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The map label for this gene is clpX'

Identifier: 41408885

GI number: 41408885

Start: 3118153

End: 3118905

Strand: Direct

Name: clpX'

Synonym: MAP2787

Alternate gene names: NA

Gene position: 3118153-3118905 (Clockwise)

Preceding gene: 41408882

Following gene: 41408886

Centisome position: 64.56

GC content: 72.38

Gene sequence:

>753_bases
ATGTCCGAGCCCATCCGCATCGTCCACCCGGTCCGCCTCGACGAGCTGATCGACGCCATCAAAACCACCCACCCCGACGT
GCTGGACCAGCTGGCCGACGCCGTGCTGGCGGCCGAGCACCTGGGCGAGGTGGCCGACCACCTGATCGGCCACTTCGTGG
ACCAGGCCCGCCGCTCCGGGGCGTCGTGGACGGACATCGGCAAGAGCATGGGCGTCAGCAAACAGGCCGCGCAGAAGCGC
TTCGTCCCGCGCGAGGCCACCATCCTGGATCCCGGGCAGGGCTTCCAGCGGTTCACCCCGCGGGCGCGCGGCGCGGTGGT
GGCGGCCCAGAACGCCGCCCACCAGGCCGGCAACCGCGAGATCACCCCGGATCACCTGCTGATCGGTGTGCTCAGCGACC
CGGCCGCGCTGGCGACGGTGCTGCTGCGCCTGCAGCACGTCGACACCGACGCCCTGCGCGACGCCGCGACCGCCGCGATC
GCCGCGCTGCGCGCCGACGGTGACCCGCCGGCGCTGATCCCGTTCAGCGGGCCGGCCCGCAAGGTGCTCGAACTGACCGT
GCGCGAGGCGCTGCGGCTCGGCCACAACTACGTCGGCACCGAGCACCAGTTGCTGGCACTGCTGGAGCTCGAGGACGGCG
ACGGGCCGCTGCACCGCGGCGGCGTCGACAAGGAGCGGGTCGAGGTCGATCTGATCCGGGCGCTGGAATCACTGGGCAAC
GGCAAGAACGTCGGCGCCGGCGAAGACGGTTGA

Upstream 100 bases:

>100_bases
GCACGGAGCAAACCGCATCCTTTCCCCGGACGGCCCCCGAAACCCCGGGGCGTCAACCGCGGGTTGACACCACCGCCAGC
GTCAACCTAACGTTGACGGC

Downstream 100 bases:

>100_bases
CCCTCCCTTCGGCGCGACGGTGTGTGCGATCATGCGAGGATGCGTCGTTGGCTGAGGGTCGTGTCCGCCTTCCTCATCGG
CTTCCCGGTTGCGGCGGCCG

Product: ClpX'

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MSEPIRIVHPVRLDELIDAIKTTHPDVLDQLADAVLAAEHLGEVADHLIGHFVDQARRSGASWTDIGKSMGVSKQAAQKR
FVPREATILDPGQGFQRFTPRARGAVVAAQNAAHQAGNREITPDHLLIGVLSDPAALATVLLRLQHVDTDALRDAATAAI
AALRADGDPPALIPFSGPARKVLELTVREALRLGHNYVGTEHQLLALLELEDGDGPLHRGGVDKERVEVDLIRALESLGN
GKNVGAGEDG

Sequences:

>Translated_250_residues
MSEPIRIVHPVRLDELIDAIKTTHPDVLDQLADAVLAAEHLGEVADHLIGHFVDQARRSGASWTDIGKSMGVSKQAAQKR
FVPREATILDPGQGFQRFTPRARGAVVAAQNAAHQAGNREITPDHLLIGVLSDPAALATVLLRLQHVDTDALRDAATAAI
AALRADGDPPALIPFSGPARKVLELTVREALRLGHNYVGTEHQLLALLELEDGDGPLHRGGVDKERVEVDLIRALESLGN
GKNVGAGEDG
>Mature_249_residues
SEPIRIVHPVRLDELIDAIKTTHPDVLDQLADAVLAAEHLGEVADHLIGHFVDQARRSGASWTDIGKSMGVSKQAAQKRF
VPREATILDPGQGFQRFTPRARGAVVAAQNAAHQAGNREITPDHLLIGVLSDPAALATVLLRLQHVDTDALRDAATAAIA
ALRADGDPPALIPFSGPARKVLELTVREALRLGHNYVGTEHQLLALLELEDGDGPLHRGGVDKERVEVDLIRALESLGNG
KNVGAGEDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the clpA/clpB family. ClpC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004176
- InterPro:   IPR023150 [H]

Pfam domain/function: PF02861 Clp_N [H]

EC number: NA

Molecular weight: Translated: 26665; Mature: 26533

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPIRIVHPVRLDELIDAIKTTHPDVLDQLADAVLAAEHLGEVADHLIGHFVDQARRSG
CCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ASWTDIGKSMGVSKQAAQKRFVPREATILDPGQGFQRFTPRARGAVVAAQNAAHQAGNRE
CCHHHHHHHCCCCHHHHHHHCCCCCCEEECCCCCHHHHCCCCCCEEEEECHHHHHCCCCC
ITPDHLLIGVLSDPAALATVLLRLQHVDTDALRDAATAAIAALRADGDPPALIPFSGPAR
CCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHH
KVLELTVREALRLGHNYVGTEHQLLALLELEDGDGPLHRGGVDKERVEVDLIRALESLGN
HHHHHHHHHHHHHCCCCCCCHHHEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
GKNVGAGEDG
CCCCCCCCCC
>Mature Secondary Structure 
SEPIRIVHPVRLDELIDAIKTTHPDVLDQLADAVLAAEHLGEVADHLIGHFVDQARRSG
CCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ASWTDIGKSMGVSKQAAQKRFVPREATILDPGQGFQRFTPRARGAVVAAQNAAHQAGNRE
CCHHHHHHHCCCCHHHHHHHCCCCCCEEECCCCCHHHHCCCCCCEEEEECHHHHHCCCCC
ITPDHLLIGVLSDPAALATVLLRLQHVDTDALRDAATAAIAALRADGDPPALIPFSGPAR
CCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHH
KVLELTVREALRLGHNYVGTEHQLLALLELEDGDGPLHRGGVDKERVEVDLIRALESLGN
HHHHHHHHHHHHHCCCCCCCHHHEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
GKNVGAGEDG
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]