Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408870

Identifier: 41408870

GI number: 41408870

Start: 3103748

End: 3104962

Strand: Reverse

Name: 41408870

Synonym: MAP2772c

Alternate gene names: NA

Gene position: 3104962-3103748 (Counterclockwise)

Preceding gene: 41408871

Following gene: 41408869

Centisome position: 64.29

GC content: 70.7

Gene sequence:

>1215_bases
ATGGACCGCTACACCGTCATCTCGGCCGACTGCCACGCCGGCGCGGACCTGCTCGACTACCGCGACTACCTGGATCCGCA
GTACCGCGACGAATTCGACGGCTGGGCAAAGACTTACGTGAACCCGTTCGGCGACCTGAGCGAGCCCGACGCCGAGCGCA
ACTGGAACAGCGCGCGGCGCAACTGTGAGCTGGACACCGAAGGCATTGCGGGAGAGGTGATTTACCCCAACACCGTGCCG
CCGTTCTTTCCGCACGCCAGCCTGGCCGCCCCGCCGCCGGAGACTGCGCGGGAGCTCGAGCTGCGCTGGGCCGGGCTGCG
CGCCCACAACCGCTGGCTGGCCGACTTCTGTTCGCTGTCACCCGAGCGGCGCGCCGGAGTAGGGCAGATCCTGCTGGGGG
ACTTGGACGAAGCCGTTGCGGAGGTGGGGCAGATCGCCAAACTCGGCCTGCGCGGCGGAGTGTTGCTGCCCGGGATCGCC
CCCGGCACCGGCATCCCGCCGCTGTACGCCGAGCACTGGGAGCCGCTGTGGGCGGCGTGCGCGGAGGCCGGGGTGGTGGT
CAACCACCACGGCGGCAACGCCGGGCCGAGCCCGACCGACGGGTGGGGCAGCTCGTTCGCCGTCTGGGTGTACGAGACGC
ACTGGTGGGCGCATCGGGCGTTGTGGCACTTGATCTTCAGCGGCGCACTGGACCGGCATCCCGACCTCACCGTGGTGTTC
ACCGAGCAGGGCGCCGGGTGGATACCGGCGACGCTGGCCTCGCTGGACGTGGCCGCGGCCCGCTACGCGCGAGCGAACTC
GGCGATCGCCCGGTTCGCCGGTCCCACCGCCGGTTCGCTTTCGCTCAAGCCGAGCCAGTACTGGGCCCGCCAGTGTTACG
TCGGCGCGAGTTTCATGCGCCCGGTCGAGTGCGCCGAGCGGCACGGAATCGGTGTTGAGAAGGTCATGTGGGGCAGCGAC
TACCCGCACTACGAGGGGACCGCCCCCTACACGCGAGAAGCGTTGCGGCACACCTTTAGTGACGTTCCGCCCGACGAGGT
GGCCGCCATGGTGGGCGGGAACGCGGCGAGGGTGTACGGCTTCGACCTCGACGCGCTGGCGCCGCTGGTGGACCGGATCG
GCCCGAGCGTGGCCGAGGTCGCCGAGCCGCTGGCGGCCGTGCCCGCCGACGCGAGCAGCACCGTCTTCGAGCCCGACCCC
ATCCGCACCTGGTAA

Upstream 100 bases:

>100_bases
GCGGGTGCCGCAGGAGTGGCTGCTGCCCTACGTCCACCAGCGCTACGACGACGTGGCCCTGCTGGCCGCCCCGCGGCCCG
AACCGGCGCGGGCGTAGCGC

Downstream 100 bases:

>100_bases
GCGAAAGGACTCTCAATGACCGACGTGGACCCCTACATCATCATCTCCGCGGACACCCACGCCGAGCTGCCGACCGAGCG
CTACCGCGAATACGTCGACC

Product: hypothetical protein

Products: NA

Alternate protein names: Amidohydrolase Family Protein; Amidase; Hydrolase; Barh Protein; Aminocarboxymuconate-Semialdehyde Decarboxylase; Amidohydrolase Family; Metal-Dependent Amidohydrolase

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MDRYTVISADCHAGADLLDYRDYLDPQYRDEFDGWAKTYVNPFGDLSEPDAERNWNSARRNCELDTEGIAGEVIYPNTVP
PFFPHASLAAPPPETARELELRWAGLRAHNRWLADFCSLSPERRAGVGQILLGDLDEAVAEVGQIAKLGLRGGVLLPGIA
PGTGIPPLYAEHWEPLWAACAEAGVVVNHHGGNAGPSPTDGWGSSFAVWVYETHWWAHRALWHLIFSGALDRHPDLTVVF
TEQGAGWIPATLASLDVAAARYARANSAIARFAGPTAGSLSLKPSQYWARQCYVGASFMRPVECAERHGIGVEKVMWGSD
YPHYEGTAPYTREALRHTFSDVPPDEVAAMVGGNAARVYGFDLDALAPLVDRIGPSVAEVAEPLAAVPADASSTVFEPDP
IRTW

Sequences:

>Translated_404_residues
MDRYTVISADCHAGADLLDYRDYLDPQYRDEFDGWAKTYVNPFGDLSEPDAERNWNSARRNCELDTEGIAGEVIYPNTVP
PFFPHASLAAPPPETARELELRWAGLRAHNRWLADFCSLSPERRAGVGQILLGDLDEAVAEVGQIAKLGLRGGVLLPGIA
PGTGIPPLYAEHWEPLWAACAEAGVVVNHHGGNAGPSPTDGWGSSFAVWVYETHWWAHRALWHLIFSGALDRHPDLTVVF
TEQGAGWIPATLASLDVAAARYARANSAIARFAGPTAGSLSLKPSQYWARQCYVGASFMRPVECAERHGIGVEKVMWGSD
YPHYEGTAPYTREALRHTFSDVPPDEVAAMVGGNAARVYGFDLDALAPLVDRIGPSVAEVAEPLAAVPADASSTVFEPDP
IRTW
>Mature_404_residues
MDRYTVISADCHAGADLLDYRDYLDPQYRDEFDGWAKTYVNPFGDLSEPDAERNWNSARRNCELDTEGIAGEVIYPNTVP
PFFPHASLAAPPPETARELELRWAGLRAHNRWLADFCSLSPERRAGVGQILLGDLDEAVAEVGQIAKLGLRGGVLLPGIA
PGTGIPPLYAEHWEPLWAACAEAGVVVNHHGGNAGPSPTDGWGSSFAVWVYETHWWAHRALWHLIFSGALDRHPDLTVVF
TEQGAGWIPATLASLDVAAARYARANSAIARFAGPTAGSLSLKPSQYWARQCYVGASFMRPVECAERHGIGVEKVMWGSD
YPHYEGTAPYTREALRHTFSDVPPDEVAAMVGGNAARVYGFDLDALAPLVDRIGPSVAEVAEPLAAVPADASSTVFEPDP
IRTW

Specific function: Unknown

COG id: COG2159

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43940; Mature: 43940

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRYTVISADCHAGADLLDYRDYLDPQYRDEFDGWAKTYVNPFGDLSEPDAERNWNSARR
CCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
NCELDTEGIAGEVIYPNTVPPFFPHASLAAPPPETARELELRWAGLRAHNRWLADFCSLS
CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCC
PERRAGVGQILLGDLDEAVAEVGQIAKLGLRGGVLLPGIAPGTGIPPLYAEHWEPLWAAC
CHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHCCHHHHHH
AEAGVVVNHHGGNAGPSPTDGWGSSFAVWVYETHWWAHRALWHLIFSGALDRHPDLTVVF
HHCCEEEEECCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCEEEEE
TEQGAGWIPATLASLDVAAARYARANSAIARFAGPTAGSLSLKPSQYWARQCYVGASFMR
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHCHHHHC
PVECAERHGIGVEKVMWGSDYPHYEGTAPYTREALRHTFSDVPPDEVAAMVGGNAARVYG
HHHHHHHCCCCHHEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEE
FDLDALAPLVDRIGPSVAEVAEPLAAVPADASSTVFEPDPIRTW
CCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDRYTVISADCHAGADLLDYRDYLDPQYRDEFDGWAKTYVNPFGDLSEPDAERNWNSARR
CCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
NCELDTEGIAGEVIYPNTVPPFFPHASLAAPPPETARELELRWAGLRAHNRWLADFCSLS
CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCC
PERRAGVGQILLGDLDEAVAEVGQIAKLGLRGGVLLPGIAPGTGIPPLYAEHWEPLWAAC
CHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHCCHHHHHH
AEAGVVVNHHGGNAGPSPTDGWGSSFAVWVYETHWWAHRALWHLIFSGALDRHPDLTVVF
HHCCEEEEECCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCEEEEE
TEQGAGWIPATLASLDVAAARYARANSAIARFAGPTAGSLSLKPSQYWARQCYVGASFMR
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHCHHHHC
PVECAERHGIGVEKVMWGSDYPHYEGTAPYTREALRHTFSDVPPDEVAAMVGGNAARVYG
HHHHHHHCCCCHHEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEE
FDLDALAPLVDRIGPSVAEVAEPLAAVPADASSTVFEPDPIRTW
CCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA