| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408865
Identifier: 41408865
GI number: 41408865
Start: 3097583
End: 3098134
Strand: Reverse
Name: 41408865
Synonym: MAP2767c
Alternate gene names: NA
Gene position: 3098134-3097583 (Counterclockwise)
Preceding gene: 41408866
Following gene: 41408864
Centisome position: 64.15
GC content: 61.78
Gene sequence:
>552_bases ATGGCCGATGACAACCTCGACTACCTTTTGCCTGAGCAGCGCGAGTGGTGGCTCACGAATGCCGCGATGCCGCCAACACT GGTGCTGCGGTGCGGGATTGGCGGTTGCGGAATATGCGTCGGCATCGTCAAATCCGACAAAACGGATCCCGGTGTCGCTA TCGCGCTCATGCACCACAAGTCCGGCAAGACCACCGTGCCGCACTACGAGCCCATAGACGACGAACGTCTCGCAGCGCTC GGCCTGCCGCCGGCAACAGAACTATATGACGCGAGCGGGATAACTCTAGCCGAGCACATCCAGCGCCGGCAGCGTGAAGT GGACTCCCTGACTATCCGTTCGGTCGATAAGACCCGGCGCGTCTCGAGACGGCATGCGGACCCGTCGGTCGCAATGCCTC TTGAGTGGATCGGCTATATCGTCTGCCCGGATCACGGCACCGTTGCACTACCCGATCCCGCGACCACGGTTGCCGCGATG CGCGGTCAACTGATTCCGACCACACACGCAAAGCGGCGCACGTTCCGTATATTTCGGGGCACTTCCGTGTAG
Upstream 100 bases:
>100_bases CGACGCCACAGGCAGCGATGCGCTACCAGCACGCCGCGCAAGGCCGCGACAAACAGATTGCAGCGCTGCTGTCGAAGATC GCCGAGAACCGGGGGGCCTG
Downstream 100 bases:
>100_bases GCTGCCGGTCAAGCCCCGCGGTGCGCGGAACCCGGATCGCTAGATCGGGACTCGGCTTCGGCAACCGAAACACTCCGAAA GGTTTTGTTTCGTCGTGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MADDNLDYLLPEQREWWLTNAAMPPTLVLRCGIGGCGICVGIVKSDKTDPGVAIALMHHKSGKTTVPHYEPIDDERLAAL GLPPATELYDASGITLAEHIQRRQREVDSLTIRSVDKTRRVSRRHADPSVAMPLEWIGYIVCPDHGTVALPDPATTVAAM RGQLIPTTHAKRRTFRIFRGTSV
Sequences:
>Translated_183_residues MADDNLDYLLPEQREWWLTNAAMPPTLVLRCGIGGCGICVGIVKSDKTDPGVAIALMHHKSGKTTVPHYEPIDDERLAAL GLPPATELYDASGITLAEHIQRRQREVDSLTIRSVDKTRRVSRRHADPSVAMPLEWIGYIVCPDHGTVALPDPATTVAAM RGQLIPTTHAKRRTFRIFRGTSV >Mature_182_residues ADDNLDYLLPEQREWWLTNAAMPPTLVLRCGIGGCGICVGIVKSDKTDPGVAIALMHHKSGKTTVPHYEPIDDERLAALG LPPATELYDASGITLAEHIQRRQREVDSLTIRSVDKTRRVSRRHADPSVAMPLEWIGYIVCPDHGTVALPDPATTVAAMR GQLIPTTHAKRRTFRIFRGTSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20171; Mature: 20040
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: PS00197 2FE2S_FER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDNLDYLLPEQREWWLTNAAMPPTLVLRCGIGGCGICVGIVKSDKTDPGVAIALMHHK CCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCEEEEEEEECCCCCCCEEEEEEEEC SGKTTVPHYEPIDDERLAALGLPPATELYDASGITLAEHIQRRQREVDSLTIRSVDKTRR CCCCCCCCCCCCCCCCEEEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHEEHHHHHHHH VSRRHADPSVAMPLEWIGYIVCPDHGTVALPDPATTVAAMRGQLIPTTHAKRRTFRIFRG HHHHCCCCCCCCCHHHEEEEEECCCCEEECCCCHHHHHHHCCCCCCCCCCCCEEEEEEEC TSV CCC >Mature Secondary Structure ADDNLDYLLPEQREWWLTNAAMPPTLVLRCGIGGCGICVGIVKSDKTDPGVAIALMHHK CCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCEEEEEEEECCCCCCCEEEEEEEEC SGKTTVPHYEPIDDERLAALGLPPATELYDASGITLAEHIQRRQREVDSLTIRSVDKTRR CCCCCCCCCCCCCCCCEEEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHEEHHHHHHHH VSRRHADPSVAMPLEWIGYIVCPDHGTVALPDPATTVAAMRGQLIPTTHAKRRTFRIFRG HHHHCCCCCCCCCHHHEEEEEECCCCEEECCCCHHHHHHHCCCCCCCCCCCCEEEEEEEC TSV CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA