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The map label for this gene is ycdJ [C]

Identifier: 41408930

GI number: 41408930

Start: 3159802

End: 3160833

Strand: Direct

Name: ycdJ [C]

Synonym: MAP2832

Alternate gene names: 41408930

Gene position: 3159802-3160833 (Clockwise)

Preceding gene: 41408929

Following gene: 41408934

Centisome position: 65.42

GC content: 71.03

Gene sequence:

>1032_bases
ATGACCGAGCGGAAGCGCAAGAACACGCTCCGCCCGGTGCGGGAAGTGAGCGCACCCCGCCTCGAGTTCCGCACCATTCA
CGGTTACCGCCGCGCCTACCGCATCGCCGGGTCGGGGCCGGCGATCCTGTTGATCCACGGCATCGGCGACAACTCCACCA
CGTGGAACACCGTGCAGGCCAAGCTCGCCCAGCGGTTCACCGTCATCGCCCCGGACCTGTTGGGGCACGGGCAGTCCGAC
AAGCCGCGCGCCGACTACTCGGTGGCGGCCTACGCCAACGGGATGCGCGACCTGCTGGCGGTGCTCGACATCGAGCGGGT
GACCATCGTCGGCCATTCCCTGGGCGGCGGGGTGGCCATGCAATTCGCCTACCAGTTCCCGCATTTGGTGGAGCGGCTGA
TCCTGGTCGGCGCCGGCGGGGTGACCAAGGACGTGAACTTCGTGCTGCGCTGGGCGTCGCTGCCGCTGGGCAGCGAAGCC
ATCGCCCTGCTGCGGCTGCCGCTGGTGCTGCCGGCGGTGCAGCTGATGGGCCGCGTCCTGGGCACCGCGCTGGGCAGCAC
CGGCCTGGGCCGCGACCTGCCCAACGTGCTGCGGATCCTCGACGACCTGCCCGAGCCGACGGCGTCGACGGCGTTCAGCC
GGACGCTGCGGGCGGTGGTGGACTGGCGCGGGCAGATCGTCACCATGCTCGACCGCTGCTACCTGACCGAGGCCATCCCG
GTGCAGATCGTTTGGGGCACCAAGGATGTGGTGGTCCCGGTCCGGCACGCCTGGATGGCGCACGCCGCCATGCCCGGCTC
GCGGCTGGAGATCTTCGAGGGCTCCGGCCACTTTCCGTTCCACGACGACCCGGCCCGGTTCATCGACGTCGTCGAGCGCT
TCATCGACTCCACCGAGCCCGCCGCATACGATCAGGAGGCGCTGCGCCGGTTGCTGCGCAGCGGCGGCGGCGCGCAGGCC
GTCACCGGCCCAGCGCCCACCCGCGTCGCGGTGCTCAGCGCCATGGGATCCGACGAACGCAGCGCCACCTGA

Upstream 100 bases:

>100_bases
GCCCAGCAGGCGGAGAAGAAGTTCGACGACGACGACCAGGCCTGACCCGACCACCCAGCCACCACCGCCGCCACCCCGGC
CCGACAACAAGGTTGGCGAT

Downstream 100 bases:

>100_bases
GTCCGGGCCGGCCGCGGCCGGGGTCGTACAGTCGGGCCATGGGTATCGACGTGACGGTGCTGCGGGTGTTCACCGACTCG
GACGGCAACTTCGGCAATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MTERKRKNTLRPVREVSAPRLEFRTIHGYRRAYRIAGSGPAILLIHGIGDNSTTWNTVQAKLAQRFTVIAPDLLGHGQSD
KPRADYSVAAYANGMRDLLAVLDIERVTIVGHSLGGGVAMQFAYQFPHLVERLILVGAGGVTKDVNFVLRWASLPLGSEA
IALLRLPLVLPAVQLMGRVLGTALGSTGLGRDLPNVLRILDDLPEPTASTAFSRTLRAVVDWRGQIVTMLDRCYLTEAIP
VQIVWGTKDVVVPVRHAWMAHAAMPGSRLEIFEGSGHFPFHDDPARFIDVVERFIDSTEPAAYDQEALRRLLRSGGGAQA
VTGPAPTRVAVLSAMGSDERSAT

Sequences:

>Translated_343_residues
MTERKRKNTLRPVREVSAPRLEFRTIHGYRRAYRIAGSGPAILLIHGIGDNSTTWNTVQAKLAQRFTVIAPDLLGHGQSD
KPRADYSVAAYANGMRDLLAVLDIERVTIVGHSLGGGVAMQFAYQFPHLVERLILVGAGGVTKDVNFVLRWASLPLGSEA
IALLRLPLVLPAVQLMGRVLGTALGSTGLGRDLPNVLRILDDLPEPTASTAFSRTLRAVVDWRGQIVTMLDRCYLTEAIP
VQIVWGTKDVVVPVRHAWMAHAAMPGSRLEIFEGSGHFPFHDDPARFIDVVERFIDSTEPAAYDQEALRRLLRSGGGAQA
VTGPAPTRVAVLSAMGSDERSAT
>Mature_342_residues
TERKRKNTLRPVREVSAPRLEFRTIHGYRRAYRIAGSGPAILLIHGIGDNSTTWNTVQAKLAQRFTVIAPDLLGHGQSDK
PRADYSVAAYANGMRDLLAVLDIERVTIVGHSLGGGVAMQFAYQFPHLVERLILVGAGGVTKDVNFVLRWASLPLGSEAI
ALLRLPLVLPAVQLMGRVLGTALGSTGLGRDLPNVLRILDDLPEPTASTAFSRTLRAVVDWRGQIVTMLDRCYLTEAIPV
QIVWGTKDVVVPVRHAWMAHAAMPGSRLEIFEGSGHFPFHDDPARFIDVVERFIDSTEPAAYDQEALRRLLRSGGGAQAV
TGPAPTRVAVLSAMGSDERSAT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

Organism=Homo sapiens, GI218777840, Length=272, Percent_Identity=25.3676470588235, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI13376164, Length=272, Percent_Identity=25.3676470588235, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI218777837, Length=287, Percent_Identity=22.2996515679443, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI145611434, Length=241, Percent_Identity=28.2157676348548, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI18777795, Length=100, Percent_Identity=36, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI23200008, Length=267, Percent_Identity=25.4681647940075, Blast_Score=66, Evalue=6e-11,
Organism=Homo sapiens, GI23200012, Length=267, Percent_Identity=25.4681647940075, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 37324; Mature: 37192

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTERKRKNTLRPVREVSAPRLEFRTIHGYRRAYRIAGSGPAILLIHGIGDNSTTWNTVQA
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCEEEEEEECCCCCCCHHHHHH
KLAQRFTVIAPDLLGHGQSDKPRADYSVAAYANGMRDLLAVLDIERVTIVGHSLGGGVAM
HHHHHHHEECHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHH
QFAYQFPHLVERLILVGAGGVTKDVNFVLRWASLPLGSEAIALLRLPLVLPAVQLMGRVL
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GTALGSTGLGRDLPNVLRILDDLPEPTASTAFSRTLRAVVDWRGQIVTMLDRCYLTEAIP
HHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCE
VQIVWGTKDVVVPVRHAWMAHAAMPGSRLEIFEGSGHFPFHDDPARFIDVVERFIDSTEP
EEEEECCCCEEHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCC
AAYDQEALRRLLRSGGGAQAVTGPAPTRVAVLSAMGSDERSAT
CCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TERKRKNTLRPVREVSAPRLEFRTIHGYRRAYRIAGSGPAILLIHGIGDNSTTWNTVQA
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCEEEEEEECCCCCCCHHHHHH
KLAQRFTVIAPDLLGHGQSDKPRADYSVAAYANGMRDLLAVLDIERVTIVGHSLGGGVAM
HHHHHHHEECHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHH
QFAYQFPHLVERLILVGAGGVTKDVNFVLRWASLPLGSEAIALLRLPLVLPAVQLMGRVL
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GTALGSTGLGRDLPNVLRILDDLPEPTASTAFSRTLRAVVDWRGQIVTMLDRCYLTEAIP
HHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCE
VQIVWGTKDVVVPVRHAWMAHAAMPGSRLEIFEGSGHFPFHDDPARFIDVVERFIDSTEP
EEEEECCCCEEHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCC
AAYDQEALRRLLRSGGGAQAVTGPAPTRVAVLSAMGSDERSAT
CCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]