| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is yeaB [H]
Identifier: 41408882
GI number: 41408882
Start: 3115237
End: 3116487
Strand: Direct
Name: yeaB [H]
Synonym: MAP2784
Alternate gene names: 41408882
Gene position: 3115237-3116487 (Clockwise)
Preceding gene: 41408881
Following gene: 41408885
Centisome position: 64.5
GC content: 72.18
Gene sequence:
>1251_bases ATGCACGTGATCAACGGGGTCCGCGACCCGGCGGCCAGCTTTCCCCTCGACACCGCGACCGACGACGCCGGTGAGCGCCG GCAAGCCAACCGGGCCGTCGCCGTCAGCGCCGCCGGCCTGGCGCTGACCGGGCTGGTCGAACTGGTCATCGCGGTGGTGT CGGGTTCGGTGGCGCTGCTCGGCGATGCGCTGCACAACCTGTCCGACGTCTCGACCAGCGCCCTGGTGTTCGTCGGCTTC CGCGCGTCGCGCAAGCTCCCGACCGAGCGCTACCCCTACGGCTACGAACGCGCCGAGGACCTGGCCGGCATCGGGGTGGC CCTGGTGATCTGGGGCAGCGCCGTGGTCGCCGGCTTCGAGAGCGTCACCAAACTGCTGCGGCACGGCGGCACCGGACACG TCGGCTGGGGCATCGCCGCCGCGGTCGTCGGGGTCGTCGGCAACCAGCTGGTGGCCCGCTACAAACTGGTGGTAGGCAGG CGAATTCGGTCGGCAACCATGGTGGCCGACGCCAAGCATTCGTGGCTGGACGCACTCTCGTCGGCCGGGGCGGTGCTGGG TCTGATCGGCGTGGCGCTCGGCTGGGGCTGGGCCGACGCGGTCGCCGGGATCGTCGTCACCGGGTTCATCTGCCACGTCG GCTGGGAGGTGACCGCCGACATCGCGCATCGCCTGCTCGACGGCGTCGACCCCGACATCGTCACCACCGCCGAGGCCGTC GCCGTCTCGGTACCCGGTGTGACGCACGCGCACGCCCGGGCCCGGTGGACCGGGCGGACCCTGCGGGTCGAGGTGGAGGG GTTCCTGGATGCCGCCACGTCCCTGTCGGACTCCGATCGCATCGGCCGCAGCGTCGCCGCGCCCTGGCCCCGCGGCTGCC GCAGATGCAGAGCTTCACCTGGACGGCACGCGCGGCCTGAAAATCCCAGCAGGCCAGCCGGTTTCGAGGTCAGCCCCGGC CGAAGCGCTCGCGCAGCTGCGGGTCGTTCTCCCACCACAGGCCCGACGCGGCGGCGCCGCCGGCATCGTGTGACTCGGCC TCGTCGAGTTCGGCGTCGACCGCGACGGCGTGCGCCCGCTCGTCGCGGGACATGGCCCGCATCAGCAGCAGCACGAACGG CCACCCGACCAGATCCCCGAGGATCCACAGCACACCGGCGCCGATGGTTTGGTCCAGCCGCGGGTCGGGGCCCCAGACCC GGTGCAGCCCAGCGTAATACGACGCACCGATCAGCGATCCCTGCCAGATGA
Upstream 100 bases:
>100_bases GTGGCGCCGTCCGGTAGCCGCGGCCGTGCCCGCCGATCGCCATCACGTGTCCGGGACCGCGGCACTTGAGCGGCGCTGCC GAGTGGGGCATGCTGGCCGT
Downstream 100 bases:
>100_bases CCAGCCCCAGCAGCCCGTCGCCGAGCGCCTCCACCACGGTGATCAGCAGCGAGATCGACTGCGGGTAGCGGCGCGGCACC GGGTCCTCCTGCAGGCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MHVINGVRDPAASFPLDTATDDAGERRQANRAVAVSAAGLALTGLVELVIAVVSGSVALLGDALHNLSDVSTSALVFVGF RASRKLPTERYPYGYERAEDLAGIGVALVIWGSAVVAGFESVTKLLRHGGTGHVGWGIAAAVVGVVGNQLVARYKLVVGR RIRSATMVADAKHSWLDALSSAGAVLGLIGVALGWGWADAVAGIVVTGFICHVGWEVTADIAHRLLDGVDPDIVTTAEAV AVSVPGVTHAHARARWTGRTLRVEVEGFLDAATSLSDSDRIGRSVAAPWPRGCRRCRASPGRHARPENPSRPAGFEVSPG RSARAAAGRSPTTGPTRRRRRHRVTRPRRVRRRPRRRAPARRGTWPASAAARTATRPDPRGSTAHRRRWFGPAAGRGPRP GAAQRNTTHRSAIPAR
Sequences:
>Translated_416_residues MHVINGVRDPAASFPLDTATDDAGERRQANRAVAVSAAGLALTGLVELVIAVVSGSVALLGDALHNLSDVSTSALVFVGF RASRKLPTERYPYGYERAEDLAGIGVALVIWGSAVVAGFESVTKLLRHGGTGHVGWGIAAAVVGVVGNQLVARYKLVVGR RIRSATMVADAKHSWLDALSSAGAVLGLIGVALGWGWADAVAGIVVTGFICHVGWEVTADIAHRLLDGVDPDIVTTAEAV AVSVPGVTHAHARARWTGRTLRVEVEGFLDAATSLSDSDRIGRSVAAPWPRGCRRCRASPGRHARPENPSRPAGFEVSPG RSARAAAGRSPTTGPTRRRRRHRVTRPRRVRRRPRRRAPARRGTWPASAAARTATRPDPRGSTAHRRRWFGPAAGRGPRP GAAQRNTTHRSAIPAR >Mature_416_residues MHVINGVRDPAASFPLDTATDDAGERRQANRAVAVSAAGLALTGLVELVIAVVSGSVALLGDALHNLSDVSTSALVFVGF RASRKLPTERYPYGYERAEDLAGIGVALVIWGSAVVAGFESVTKLLRHGGTGHVGWGIAAAVVGVVGNQLVARYKLVVGR RIRSATMVADAKHSWLDALSSAGAVLGLIGVALGWGWADAVAGIVVTGFICHVGWEVTADIAHRLLDGVDPDIVTTAEAV AVSVPGVTHAHARARWTGRTLRVEVEGFLDAATSLSDSDRIGRSVAAPWPRGCRRCRASPGRHARPENPSRPAGFEVSPG RSARAAAGRSPTTGPTRRRRRHRVTRPRRVRRRPRRRAPARRGTWPASAAARTATRPDPRGSTAHRRRWFGPAAGRGPRP GAAQRNTTHRSAIPAR
Specific function: Unknown
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]
Homologues:
Organism=Escherichia coli, GI1790349, Length=272, Percent_Identity=24.6323529411765, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 44052; Mature: 44052
Theoretical pI: Translated: 12.23; Mature: 12.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVINGVRDPAASFPLDTATDDAGERRQANRAVAVSAAGLALTGLVELVIAVVSGSVALL CCCCCCCCCCHHCCCCCCCCCCCHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHH GDALHNLSDVSTSALVFVGFRASRKLPTERYPYGYERAEDLAGIGVALVIWGSAVVAGFE HHHHHHHHHHCCCEEEEEEEHHCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHH SVTKLLRHGGTGHVGWGIAAAVVGVVGNQLVARYKLVVGRRIRSATMVADAKHSWLDALS HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAGAVLGLIGVALGWGWADAVAGIVVTGFICHVGWEVTADIAHRLLDGVDPDIVTTAEAV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHH AVSVPGVTHAHARARWTGRTLRVEVEGFLDAATSLSDSDRIGRSVAAPWPRGCRRCRASP EEECCCCHHHHHHHEECCCEEEEEHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHCCCC GRHARPENPSRPAGFEVSPGRSARAAAGRSPTTGPTRRRRRHRVTRPRRVRRRPRRRAPA CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHCHHHCCCC RRGTWPASAAARTATRPDPRGSTAHRRRWFGPAAGRGPRPGAAQRNTTHRSAIPAR CCCCCCCHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHVINGVRDPAASFPLDTATDDAGERRQANRAVAVSAAGLALTGLVELVIAVVSGSVALL CCCCCCCCCCHHCCCCCCCCCCCHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHH GDALHNLSDVSTSALVFVGFRASRKLPTERYPYGYERAEDLAGIGVALVIWGSAVVAGFE HHHHHHHHHHCCCEEEEEEEHHCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHH SVTKLLRHGGTGHVGWGIAAAVVGVVGNQLVARYKLVVGRRIRSATMVADAKHSWLDALS HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAGAVLGLIGVALGWGWADAVAGIVVTGFICHVGWEVTADIAHRLLDGVDPDIVTTAEAV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHH AVSVPGVTHAHARARWTGRTLRVEVEGFLDAATSLSDSDRIGRSVAAPWPRGCRRCRASP EEECCCCHHHHHHHEECCCEEEEEHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHCCCC GRHARPENPSRPAGFEVSPGRSARAAAGRSPTTGPTRRRRRHRVTRPRRVRRRPRRRAPA CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHCHHHCCCC RRGTWPASAAARTATRPDPRGSTAHRRRWFGPAAGRGPRPGAAQRNTTHRSAIPAR CCCCCCCHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377; 8951816 [H]