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The map label for this gene is 41408866

Identifier: 41408866

GI number: 41408866

Start: 3098241

End: 3099278

Strand: Reverse

Name: 41408866

Synonym: MAP2768c

Alternate gene names: NA

Gene position: 3099278-3098241 (Counterclockwise)

Preceding gene: 41408867

Following gene: 41408865

Centisome position: 64.17

GC content: 63.97

Gene sequence:

>1038_bases
CTGGCACGTGATGCCGACGCGAAACGGGATAAGCGTGCATTCGGGAACATCAGAAAGTTGCCCTCAGGGCGGTTTCAGGT
CCGCTATACCGGACCTGACGGGAGCTACATCACGGCCCCCAAGACGTTCGCCGCGAAGATCGACGCCGAAGCGTGGCTGA
CCGATCGCCGTCGCGAAATCGATAGGGGACTCTGGGACGTCGCCTCCGCCAAGCAGCCCGAGCGCGTCACCTTTGGCGCG
TACGCCGCGGGCTGGCTCGCGGGGCGCCAGGTCGCCGGCCGGCCGATCAAGGCCCGCACGCGAGAGCACTATCAAGCCAT
CCTCGATGACCATCTCTTGCCAGCGTTTGGGAGTCGTCAGCTCACCTCGATCACCCCGAAAGATGTCCGCGAATGGTACT
CAGGCACTCTGACAAACCGACCCACGATGCGCAGCCACGCCTACAGCCTGTTGCGCACCATCATGGGTAGCGCGGTCAAC
GACGAGCTGATCGACGCCAACCCGTGCCGCATCGTGGGTGCCGGACGGGCCAAGCGCGTCCACAAGATCCGGCCCGCGAC
AGTCGAGGAACTCCCGATCCTTACCGAAGCAATGCCCGAGCGTCTCCGGCTCATGGTCGCACTCGCGAGTTGGTGCGCAC
TCCGATTCGGCGAGACGATCGAATTGCAGCGCGGCGATATCGATCTGGCCGATGAAGTGATTCGGATTCGCCGCGCAGCG
GTACGCACACATGGCGGCACATTCGAAGTCACCACGCCTAAATCTGACGCCGGTATCCGCGACGTCGCAATCCCACCGCA
CCTCGTATCGGCCATCGAAGCACACCTAGCGAAATATGTTGGCAAGAAGCGCGATTCACTGCTATTTCCGAACGAGCGCG
GCAGGCATCTGCAACCGTCTACCCTCAACCGGCATTGGGGTACAAAGCGCGGGCCGCAGCCGGCCGCGACGATTTGCGTT
GGCACGACCTACGGCACTCCGGCGCAGTCCTGGCCGCCGCCACCGGCGCCAGCCTCGCCGAACTCATGGCCCGGCTAG

Upstream 100 bases:

>100_bases
GGAACATGCCGTATGCTCATGTGGCACGTATTTGGCACGGAATGGGGTACTGGGTTCATCCCATTCGACCCGATTGAGGC
GGTCTGAATTGGCACGCAGT

Downstream 100 bases:

>100_bases
GCCATTCGACGCCACAGGCAGCGATGCGCTACCAGCACGCCGCGCAAGGCCGCGACAAACAGATTGCAGCGCTGCTGTCG
AAGATCGCCGAGAACCGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MARDADAKRDKRAFGNIRKLPSGRFQVRYTGPDGSYITAPKTFAAKIDAEAWLTDRRREIDRGLWDVASAKQPERVTFGA
YAAGWLAGRQVAGRPIKARTREHYQAILDDHLLPAFGSRQLTSITPKDVREWYSGTLTNRPTMRSHAYSLLRTIMGSAVN
DELIDANPCRIVGAGRAKRVHKIRPATVEELPILTEAMPERLRLMVALASWCALRFGETIELQRGDIDLADEVIRIRRAA
VRTHGGTFEVTTPKSDAGIRDVAIPPHLVSAIEAHLAKYVGKKRDSLLFPNERGRHLQPSTLNRHWGTKRGPQPAATICV
GTTYGTPAQSWPPPPAPASPNSWPG

Sequences:

>Translated_345_residues
MARDADAKRDKRAFGNIRKLPSGRFQVRYTGPDGSYITAPKTFAAKIDAEAWLTDRRREIDRGLWDVASAKQPERVTFGA
YAAGWLAGRQVAGRPIKARTREHYQAILDDHLLPAFGSRQLTSITPKDVREWYSGTLTNRPTMRSHAYSLLRTIMGSAVN
DELIDANPCRIVGAGRAKRVHKIRPATVEELPILTEAMPERLRLMVALASWCALRFGETIELQRGDIDLADEVIRIRRAA
VRTHGGTFEVTTPKSDAGIRDVAIPPHLVSAIEAHLAKYVGKKRDSLLFPNERGRHLQPSTLNRHWGTKRGPQPAATICV
GTTYGTPAQSWPPPPAPASPNSWPG
>Mature_344_residues
ARDADAKRDKRAFGNIRKLPSGRFQVRYTGPDGSYITAPKTFAAKIDAEAWLTDRRREIDRGLWDVASAKQPERVTFGAY
AAGWLAGRQVAGRPIKARTREHYQAILDDHLLPAFGSRQLTSITPKDVREWYSGTLTNRPTMRSHAYSLLRTIMGSAVND
ELIDANPCRIVGAGRAKRVHKIRPATVEELPILTEAMPERLRLMVALASWCALRFGETIELQRGDIDLADEVIRIRRAAV
RTHGGTFEVTTPKSDAGIRDVAIPPHLVSAIEAHLAKYVGKKRDSLLFPNERGRHLQPSTLNRHWGTKRGPQPAATICVG
TTYGTPAQSWPPPPAPASPNSWPG

Specific function: Integrase is necessary for integration of the phage into the host genome by site-specific recombination. In conjunction with excisionase, integrase is also necessary for excision of the prophage from the host genome [H]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 38242; Mature: 38111

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARDADAKRDKRAFGNIRKLPSGRFQVRYTGPDGSYITAPKTFAAKIDAEAWLTDRRREI
CCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCHHHHHCCHHHHHHHHHHHH
DRGLWDVASAKQPERVTFGAYAAGWLAGRQVAGRPIKARTREHYQAILDDHLLPAFGSRQ
HHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
LTSITPKDVREWYSGTLTNRPTMRSHAYSLLRTIMGSAVNDELIDANPCRIVGAGRAKRV
CCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHH
HKIRPATVEELPILTEAMPERLRLMVALASWCALRFGETIELQRGDIDLADEVIRIRRAA
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHH
VRTHGGTFEVTTPKSDAGIRDVAIPPHLVSAIEAHLAKYVGKKRDSLLFPNERGRHLQPS
HHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCC
TLNRHWGTKRGPQPAATICVGTTYGTPAQSWPPPPAPASPNSWPG
HHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARDADAKRDKRAFGNIRKLPSGRFQVRYTGPDGSYITAPKTFAAKIDAEAWLTDRRREI
CCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCHHHHHCCHHHHHHHHHHHH
DRGLWDVASAKQPERVTFGAYAAGWLAGRQVAGRPIKARTREHYQAILDDHLLPAFGSRQ
HHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
LTSITPKDVREWYSGTLTNRPTMRSHAYSLLRTIMGSAVNDELIDANPCRIVGAGRAKRV
CCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHH
HKIRPATVEELPILTEAMPERLRLMVALASWCALRFGETIELQRGDIDLADEVIRIRRAA
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHH
VRTHGGTFEVTTPKSDAGIRDVAIPPHLVSAIEAHLAKYVGKKRDSLLFPNERGRHLQPS
HHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCC
TLNRHWGTKRGPQPAATICVGTTYGTPAQSWPPPPAPASPNSWPG
HHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]