| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408869
Identifier: 41408869
GI number: 41408869
Start: 3102455
End: 3103732
Strand: Reverse
Name: 41408869
Synonym: MAP2771c
Alternate gene names: NA
Gene position: 3103732-3102455 (Counterclockwise)
Preceding gene: 41408870
Following gene: 41408867
Centisome position: 64.26
GC content: 70.27
Gene sequence:
>1278_bases ATGACCGACGTGGACCCCTACATCATCATCTCCGCGGACACCCACGCCGAGCTGCCGACCGAGCGCTACCGCGAATACGT CGACCCCGAATACCGGGAGGACTTCGAGACGTATCTGGCGGAGAAGACGGCCGCGGCGCAGGCCGGCGGGTTCATCGACG AGGAGTTCGCGCAGGAGTGGTTCTCCGAGCACGGCGAGGGCATCGCCGGCGGGTGGGATGTGGCGTTGCGGGACAAGGAA CTTGACGGCGACGGGGTGGTCGGCGAGGTCATCTTTCCCGACGCCGACGCGGTGACCGGGGTGGCCGGCGCCCCGTTCGG GGCCGGCCTGGGCCAGTCGGGCGACCTCGACCCGGGCCGGGCGATGGCCGGGGCGCGGGCGCACAACCGCTGGCTGGCCG AGCTGTGCAGCCATAGTCCCGAGCGGCGGGCCGGGGTCGCGGTGGTGCCGATCCTGGCCGACGTGGACGCGGCGGTCGCC GAGATCACCCGCGCGGCCGAGTCGGGGTTGCGGGGCGGGATCCTGATCCCGGCGCGCTGGGTCGGCTACCCGCCGTATCA CGACCGTCGCTACGACAAGGTCTGGGCCGCCTGCCAAGACCTGCAGATGCCGGTGCACACCCATTCCGGTCCCGCGCCGC AGGAGGAGTACGGGGGCCATCTGGGCATCTATGTCACCGAGGTGCGGTGGTGGGGGGCGCGGCCGCTGTGGTTCGCGTTG TGGTCGGGCGTGTTCGAGCGTTTCCCGGGCCTGCGCTGGGGGGTGACGGAGTGCGGCGCGTTCTGGGCCAACGATCTGCT GTGGCTGATGGACACCCGGTATCTGCGTGAGCATTCGGCCAAGAAGATGAGCCATCTGATGGAGGGCGACCTGACCATGC CGCCCTCGGCGTACTTCGACCGGAACTGTTTCATCGGCGCCACCACCACCGAGCGCAGGGAGCTGGCCCGGCGCTACGAG ATCGGCGTGTCGAACATCTTGTGGGGCAACGACTTTCCGCACCCGGAAGGAACCTGGCCGCATACCCGCGACTGGCTGCG GCGCTCGTTCTGGGACATTCCCGTCGAGGAGACCCGCCAGATGCTGGGCTTGGCCGCCGCCGAGCTGTACAACTTCGACC TGGGCGCGCTGGCCCCGCTGGCCGCGCGCATCGGCCCGGTTCCCGCGGACCTGGGCCAAGACGATGCGGTGAGCATTCCC AAGTGGGAGGCGGCCCGCCGGACCGGACGGCACTGGCTGACCGACGCGGAGCCCATGCCCGATCTGGTGCAGAGCTGA
Upstream 100 bases:
>100_bases GGCCGAGGTCGCCGAGCCGCTGGCGGCCGTGCCCGCCGACGCGAGCAGCACCGTCTTCGAGCCCGACCCCATCCGCACCT GGTAAGCGAAAGGACTCTCA
Downstream 100 bases:
>100_bases ACGCGGCTCAGGTGTGGACTTTCCAGCCGGCCAGCGGGGTGGGGGCGGCCGGCGCGTCGGGGTCGTTGAACTCGATGTAG ACATCGCCCTGGCGGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Amidase; Hydrolase; Barh Protein; Aminocarboxymuconate-Semialdehyde Decarboxylase; Amidohydrolase Family; TIM-Barrel Fold Metal-Dependent Hydrolase; Minocarboxymuconate-Semialdehyde Decarboxylase.; Metal-Dependent Amidohydrolase; Amidohydrolase 2 Protein
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MTDVDPYIIISADTHAELPTERYREYVDPEYREDFETYLAEKTAAAQAGGFIDEEFAQEWFSEHGEGIAGGWDVALRDKE LDGDGVVGEVIFPDADAVTGVAGAPFGAGLGQSGDLDPGRAMAGARAHNRWLAELCSHSPERRAGVAVVPILADVDAAVA EITRAAESGLRGGILIPARWVGYPPYHDRRYDKVWAACQDLQMPVHTHSGPAPQEEYGGHLGIYVTEVRWWGARPLWFAL WSGVFERFPGLRWGVTECGAFWANDLLWLMDTRYLREHSAKKMSHLMEGDLTMPPSAYFDRNCFIGATTTERRELARRYE IGVSNILWGNDFPHPEGTWPHTRDWLRRSFWDIPVEETRQMLGLAAAELYNFDLGALAPLAARIGPVPADLGQDDAVSIP KWEAARRTGRHWLTDAEPMPDLVQS
Sequences:
>Translated_425_residues MTDVDPYIIISADTHAELPTERYREYVDPEYREDFETYLAEKTAAAQAGGFIDEEFAQEWFSEHGEGIAGGWDVALRDKE LDGDGVVGEVIFPDADAVTGVAGAPFGAGLGQSGDLDPGRAMAGARAHNRWLAELCSHSPERRAGVAVVPILADVDAAVA EITRAAESGLRGGILIPARWVGYPPYHDRRYDKVWAACQDLQMPVHTHSGPAPQEEYGGHLGIYVTEVRWWGARPLWFAL WSGVFERFPGLRWGVTECGAFWANDLLWLMDTRYLREHSAKKMSHLMEGDLTMPPSAYFDRNCFIGATTTERRELARRYE IGVSNILWGNDFPHPEGTWPHTRDWLRRSFWDIPVEETRQMLGLAAAELYNFDLGALAPLAARIGPVPADLGQDDAVSIP KWEAARRTGRHWLTDAEPMPDLVQS >Mature_424_residues TDVDPYIIISADTHAELPTERYREYVDPEYREDFETYLAEKTAAAQAGGFIDEEFAQEWFSEHGEGIAGGWDVALRDKEL DGDGVVGEVIFPDADAVTGVAGAPFGAGLGQSGDLDPGRAMAGARAHNRWLAELCSHSPERRAGVAVVPILADVDAAVAE ITRAAESGLRGGILIPARWVGYPPYHDRRYDKVWAACQDLQMPVHTHSGPAPQEEYGGHLGIYVTEVRWWGARPLWFALW SGVFERFPGLRWGVTECGAFWANDLLWLMDTRYLREHSAKKMSHLMEGDLTMPPSAYFDRNCFIGATTTERRELARRYEI GVSNILWGNDFPHPEGTWPHTRDWLRRSFWDIPVEETRQMLGLAAAELYNFDLGALAPLAARIGPVPADLGQDDAVSIPK WEAARRTGRHWLTDAEPMPDLVQS
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47404; Mature: 47273
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDVDPYIIISADTHAELPTERYREYVDPEYREDFETYLAEKTAAAQAGGFIDEEFAQEW CCCCCCEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH FSEHGEGIAGGWDVALRDKELDGDGVVGEVIFPDADAVTGVAGAPFGAGLGQSGDLDPGR HHHCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCHHH AMAGARAHNRWLAELCSHSPERRAGVAVVPILADVDAAVAEITRAAESGLRGGILIPARW HHHHHHHHHHHHHHHHCCCCCHHCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEECHHH VGYPPYHDRRYDKVWAACQDLQMPVHTHSGPAPQEEYGGHLGIYVTEVRWWGARPLWFAL CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEEEEEEEEECCCCHHHHHH WSGVFERFPGLRWGVTECGAFWANDLLWLMDTRYLREHSAKKMSHLMEGDLTMPPSAYFD HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCC RNCFIGATTTERRELARRYEIGVSNILWGNDFPHPEGTWPHTRDWLRRSFWDIPVEETRQ CCEEEECCCHHHHHHHHHHHCCHHHEECCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHH MLGLAAAELYNFDLGALAPLAARIGPVPADLGQDDAVSIPKWEAARRTGRHWLTDAEPMP HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCH DLVQS HHHCC >Mature Secondary Structure TDVDPYIIISADTHAELPTERYREYVDPEYREDFETYLAEKTAAAQAGGFIDEEFAQEW CCCCCEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH FSEHGEGIAGGWDVALRDKELDGDGVVGEVIFPDADAVTGVAGAPFGAGLGQSGDLDPGR HHHCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCHHH AMAGARAHNRWLAELCSHSPERRAGVAVVPILADVDAAVAEITRAAESGLRGGILIPARW HHHHHHHHHHHHHHHHCCCCCHHCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEECHHH VGYPPYHDRRYDKVWAACQDLQMPVHTHSGPAPQEEYGGHLGIYVTEVRWWGARPLWFAL CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEEEEEEEEECCCCHHHHHH WSGVFERFPGLRWGVTECGAFWANDLLWLMDTRYLREHSAKKMSHLMEGDLTMPPSAYFD HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCC RNCFIGATTTERRELARRYEIGVSNILWGNDFPHPEGTWPHTRDWLRRSFWDIPVEETRQ CCEEEECCCHHHHHHHHHHHCCHHHEECCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHH MLGLAAAELYNFDLGALAPLAARIGPVPADLGQDDAVSIPKWEAARRTGRHWLTDAEPMP HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCH DLVQS HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA