGACGGTGCGTGCCCACTACGCTCCGGTGTTCAGCCGGCTCGGCCCGTATGACCGC
GAGGTGCTCGACCGCGCCGCGTGGGGCCCGCGCTCGTCGCGGCTGCTGGTCGAGTACTGGGCGCATGAGGCCGCGCTGAT
GGCCGTCGAGGATTGGCCGTTGCTGCGCTGGCGGATGCGTCAGTACCGGCACGGCCGGTGGGGAACCCACATCGTGCAGG
CCAATCCGCGGCTCGCCGACGCGGTCGTGGCCGCCGTCGCCGAGCTCGGGCCCAGCACGGCCGGCCAGATCGAGGCGCAT
CTGGCGGCCGAGCCGCGCCGCAGGAAGGGCGCCTGGTGGAACCGCAGCGACACCAAGTGGGTCGCCGAGGCGCTGTTCGC
CGCCGGAGTGCTCACCACCGCCACCCGGGTCGGCTTCGCCCGCCACTACGACCTGGTGGAACGGGTGCTGCCGGCCGACG
TGCTGGCCCGCCGGGTCGACGACGACGAGGCGATCCGGGAGCTGACGCTGCGGGCCGCCGGTGCGCTGGGGGTGGGCACC
GAGGCCGACATTCGCGACTACTTCCGGCTGTCCGCCGCGCAGGTCAAGCCGGCGATCGCCGAGCTGGTGGCCGCCGGCGA
CCTGGAACGGGTCGAGGTGGCCGGCTGGCCGGCGCCGGCCTACCTGCGGGCCGGCCGCGCCGTGCCGCGCACGGACCGCG
GCACCGCGCTGCTGTGCCCATTCGACCCGCTGATCTTCTTCCGGCCCCGCGTCGAGCGGCTCTTCGAATTCCATTACCGC
ATCGAGATTTACACGCCGGCCGCCAAGCGCCGGTACGGCTACTACGTGTGGCCGCTGCTGATGGACGGGCGGCTGGCGGC
CCGCGTCGACCTGAAGGCCGACCGGGCCGAGGGCACGCTGCGCGTCCTCGGCGCCTTCGCCGAGCCGCAGGCGCCGCGGC
CCCGGGTCGCCGCGGTGCTGGCCGGTGAGTTGTGGTCCATGGCGTCCTGGCTGGGGCTGGGCGGGCTCAGCGTCGCCGAC
CGCGGGGATCTGGCTCTGGCGCTGCGTGCGGTCGCCTGA

Upstream 100 bases:

>100_bases
GGACGTCCCGGCCGCGCTGCAGGCCGCCTACGACGAGCAGCAGGGCTCGGCCGACGACGGCGTGCTGGCGGCGATGGACG
GCAAGGTCCGCGCGGGCTGA

Downstream 100 bases:

>100_bases
CGCGGCCGCACGGCGCGCATCGTCGCCGGGCGGGGTCAGATTGCCCGGCTCCTCCTCGCGCCGCGCGGCGGCGCGCATCG
TCGCCGGGCTAAGGTGATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MSPGGGIVGAVSTRRLSVAQARRIAVAAQGFTEPRPAGAVTRAHLNRLISKIQVLQLDSVSVTVRAHYAPVFSRLGPYDR
EVLDRAAWGPRSSRLLVEYWAHEAALMAVEDWPLLRWRMRQYRHGRWGTHIVQANPRLADAVVAAVAELGPSTAGQIEAH
LAAEPRRRKGAWWNRSDTKWVAEALFAAGVLTTATRVGFARHYDLVERVLPADVLARRVDDDEAIRELTLRAAGALGVGT
EADIRDYFRLSAAQVKPAIAELVAAGDLERVEVAGWPAPAYLRAGRAVPRTDRGTALLCPFDPLIFFRPRVERLFEFHYR
IEIYTPAAKRRYGYYVWPLLMDGRLAARVDLKADRAEGTLRVLGAFAEPQAPRPRVAAVLAGELWSMASWLGLGGLSVAD
RGDLALALRAVA

Sequences:

>Translated_412_residues
MSPGGGIVGAVSTRRLSVAQARRIAVAAQGFTEPRPAGAVTRAHLNRLISKIQVLQLDSVSVTVRAHYAPVFSRLGPYDR
EVLDRAAWGPRSSRLLVEYWAHEAALMAVEDWPLLRWRMRQYRHGRWGTHIVQANPRLADAVVAAVAELGPSTAGQIEAH
LAAEPRRRKGAWWNRSDTKWVAEALFAAGVLTTATRVGFARHYDLVERVLPADVLARRVDDDEAIRELTLRAAGALGVGT
EADIRDYFRLSAAQVKPAIAELVAAGDLERVEVAGWPAPAYLRAGRAVPRTDRGTALLCPFDPLIFFRPRVERLFEFHYR
IEIYTPAAKRRYGYYVWPLLMDGRLAARVDLKADRAEGTLRVLGAFAEPQAPRPRVAAVLAGELWSMASWLGLGGLSVAD
RGDLALALRAVA
>Mature_411_residues
SPGGGIVGAVSTRRLSVAQARRIAVAAQGFTEPRPAGAVTRAHLNRLISKIQVLQLDSVSVTVRAHYAPVFSRLGPYDRE
VLDRAAWGPRSSRLLVEYWAHEAALMAVEDWPLLRWRMRQYRHGRWGTHIVQANPRLADAVVAAVAELGPSTAGQIEAHL
AAEPRRRKGAWWNRSDTKWVAEALFAAGVLTTATRVGFARHYDLVERVLPADVLARRVDDDEAIRELTLRAAGALGVGTE
ADIRDYFRLSAAQVKPAIAELVAAGDLERVEVAGWPAPAYLRAGRAVPRTDRGTALLCPFDPLIFFRPRVERLFEFHYRI
EIYTPAAKRRYGYYVWPLLMDGRLAARVDLKADRAEGTLRVLGAFAEPQAPRPRVAAVLAGELWSMASWLGLGGLSVADR
GDLALALRAVA

Specific function: Unknown

COG id: COG3214

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787145, Length=372, Percent_Identity=32.5268817204301, Blast_Score=162, Evalue=3e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009351 [H]

Pfam domain/function: PF06224 DUF1006 [H]

EC number: NA

Molecular weight: Translated: 45364; Mature: 45232

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPGGGIVGAVSTRRLSVAQARRIAVAAQGFTEPRPAGAVTRAHLNRLISKIQVLQLDSV
CCCCCCEEECCCHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHEEEECCE
SVTVRAHYAPVFSRLGPYDREVLDRAAWGPRSSRLLVEYWAHEAALMAVEDWPLLRWRMR
EEEEEEHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHEEHHCHHEEEEECCCHHHHHHHH
QYRHGRWGTHIVQANPRLADAVVAAVAELGPSTAGQIEAHLAAEPRRRKGAWWNRSDTKW
HHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHCCCCCCCCCHHH
VAEALFAAGVLTTATRVGFARHYDLVERVLPADVLARRVDDDEAIRELTLRAAGALGVGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCC
EADIRDYFRLSAAQVKPAIAELVAAGDLERVEVAGWPAPAYLRAGRAVPRTDRGTALLCP
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHCCCCCCCCCCCCEEEEC
FDPLIFFRPRVERLFEFHYRIEIYTPAAKRRYGYYVWPLLMDGRLAARVDLKADRAEGTL
CCCCEEECHHHHHHHHEEEEEEEECCHHHCCCCEEEEEEEECCCEEEEEECCCCCCCCCE
RVLGAFAEPQAPRPRVAAVLAGELWSMASWLGLGGLSVADRGDLALALRAVA
EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
SPGGGIVGAVSTRRLSVAQARRIAVAAQGFTEPRPAGAVTRAHLNRLISKIQVLQLDSV
CCCCCEEECCCHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHEEEECCE
SVTVRAHYAPVFSRLGPYDREVLDRAAWGPRSSRLLVEYWAHEAALMAVEDWPLLRWRMR
EEEEEEHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHEEHHCHHEEEEECCCHHHHHHHH
QYRHGRWGTHIVQANPRLADAVVAAVAELGPSTAGQIEAHLAAEPRRRKGAWWNRSDTKW
HHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHCCCCCCCCCHHH
VAEALFAAGVLTTATRVGFARHYDLVERVLPADVLARRVDDDEAIRELTLRAAGALGVGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCC
EADIRDYFRLSAAQVKPAIAELVAAGDLERVEVAGWPAPAYLRAGRAVPRTDRGTALLCP
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHCCCCCCCCCCCCEEEEC
FDPLIFFRPRVERLFEFHYRIEIYTPAAKRRYGYYVWPLLMDGRLAARVDLKADRAEGTL
CCCCEEECHHHHHHHHEEEEEEEECCHHHCCCCEEEEEEEECCCEEEEEECCCCCCCCCE
RVLGAFAEPQAPRPRVAAVLAGELWSMASWLGLGGLSVADRGDLALALRAVA
EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]