| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is suhB
Identifier: 41408916
GI number: 41408916
Start: 3146669
End: 3147547
Strand: Reverse
Name: suhB
Synonym: MAP2818c
Alternate gene names: 41408916
Gene position: 3147547-3146669 (Counterclockwise)
Preceding gene: 41408922
Following gene: 41408914
Centisome position: 65.17
GC content: 74.06
Gene sequence:
>879_bases GTGATGCCCTCCGATGACGAGCTCGTGCGGCTGCGTTCGGTGGCCGAGACCCTGGCCGCCGAGGCGGCCGCGTTTGTCCG GCGCCGGCGCGCCGAGGTGTTCGGCACCGAGCCCGGCGGGGCGTCCGCCCCCGACGGCGGCGCGGTGCGATCCAAGAGCA CGCCGACCGACCCGGTGACCGTGGTGGACACCGAGACGGAACGGCTGCTGCGGGACCGGTTGGCCCAATTACGGCCCGGC GAACCGATTCTCGGCGAGGAGGGCGGGGGGCCCGCCGAGCCGTCGCCCCCTGGGGACGGAACGGTCACCTGGGTGCTCGA CCCCATCGACGGCACGGTGAATTTCGTTTACGGCATCCCCGCCTATGCGGTCTCGGTCGGCGCTCAGGTCGACGGCGAGT CGGTGGCCGGGGCGGTCGCCGACGTGGTCGGCGACCGGGTGTACTCGGCGGCCGCCGGTCTCGGCGCCCATGTCAGCGAC GGCGCAGGCAGGCAACCGCTGCAGTGCGCGGCGGTCGACGATGTGTCGATGGCGTTGCTGGGCACCGGTTTTGGCTATGC GCGGCAACGGCGCGCGGCGCAGGCGGCGCTGTTGGCGCGGATGCTGCCGGTGGTCCGCGACGTGCGGCGGATCGGCTCGG CGGCGCTGGATCTGTGCATGGTCGCCGCGGGCCGGCTGGACGCCTATTACGAGCACGGTTTGAAAGTGTGGGACCGCGCC GCGGGCGCGCTGATCGCCGCGGAGGCCGGCGCACGGGTGGTGCTGCCGGCACCCGACGGCGACGGGGCCGGGTTGGTGCT GGCCGCCGCGCCCGGGATCGCCGACGAGCTGCTGGCCGTCCTGGAACGCTTCGACGGCCTGGACCCGATCCTGGACTGA
Upstream 100 bases:
>100_bases GAATCTCCTCGGCGTCACTGGGCTGTCCGCCCACCTTAACGCCGCGACCGCGCGGTCCGCGGCGTCTGCGCGGCGGCGGC GACTGTGATGCGATGGACCG
Downstream 100 bases:
>100_bases GCGCCTCAGCAGCTGCTGGCGTGAATCTTGGCCAGCAGCGTGGGATCCGAGGGTTCGGTGGCCCCGGGCCGCAGGGTGGC CAGCACCGCGTCGATGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MMPSDDELVRLRSVAETLAAEAAAFVRRRRAEVFGTEPGGASAPDGGAVRSKSTPTDPVTVVDTETERLLRDRLAQLRPG EPILGEEGGGPAEPSPPGDGTVTWVLDPIDGTVNFVYGIPAYAVSVGAQVDGESVAGAVADVVGDRVYSAAAGLGAHVSD GAGRQPLQCAAVDDVSMALLGTGFGYARQRRAAQAALLARMLPVVRDVRRIGSAALDLCMVAAGRLDAYYEHGLKVWDRA AGALIAAEAGARVVLPAPDGDGAGLVLAAAPGIADELLAVLERFDGLDPILD
Sequences:
>Translated_292_residues MMPSDDELVRLRSVAETLAAEAAAFVRRRRAEVFGTEPGGASAPDGGAVRSKSTPTDPVTVVDTETERLLRDRLAQLRPG EPILGEEGGGPAEPSPPGDGTVTWVLDPIDGTVNFVYGIPAYAVSVGAQVDGESVAGAVADVVGDRVYSAAAGLGAHVSD GAGRQPLQCAAVDDVSMALLGTGFGYARQRRAAQAALLARMLPVVRDVRRIGSAALDLCMVAAGRLDAYYEHGLKVWDRA AGALIAAEAGARVVLPAPDGDGAGLVLAAAPGIADELLAVLERFDGLDPILD >Mature_292_residues MMPSDDELVRLRSVAETLAAEAAAFVRRRRAEVFGTEPGGASAPDGGAVRSKSTPTDPVTVVDTETERLLRDRLAQLRPG EPILGEEGGGPAEPSPPGDGTVTWVLDPIDGTVNFVYGIPAYAVSVGAQVDGESVAGAVADVVGDRVYSAAAGLGAHVSD GAGRQPLQCAAVDDVSMALLGTGFGYARQRRAAQAALLARMLPVVRDVRRIGSAALDLCMVAAGRLDAYYEHGLKVWDRA AGALIAAEAGARVVLPAPDGDGAGLVLAAAPGIADELLAVLERFDGLDPILD
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=205, Percent_Identity=36.0975609756098, Blast_Score=132, Evalue=4e-31, Organism=Homo sapiens, GI221625487, Length=205, Percent_Identity=36.0975609756098, Blast_Score=132, Evalue=5e-31, Organism=Homo sapiens, GI7657236, Length=209, Percent_Identity=34.9282296650718, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI221625507, Length=111, Percent_Identity=37.8378378378378, Blast_Score=80, Evalue=2e-15, Organism=Escherichia coli, GI1788882, Length=235, Percent_Identity=33.1914893617021, Blast_Score=120, Evalue=8e-29, Organism=Caenorhabditis elegans, GI193202570, Length=219, Percent_Identity=34.2465753424658, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI193202572, Length=212, Percent_Identity=33.0188679245283, Blast_Score=103, Evalue=7e-23, Organism=Saccharomyces cerevisiae, GI6320493, Length=213, Percent_Identity=31.4553990610329, Blast_Score=97, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6321836, Length=218, Percent_Identity=29.8165137614679, Blast_Score=96, Evalue=7e-21, Organism=Drosophila melanogaster, GI24664926, Length=204, Percent_Identity=37.2549019607843, Blast_Score=124, Evalue=8e-29, Organism=Drosophila melanogaster, GI21357329, Length=241, Percent_Identity=34.0248962655602, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI24664922, Length=239, Percent_Identity=32.6359832635983, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI21357303, Length=213, Percent_Identity=33.8028169014084, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI21357957, Length=205, Percent_Identity=31.219512195122, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24664918, Length=202, Percent_Identity=33.1683168316832, Blast_Score=100, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 29943; Mature: 29943
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPSDDELVRLRSVAETLAAEAAAFVRRRRAEVFGTEPGGASAPDGGAVRSKSTPTDPVT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEE VVDTETERLLRDRLAQLRPGEPILGEEGGGPAEPSPPGDGTVTWVLDPIDGTVNFVYGIP EEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCH AYAVSVGAQVDGESVAGAVADVVGDRVYSAAAGLGAHVSDGAGRQPLQCAAVDDVSMALL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHH GTGFGYARQRRAAQAALLARMLPVVRDVRRIGSAALDLCMVAAGRLDAYYEHGLKVWDRA HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGALIAAEAGARVVLPAPDGDGAGLVLAAAPGIADELLAVLERFDGLDPILD HCEEEEECCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MMPSDDELVRLRSVAETLAAEAAAFVRRRRAEVFGTEPGGASAPDGGAVRSKSTPTDPVT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEE VVDTETERLLRDRLAQLRPGEPILGEEGGGPAEPSPPGDGTVTWVLDPIDGTVNFVYGIP EEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCH AYAVSVGAQVDGESVAGAVADVVGDRVYSAAAGLGAHVSDGAGRQPLQCAAVDDVSMALL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHH GTGFGYARQRRAAQAALLARMLPVVRDVRRIGSAALDLCMVAAGRLDAYYEHGLKVWDRA HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGALIAAEAGARVVLPAPDGDGAGLVLAAAPGIADELLAVLERFDGLDPILD HCEEEEECCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]