| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408864
Identifier: 41408864
GI number: 41408864
Start: 3096803
End: 3097279
Strand: Reverse
Name: 41408864
Synonym: MAP2766c
Alternate gene names: NA
Gene position: 3097279-3096803 (Counterclockwise)
Preceding gene: 41408865
Following gene: 41408863
Centisome position: 64.13
GC content: 64.57
Gene sequence:
>477_bases GTGACGCAGAACCGAAACGGTCCACCGATAGAAGTCGAGGGCCGAGCCCCGCACCACCGGGACCGACCCTCAACCAGCAA GGTCGGCAGCCACGCAACCGCCTACAACCGCACGACTGAGCTTACTGCACCGTCGGCAGAAACGCCGGGTACAACCAATT CCCGGCAAGTGTCGTGGTGGGAAACTCATCAGTTCATCGAAGCGCTAATCACGCAGGCGAATACCGGCCCCTTGCCGCCG GCGGGCACACCGGCCTGGTCGGCACTGGCTGATGGCGATCCGCGGAAGTTGCTCGCCTTAGCTGTCGCGGGGGAGCATCA TGTCCTGCGCGTCGAGACAGCTCAAACGGCCATGGCTGAAGCGTCCCAGGCGGTTTCGGCTGCGGCGGACTGGACTCGCA TCGGGCGACGGAACCGGGACCACGAGGATATCCATCGGCAGCGGCCATGGTTGCGGCGCAAGGCTCCTCGATGCTAA
Upstream 100 bases:
>100_bases TCGCGGACGGGCGCCTGGCCGGCTATCGCAGCGGCAACCGGCTAGTGCGTGTCGATCTTAATGAGCTCGACGCGGCGATG AAGCCGTTCGGTGGCGCGTC
Downstream 100 bases:
>100_bases CCGCTGCCGATTTCGCCGCGCAATGGGCCGATGTTCCCCCGTGGGAACCGCCGGACGAACCACCGCAGCGAAACGGCCAA CGACAGCAGCAGGCAAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MTQNRNGPPIEVEGRAPHHRDRPSTSKVGSHATAYNRTTELTAPSAETPGTTNSRQVSWWETHQFIEALITQANTGPLPP AGTPAWSALADGDPRKLLALAVAGEHHVLRVETAQTAMAEASQAVSAAADWTRIGRRNRDHEDIHRQRPWLRRKAPRC
Sequences:
>Translated_158_residues MTQNRNGPPIEVEGRAPHHRDRPSTSKVGSHATAYNRTTELTAPSAETPGTTNSRQVSWWETHQFIEALITQANTGPLPP AGTPAWSALADGDPRKLLALAVAGEHHVLRVETAQTAMAEASQAVSAAADWTRIGRRNRDHEDIHRQRPWLRRKAPRC >Mature_157_residues TQNRNGPPIEVEGRAPHHRDRPSTSKVGSHATAYNRTTELTAPSAETPGTTNSRQVSWWETHQFIEALITQANTGPLPPA GTPAWSALADGDPRKLLALAVAGEHHVLRVETAQTAMAEASQAVSAAADWTRIGRRNRDHEDIHRQRPWLRRKAPRC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv2656c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17415; Mature: 17284
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQNRNGPPIEVEGRAPHHRDRPSTSKVGSHATAYNRTTELTAPSAETPGTTNSRQVSWW CCCCCCCCCEEECCCCCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCEEHHH ETHQFIEALITQANTGPLPPAGTPAWSALADGDPRKLLALAVAGEHHVLRVETAQTAMAE HHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCHHHEEEEEECCCCEEEEEHHHHHHHHH ASQAVSAAADWTRIGRRNRDHEDIHRQRPWLRRKAPRC HHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHCCCCC >Mature Secondary Structure TQNRNGPPIEVEGRAPHHRDRPSTSKVGSHATAYNRTTELTAPSAETPGTTNSRQVSWW CCCCCCCCEEECCCCCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCEEHHH ETHQFIEALITQANTGPLPPAGTPAWSALADGDPRKLLALAVAGEHHVLRVETAQTAMAE HHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCHHHEEEEEECCCCEEEEEHHHHHHHHH ASQAVSAAADWTRIGRRNRDHEDIHRQRPWLRRKAPRC HHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]