| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408870
Identifier: 41408870
GI number: 41408870
Start: 3103748
End: 3104962
Strand: Reverse
Name: 41408870
Synonym: MAP2772c
Alternate gene names: NA
Gene position: 3104962-3103748 (Counterclockwise)
Preceding gene: 41408871
Following gene: 41408869
Centisome position: 64.29
GC content: 70.7
Gene sequence:
>1215_bases ATGGACCGCTACACCGTCATCTCGGCCGACTGCCACGCCGGCGCGGACCTGCTCGACTACCGCGACTACCTGGATCCGCA GTACCGCGACGAATTCGACGGCTGGGCAAAGACTTACGTGAACCCGTTCGGCGACCTGAGCGAGCCCGACGCCGAGCGCA ACTGGAACAGCGCGCGGCGCAACTGTGAGCTGGACACCGAAGGCATTGCGGGAGAGGTGATTTACCCCAACACCGTGCCG CCGTTCTTTCCGCACGCCAGCCTGGCCGCCCCGCCGCCGGAGACTGCGCGGGAGCTCGAGCTGCGCTGGGCCGGGCTGCG CGCCCACAACCGCTGGCTGGCCGACTTCTGTTCGCTGTCACCCGAGCGGCGCGCCGGAGTAGGGCAGATCCTGCTGGGGG ACTTGGACGAAGCCGTTGCGGAGGTGGGGCAGATCGCCAAACTCGGCCTGCGCGGCGGAGTGTTGCTGCCCGGGATCGCC CCCGGCACCGGCATCCCGCCGCTGTACGCCGAGCACTGGGAGCCGCTGTGGGCGGCGTGCGCGGAGGCCGGGGTGGTGGT CAACCACCACGGCGGCAACGCCGGGCCGAGCCCGACCGACGGGTGGGGCAGCTCGTTCGCCGTCTGGGTGTACGAGACGC ACTGGTGGGCGCATCGGGCGTTGTGGCACTTGATCTTCAGCGGCGCACTGGACCGGCATCCCGACCTCACCGTGGTGTTC ACCGAGCAGGGCGCCGGGTGGATACCGGCGACGCTGGCCTCGCTGGACGTGGCCGCGGCCCGCTACGCGCGAGCGAACTC GGCGATCGCCCGGTTCGCCGGTCCCACCGCCGGTTCGCTTTCGCTCAAGCCGAGCCAGTACTGGGCCCGCCAGTGTTACG TCGGCGCGAGTTTCATGCGCCCGGTCGAGTGCGCCGAGCGGCACGGAATCGGTGTTGAGAAGGTCATGTGGGGCAGCGAC TACCCGCACTACGAGGGGACCGCCCCCTACACGCGAGAAGCGTTGCGGCACACCTTTAGTGACGTTCCGCCCGACGAGGT GGCCGCCATGGTGGGCGGGAACGCGGCGAGGGTGTACGGCTTCGACCTCGACGCGCTGGCGCCGCTGGTGGACCGGATCG GCCCGAGCGTGGCCGAGGTCGCCGAGCCGCTGGCGGCCGTGCCCGCCGACGCGAGCAGCACCGTCTTCGAGCCCGACCCC ATCCGCACCTGGTAA
Upstream 100 bases:
>100_bases GCGGGTGCCGCAGGAGTGGCTGCTGCCCTACGTCCACCAGCGCTACGACGACGTGGCCCTGCTGGCCGCCCCGCGGCCCG AACCGGCGCGGGCGTAGCGC
Downstream 100 bases:
>100_bases GCGAAAGGACTCTCAATGACCGACGTGGACCCCTACATCATCATCTCCGCGGACACCCACGCCGAGCTGCCGACCGAGCG CTACCGCGAATACGTCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Amidase; Hydrolase; Barh Protein; Aminocarboxymuconate-Semialdehyde Decarboxylase; Amidohydrolase Family; Metal-Dependent Amidohydrolase
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MDRYTVISADCHAGADLLDYRDYLDPQYRDEFDGWAKTYVNPFGDLSEPDAERNWNSARRNCELDTEGIAGEVIYPNTVP PFFPHASLAAPPPETARELELRWAGLRAHNRWLADFCSLSPERRAGVGQILLGDLDEAVAEVGQIAKLGLRGGVLLPGIA PGTGIPPLYAEHWEPLWAACAEAGVVVNHHGGNAGPSPTDGWGSSFAVWVYETHWWAHRALWHLIFSGALDRHPDLTVVF TEQGAGWIPATLASLDVAAARYARANSAIARFAGPTAGSLSLKPSQYWARQCYVGASFMRPVECAERHGIGVEKVMWGSD YPHYEGTAPYTREALRHTFSDVPPDEVAAMVGGNAARVYGFDLDALAPLVDRIGPSVAEVAEPLAAVPADASSTVFEPDP IRTW
Sequences:
>Translated_404_residues MDRYTVISADCHAGADLLDYRDYLDPQYRDEFDGWAKTYVNPFGDLSEPDAERNWNSARRNCELDTEGIAGEVIYPNTVP PFFPHASLAAPPPETARELELRWAGLRAHNRWLADFCSLSPERRAGVGQILLGDLDEAVAEVGQIAKLGLRGGVLLPGIA PGTGIPPLYAEHWEPLWAACAEAGVVVNHHGGNAGPSPTDGWGSSFAVWVYETHWWAHRALWHLIFSGALDRHPDLTVVF TEQGAGWIPATLASLDVAAARYARANSAIARFAGPTAGSLSLKPSQYWARQCYVGASFMRPVECAERHGIGVEKVMWGSD YPHYEGTAPYTREALRHTFSDVPPDEVAAMVGGNAARVYGFDLDALAPLVDRIGPSVAEVAEPLAAVPADASSTVFEPDP IRTW >Mature_404_residues MDRYTVISADCHAGADLLDYRDYLDPQYRDEFDGWAKTYVNPFGDLSEPDAERNWNSARRNCELDTEGIAGEVIYPNTVP PFFPHASLAAPPPETARELELRWAGLRAHNRWLADFCSLSPERRAGVGQILLGDLDEAVAEVGQIAKLGLRGGVLLPGIA PGTGIPPLYAEHWEPLWAACAEAGVVVNHHGGNAGPSPTDGWGSSFAVWVYETHWWAHRALWHLIFSGALDRHPDLTVVF TEQGAGWIPATLASLDVAAARYARANSAIARFAGPTAGSLSLKPSQYWARQCYVGASFMRPVECAERHGIGVEKVMWGSD YPHYEGTAPYTREALRHTFSDVPPDEVAAMVGGNAARVYGFDLDALAPLVDRIGPSVAEVAEPLAAVPADASSTVFEPDP IRTW
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43940; Mature: 43940
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRYTVISADCHAGADLLDYRDYLDPQYRDEFDGWAKTYVNPFGDLSEPDAERNWNSARR CCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH NCELDTEGIAGEVIYPNTVPPFFPHASLAAPPPETARELELRWAGLRAHNRWLADFCSLS CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCC PERRAGVGQILLGDLDEAVAEVGQIAKLGLRGGVLLPGIAPGTGIPPLYAEHWEPLWAAC CHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHCCHHHHHH AEAGVVVNHHGGNAGPSPTDGWGSSFAVWVYETHWWAHRALWHLIFSGALDRHPDLTVVF HHCCEEEEECCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCEEEEE TEQGAGWIPATLASLDVAAARYARANSAIARFAGPTAGSLSLKPSQYWARQCYVGASFMR ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHCHHHHC PVECAERHGIGVEKVMWGSDYPHYEGTAPYTREALRHTFSDVPPDEVAAMVGGNAARVYG HHHHHHHCCCCHHEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEE FDLDALAPLVDRIGPSVAEVAEPLAAVPADASSTVFEPDPIRTW CCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDRYTVISADCHAGADLLDYRDYLDPQYRDEFDGWAKTYVNPFGDLSEPDAERNWNSARR CCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH NCELDTEGIAGEVIYPNTVPPFFPHASLAAPPPETARELELRWAGLRAHNRWLADFCSLS CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCC PERRAGVGQILLGDLDEAVAEVGQIAKLGLRGGVLLPGIAPGTGIPPLYAEHWEPLWAAC CHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHCCHHHHHH AEAGVVVNHHGGNAGPSPTDGWGSSFAVWVYETHWWAHRALWHLIFSGALDRHPDLTVVF HHCCEEEEECCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCEEEEE TEQGAGWIPATLASLDVAAARYARANSAIARFAGPTAGSLSLKPSQYWARQCYVGASFMR ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHCHHHHC PVECAERHGIGVEKVMWGSDYPHYEGTAPYTREALRHTFSDVPPDEVAAMVGGNAARVYG HHHHHHHCCCCHHEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEE FDLDALAPLVDRIGPSVAEVAEPLAAVPADASSTVFEPDPIRTW CCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA