| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408914
Identifier: 41408914
GI number: 41408914
Start: 3145515
End: 3145817
Strand: Reverse
Name: 41408914
Synonym: MAP2816c
Alternate gene names: NA
Gene position: 3145817-3145515 (Counterclockwise)
Preceding gene: 41408916
Following gene: 41408912
Centisome position: 65.13
GC content: 62.05
Gene sequence:
>303_bases ATGCCTACCGACTATGACGCTCCACGGCGTACCGAGACCGATGACGTCTCGGAGGACTCGCTGGAGGAGCTCAAAGCGCG ACGGAACGAGGCGGCTTCGTCCGTCGTCGACGTCGACGAATCTGAATCCGCTGAATCTTTCGAACTGCCCGGCGCCGACC TCTCGGGGGAAGAGCTCTCGGTGCGCGTCATCCCGAAGCAGGCTGACGAATTCACCTGCTCGAGCTGCTTTTTGGTGCAA CACCGCAGTCGGCTGGCCAGCGAGAAGAACGGCGTGATGATCTGTACCGACTGCGCGGCCTGA
Upstream 100 bases:
>100_bases CACCTTAAGGGGCCGCGATCCGGGCACGAATCGTTTGGTGGATGCGTTCGACGCTGGTACAAAGCGATGCTTGGATAACG AGGGCATGTGAGGGGAAAGA
Downstream 100 bases:
>100_bases TCGGTCAGCCGCGTAATGCCGACAGCACCCGCTCCGGGTGACGGCAGCTCACCAACCAGTACGGCGTCGGATCGTCCGGG TCGTCGAGTACCACCAGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MPTDYDAPRRTETDDVSEDSLEELKARRNEAASSVVDVDESESAESFELPGADLSGEELSVRVIPKQADEFTCSSCFLVQ HRSRLASEKNGVMICTDCAA
Sequences:
>Translated_100_residues MPTDYDAPRRTETDDVSEDSLEELKARRNEAASSVVDVDESESAESFELPGADLSGEELSVRVIPKQADEFTCSSCFLVQ HRSRLASEKNGVMICTDCAA >Mature_99_residues PTDYDAPRRTETDDVSEDSLEELKARRNEAASSVVDVDESESAESFELPGADLSGEELSVRVIPKQADEFTCSSCFLVQH RSRLASEKNGVMICTDCAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10946; Mature: 10815
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTDYDAPRRTETDDVSEDSLEELKARRNEAASSVVDVDESESAESFELPGADLSGEELS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE VRVIPKQADEFTCSSCFLVQHRSRLASEKNGVMICTDCAA EEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC >Mature Secondary Structure PTDYDAPRRTETDDVSEDSLEELKARRNEAASSVVDVDESESAESFELPGADLSGEELS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE VRVIPKQADEFTCSSCFLVQHRSRLASEKNGVMICTDCAA EEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA